RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 EEA1Q15075 1411 aa42.36■■■■■ 4.37
PAXBP1-206ENST00000464256 ARHGEF11O15085 1522 aa42.36■■■■■ 4.37
PAXBP1-206ENST00000464256 SHROOM2Q13796 1616 aa42.25■■■■■ 4.35
PAXBP1-206ENST00000464256 ERCC6L2Q5T890 1561 aa42.23■■■■■ 4.35
PAXBP1-206ENST00000464256 KIAA0586Q9BVV6 1533 aa42.19■■■■■ 4.35
PAXBP1-206ENST00000464256 CTTNBP2Q8WZ74 1663 aa42.12■■■■■ 4.33
PAXBP1-206ENST00000464256 JPH4Q96JJ6 628 aa42.09■■■■■ 4.33
PAXBP1-206ENST00000464256 IQGAP2Q13576 1575 aa42.09■■■■■ 4.33
PAXBP1-206ENST00000464256 ARAP1Q96P48 1450 aa42.08■■■■■ 4.33
PAXBP1-206ENST00000464256 KIF21BO75037 1637 aa42.07■■■■■ 4.33
PAXBP1-206ENST00000464256 PRG4Q92954 1404 aaPredicted RBP42.04■■■■■ 4.32
PAXBP1-206ENST00000464256 EHMT2Q96KQ7 1210 aa42.03■■■■■ 4.32
PAXBP1-206ENST00000464256 CYB5RLQ6IPT4 315 aa41.93■■■■■ 4.3
PAXBP1-206ENST00000464256 UGGT2Q9NYU1 1516 aa41.83■■■■■ 4.29
PAXBP1-206ENST00000464256 DISP1Q96F81 1524 aa41.81■■■■■ 4.28
PAXBP1-206ENST00000464256 GOLGA3Q08378 1498 aa41.8■■■■■ 4.28
PAXBP1-206ENST00000464256 KIAA0556O60303 1618 aa41.71■■■■■ 4.27
PAXBP1-206ENST00000464256 UBTFP17480 764 aaKnown RBP41.67■■■■■ 4.26
PAXBP1-206ENST00000464256 CARMIL2Q6F5E8 1435 aa41.66■■■■■ 4.26
PAXBP1-206ENST00000464256 TTBK1Q5TCY1 1321 aaPredicted RBP41.65■■■■■ 4.26
PAXBP1-206ENST00000464256 RANGAP1P46060 587 aaPredicted RBP41.64■■■■■ 4.26
PAXBP1-206ENST00000464256 TNIKQ9UKE5 1360 aa41.56■■■■■ 4.24
PAXBP1-206ENST00000464256 SAMD9Q5K651 1589 aa41.55■■■■■ 4.24
PAXBP1-206ENST00000464256 PTPRGP23470 1445 aa41.52■■■■■ 4.24
PAXBP1-206ENST00000464256 P3H3Q8IVL6 736 aa41.52■■■■■ 4.24
PAXBP1-206ENST00000464256 ADCY10Q96PN6 1610 aa41.45■■■■■ 4.23
PAXBP1-206ENST00000464256 LOC105371045A0A1W2PR82 267 aa41.37■■■■■ 4.21
PAXBP1-206ENST00000464256 FHOD3Q2V2M9 1422 aa41.35■■■■■ 4.21
PAXBP1-206ENST00000464256 EFCAB5A4FU69 1503 aa41.32■■■■■ 4.2
PAXBP1-206ENST00000464256 PLB1Q6P1J6 1458 aa41.29■■■■■ 4.2
PAXBP1-206ENST00000464256 ARHGAP35Q9NRY4 1499 aa41.29■■■■■ 4.2
PAXBP1-206ENST00000464256 UACAQ9BZF9 1416 aa41.26■■■■■ 4.2
PAXBP1-206ENST00000464256 ABCC2Q92887 1545 aa41.23■■■■■ 4.19
PAXBP1-206ENST00000464256 ABCA8O94911 1581 aa41.22■■■■■ 4.19
PAXBP1-206ENST00000464256 UHRF1BP1LA0JNW5 1464 aa41.18■■■■■ 4.18
PAXBP1-206ENST00000464256 CLIP1P30622 1438 aa41.09■■■■■ 4.17
PAXBP1-206ENST00000464256 RAPGEF6Q8TEU7 1601 aa41.08■■■■■ 4.17
PAXBP1-206ENST00000464256 ZCCHC11Q5TAX3 1644 aaKnown RBP41.07■■■■■ 4.16
PAXBP1-206ENST00000464256 KDM5BQ9UGL1 1544 aa41.03■■■■■ 4.16
PAXBP1-206ENST00000464256 NPM1P06748 294 aaKnown RBP eCLIP41.02■■■■■ 4.16
PAXBP1-206ENST00000464256 CEP162Q5TB80 1403 aa41.02■■■■■ 4.16
PAXBP1-206ENST00000464256 ARID3CA6NKF2 412 aa41.01■■■■■ 4.16
PAXBP1-206ENST00000464256 MAPKBP1O60336 1514 aa40.98■■■■■ 4.15
PAXBP1-206ENST00000464256 NUP153P49790 1475 aaKnown RBP40.93■■■■■ 4.14
PAXBP1-206ENST00000464256 TRHP20396 242 aaPredicted RBP40.93■■■■■ 4.14
PAXBP1-206ENST00000464256 KIF13AQ9H1H9 1805 aa40.9■■■■■ 4.14
PAXBP1-206ENST00000464256 FMN1Q68DA7 1419 aa40.89■■■■■ 4.14
PAXBP1-206ENST00000464256 ATP10BO94823 1461 aa40.87■■■■■ 4.13
PAXBP1-206ENST00000464256 ASXL2Q76L83 1435 aa40.87■■■■■ 4.13
PAXBP1-206ENST00000464256 LRRIQ1Q96JM4 1722 aa40.82■■■■■ 4.13
PAXBP1-206ENST00000464256 PCF11O94913 1555 aaKnown RBP40.82■■■■■ 4.13
PAXBP1-206ENST00000464256 DIP2BQ9P265 1576 aa40.8■■■■■ 4.12
PAXBP1-206ENST00000464256 CDK13Q14004 1512 aaKnown RBP40.76■■■■■ 4.12
PAXBP1-206ENST00000464256 ABCC10Q5T3U5 1492 aa40.76■■■■■ 4.12
PAXBP1-206ENST00000464256 HECW1Q76N89 1606 aa40.76■■■■■ 4.11
PAXBP1-206ENST00000464256 ATP1B4Q9UN42 357 aaPredicted RBP40.75■■■■■ 4.11
PAXBP1-206ENST00000464256 WDR7Q9Y4E6 1490 aa40.7■■■■■ 4.11
PAXBP1-206ENST00000464256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.68■■■■■ 4.1
PAXBP1-206ENST00000464256 HNRNPUL2Q1KMD3 747 aaKnown RBP40.68■■■■■ 4.1
PAXBP1-206ENST00000464256 FAM69CQ0P6D2 419 aa40.67■■■■■ 4.1
PAXBP1-206ENST00000464256 CASKIN1Q8WXD9 1431 aa40.67■■■■■ 4.1
PAXBP1-206ENST00000464256 EPRSP07814 1512 aaKnown RBP40.67■■■■■ 4.1
PAXBP1-206ENST00000464256 FYCO1Q9BQS8 1478 aa40.6■■■■■ 4.09
PAXBP1-206ENST00000464256 TSPOAP1O95153 1857 aa40.59■■■■■ 4.09
PAXBP1-206ENST00000464256 KCNH8Q96L42 1107 aa40.57■■■■■ 4.09
PAXBP1-206ENST00000464256 GLI2P10070 1586 aa40.53■■■■■ 4.08
PAXBP1-206ENST00000464256 MAP3K4Q9Y6R4 1608 aa40.46■■■■■ 4.07
PAXBP1-206ENST00000464256 VPS8Q8N3P4 1428 aa40.46■■■■■ 4.07
PAXBP1-206ENST00000464256 PPRC1Q5VV67 1664 aaKnown RBP40.44■■■■■ 4.06
PAXBP1-206ENST00000464256 CCDC18Q5T9S5 1454 aa40.43■■■■■ 4.06
PAXBP1-206ENST00000464256 PLEKHD1A6NEE1 506 aa40.42■■■■■ 4.06
PAXBP1-206ENST00000464256 MAGI3Q5TCQ9 1506 aa40.41■■■■■ 4.06
PAXBP1-206ENST00000464256 CFAP43Q8NDM7 1665 aa40.37■■■■■ 4.05
PAXBP1-206ENST00000464256 ABCA9Q8IUA7 1624 aa40.35■■■■■ 4.05
PAXBP1-206ENST00000464256 KIF14Q15058 1648 aa40.34■■■■■ 4.05
PAXBP1-206ENST00000464256 TTC37Q6PGP7 1564 aa40.3■■■■■ 4.04
PAXBP1-206ENST00000464256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.29■■■■■ 4.04
PAXBP1-206ENST00000464256 TROQ12816 1431 aaPredicted RBP40.28■■■■■ 4.04
PAXBP1-206ENST00000464256 CD109Q6YHK3 1445 aa40.26■■■■■ 4.04
PAXBP1-206ENST00000464256 CDK11AQ9UQ88 783 aaPredicted RBP40.24■■■■■ 4.03
PAXBP1-206ENST00000464256 TIAM1Q13009 1591 aa40.19■■■■■ 4.02
PAXBP1-206ENST00000464256 MTUS2Q5JR59 1369 aa40.08■■■■■ 4.01
PAXBP1-206ENST00000464256 TEX14Q8IWB6 1497 aa40.07■■■■■ 4.01
PAXBP1-206ENST00000464256 MYO5CQ9NQX4 1742 aa40.07■■■■■ 4.01
PAXBP1-206ENST00000464256 EHBP1L1Q8N3D4 1523 aa40.05■■■■■ 4
PAXBP1-206ENST00000464256 KDM6BO15054 1643 aa40.03■■■■■ 4
PAXBP1-206ENST00000464256 COL17A1Q9UMD9 1497 aaPredicted RBP40.01■■■■■ 4
PAXBP1-206ENST00000464256 KANK4Q5T7N3 995 aaPredicted RBP40■■■■□ 3.99
PAXBP1-206ENST00000464256 CDC42BPAQ5VT25 1732 aa40■■■■□ 3.99
PAXBP1-206ENST00000464256 CDC42BPBQ9Y5S2 1711 aa39.99■■■■□ 3.99
PAXBP1-206ENST00000464256 MAP3K1Q13233 1512 aa39.98■■■■□ 3.99
PAXBP1-206ENST00000464256 LRRC9Q6ZRR7 1453 aa39.98■■■■□ 3.99
PAXBP1-206ENST00000464256 PLCH2O75038 1416 aa39.95■■■■□ 3.99
PAXBP1-206ENST00000464256 PREX2Q70Z35 1606 aa39.93■■■■□ 3.98
PAXBP1-206ENST00000464256 FANCAO15360 1455 aa39.92■■■■□ 3.98
PAXBP1-206ENST00000464256 SUPT6HQ7KZ85 1726 aaKnown RBP39.9■■■■□ 3.98
PAXBP1-206ENST00000464256 NEO1Q92859 1461 aa39.87■■■■□ 3.97
PAXBP1-206ENST00000464256 ARHGAP5Q13017 1502 aa39.86■■■■□ 3.97
PAXBP1-206ENST00000464256 NCOA2Q15596 1464 aa39.85■■■■□ 3.97
PAXBP1-206ENST00000464256 GPATCH8Q9UKJ3 1502 aaKnown RBP39.85■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms