RNA–Protein interactions for RNA: ENST00000464050.5

COMMD6-207, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-207ENST00000464050 ERCC6L2Q5T890 1561 aa22.99■■□□□ 1.27
COMMD6-207ENST00000464050 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
COMMD6-207ENST00000464050 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
COMMD6-207ENST00000464050 KIAA0586Q9BVV6 1533 aa22.92■■□□□ 1.26
COMMD6-207ENST00000464050 RAPGEF2Q9Y4G8 1499 aa22.84■■□□□ 1.25
COMMD6-207ENST00000464050 IQGAP2Q13576 1575 aa22.79■■□□□ 1.24
COMMD6-207ENST00000464050 CARMIL2Q6F5E8 1435 aa22.77■■□□□ 1.24
COMMD6-207ENST00000464050 NPM1P06748 294 aaKnown RBP eCLIP22.75■■□□□ 1.23
COMMD6-207ENST00000464050 TTBK1Q5TCY1 1321 aaPredicted RBP22.75■■□□□ 1.23
COMMD6-207ENST00000464050 PTPRGP23470 1445 aa22.69■■□□□ 1.22
COMMD6-207ENST00000464050 TNIKQ9UKE5 1360 aa22.67■■□□□ 1.22
COMMD6-207ENST00000464050 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
COMMD6-207ENST00000464050 ADCY10Q96PN6 1610 aa22.63■■□□□ 1.21
COMMD6-207ENST00000464050 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
COMMD6-207ENST00000464050 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
COMMD6-207ENST00000464050 EEA1Q15075 1411 aa22.6■■□□□ 1.21
COMMD6-207ENST00000464050 CSRNP3Q8WYN3 585 aa22.6■■□□□ 1.21
COMMD6-207ENST00000464050 DISP1Q96F81 1524 aa22.57■■□□□ 1.2
COMMD6-207ENST00000464050 KIAA0556O60303 1618 aa22.56■■□□□ 1.2
COMMD6-207ENST00000464050 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
COMMD6-207ENST00000464050 FAM9AQ8IZU1 332 aaPredicted RBP22.55■■□□□ 1.2
COMMD6-207ENST00000464050 MAPKBP1O60336 1514 aa22.54■■□□□ 1.2
COMMD6-207ENST00000464050 UACAQ9BZF9 1416 aa22.51■■□□□ 1.19
COMMD6-207ENST00000464050 FAM69CQ0P6D2 419 aa22.51■■□□□ 1.19
COMMD6-207ENST00000464050 KIF13AQ9H1H9 1805 aa22.5■■□□□ 1.19
COMMD6-207ENST00000464050 ABCC2Q92887 1545 aa22.49■■□□□ 1.19
COMMD6-207ENST00000464050 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
COMMD6-207ENST00000464050 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
COMMD6-207ENST00000464050 UHRF1BP1LA0JNW5 1464 aa22.46■■□□□ 1.19
COMMD6-207ENST00000464050 DIP2BQ9P265 1576 aa22.43■■□□□ 1.18
COMMD6-207ENST00000464050 PLB1Q6P1J6 1458 aa22.4■■□□□ 1.18
COMMD6-207ENST00000464050 ASXL2Q76L83 1435 aa22.39■■□□□ 1.17
COMMD6-207ENST00000464050 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
COMMD6-207ENST00000464050 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
COMMD6-207ENST00000464050 KIF21BO75037 1637 aa22.35■■□□□ 1.17
COMMD6-207ENST00000464050 KDM5BQ9UGL1 1544 aa22.35■■□□□ 1.17
COMMD6-207ENST00000464050 TSPOAP1O95153 1857 aa22.34■■□□□ 1.17
COMMD6-207ENST00000464050 ZCCHC11Q5TAX3 1644 aaKnown RBP22.34■■□□□ 1.17
COMMD6-207ENST00000464050 EHMT2Q96KQ7 1210 aa22.32■■□□□ 1.16
COMMD6-207ENST00000464050 ABCA8O94911 1581 aa22.29■■□□□ 1.16
COMMD6-207ENST00000464050 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
COMMD6-207ENST00000464050 SAMD9Q5K651 1589 aa22.28■■□□□ 1.16
COMMD6-207ENST00000464050 GLI2P10070 1586 aa22.25■■□□□ 1.15
COMMD6-207ENST00000464050 WDR7Q9Y4E6 1490 aa22.24■■□□□ 1.15
COMMD6-207ENST00000464050 EPRSP07814 1512 aaKnown RBP22.23■■□□□ 1.15
COMMD6-207ENST00000464050 ARID3CA6NKF2 412 aa22.23■■□□□ 1.15
COMMD6-207ENST00000464050 KDM6BO15054 1643 aa22.21■■□□□ 1.15
COMMD6-207ENST00000464050 FHOD3Q2V2M9 1422 aa22.2■■□□□ 1.14
COMMD6-207ENST00000464050 EFCAB5A4FU69 1503 aa22.2■■□□□ 1.14
COMMD6-207ENST00000464050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.19■■□□□ 1.14
COMMD6-207ENST00000464050 HNRNPUL2Q1KMD3 747 aaKnown RBP22.19■■□□□ 1.14
COMMD6-207ENST00000464050 RAPGEF6Q8TEU7 1601 aa22.18■■□□□ 1.14
COMMD6-207ENST00000464050 KCNH8Q96L42 1107 aa22.18■■□□□ 1.14
COMMD6-207ENST00000464050 TEX14Q8IWB6 1497 aa22.15■■□□□ 1.14
COMMD6-207ENST00000464050 MAP3K4Q9Y6R4 1608 aa22.13■■□□□ 1.13
COMMD6-207ENST00000464050 AEBP2Q6ZN18 517 aaPredicted RBP22.12■■□□□ 1.13
COMMD6-207ENST00000464050 PPRC1Q5VV67 1664 aaKnown RBP22.11■■□□□ 1.13
COMMD6-207ENST00000464050 ATP10BO94823 1461 aa22.1■■□□□ 1.13
COMMD6-207ENST00000464050 CFAP43Q8NDM7 1665 aa22.07■■□□□ 1.12
COMMD6-207ENST00000464050 CD109Q6YHK3 1445 aa22.07■■□□□ 1.12
COMMD6-207ENST00000464050 NUP153P49790 1475 aaKnown RBP22.05■■□□□ 1.12
COMMD6-207ENST00000464050 ATP1B4Q9UN42 357 aaPredicted RBP22.03■■□□□ 1.12
COMMD6-207ENST00000464050 FMN1Q68DA7 1419 aa22.02■■□□□ 1.12
COMMD6-207ENST00000464050 PLEKHD1A6NEE1 506 aa22■■□□□ 1.11
COMMD6-207ENST00000464050 MAGI3Q5TCQ9 1506 aa22■■□□□ 1.11
COMMD6-207ENST00000464050 ARHGAP35Q9NRY4 1499 aa21.99■■□□□ 1.11
COMMD6-207ENST00000464050 HECW1Q76N89 1606 aa21.95■■□□□ 1.1
COMMD6-207ENST00000464050 ABCA9Q8IUA7 1624 aa21.94■■□□□ 1.1
COMMD6-207ENST00000464050 CDK13Q14004 1512 aaKnown RBP21.9■■□□□ 1.1
COMMD6-207ENST00000464050 COL17A1Q9UMD9 1497 aaPredicted RBP21.9■■□□□ 1.1
COMMD6-207ENST00000464050 CDK11AQ9UQ88 783 aaPredicted RBP21.89■■□□□ 1.09
COMMD6-207ENST00000464050 CLIP1P30622 1438 aa21.85■■□□□ 1.09
COMMD6-207ENST00000464050 PHLDB1Q86UU1 1377 aa21.85■■□□□ 1.09
COMMD6-207ENST00000464050 NEO1Q92859 1461 aa21.82■■□□□ 1.08
COMMD6-207ENST00000464050 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
COMMD6-207ENST00000464050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.78■■□□□ 1.08
COMMD6-207ENST00000464050 PCF11O94913 1555 aaKnown RBP21.78■■□□□ 1.08
COMMD6-207ENST00000464050 CFAP74Q9C0B2 1584 aa21.78■■□□□ 1.08
COMMD6-207ENST00000464050 CASKIN1Q8WXD9 1431 aa21.77■■□□□ 1.08
COMMD6-207ENST00000464050 TTC37Q6PGP7 1564 aa21.77■■□□□ 1.08
COMMD6-207ENST00000464050 CCDC18Q5T9S5 1454 aa21.76■■□□□ 1.07
COMMD6-207ENST00000464050 FANCAO15360 1455 aa21.75■■□□□ 1.07
COMMD6-207ENST00000464050 KIF14Q15058 1648 aa21.74■■□□□ 1.07
COMMD6-207ENST00000464050 TROQ12816 1431 aaPredicted RBP21.73■■□□□ 1.07
COMMD6-207ENST00000464050 KDM4FA0A1W2PPD8 638 aa21.73■■□□□ 1.07
COMMD6-207ENST00000464050 ADGRL1O94910 1474 aa21.72■■□□□ 1.07
COMMD6-207ENST00000464050 FYCO1Q9BQS8 1478 aa21.72■■□□□ 1.07
COMMD6-207ENST00000464050 RAPGEF3O95398 923 aa21.72■■□□□ 1.07
COMMD6-207ENST00000464050 AKNAQ7Z591 1439 aa21.71■■□□□ 1.07
COMMD6-207ENST00000464050 DENND4BO75064 1496 aaPredicted RBP21.7■■□□□ 1.06
COMMD6-207ENST00000464050 LRRIQ1Q96JM4 1722 aa21.69■■□□□ 1.06
COMMD6-207ENST00000464050 MYO5CQ9NQX4 1742 aa21.69■■□□□ 1.06
COMMD6-207ENST00000464050 CEP162Q5TB80 1403 aa21.67■■□□□ 1.06
COMMD6-207ENST00000464050 PLCH2O75038 1416 aa21.66■■□□□ 1.06
COMMD6-207ENST00000464050 EFCAB2Q5VUJ9 269 aa21.66■■□□□ 1.06
COMMD6-207ENST00000464050 ARHGAP5Q13017 1502 aa21.64■■□□□ 1.05
COMMD6-207ENST00000464050 FRMPD1Q5SYB0 1578 aa21.62■■□□□ 1.05
COMMD6-207ENST00000464050 ARID4BQ4LE39 1312 aaPredicted RBP21.61■■□□□ 1.05
COMMD6-207ENST00000464050 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
COMMD6-207ENST00000464050 RICTORQ6R327 1708 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms