RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 PRG4Q92954 1404 aaPredicted RBP30.49■■■□□ 2.47
COL5A1-204ENST00000463925 JPH4Q96JJ6 628 aa30.47■■■□□ 2.47
COL5A1-204ENST00000463925 KIAA0586Q9BVV6 1533 aa30.39■■■□□ 2.46
COL5A1-204ENST00000463925 CARMIL1Q5VZK9 1371 aa30.31■■■□□ 2.44
COL5A1-204ENST00000463925 ADCY10Q96PN6 1610 aa30.14■■■□□ 2.42
COL5A1-204ENST00000463925 IQGAP2Q13576 1575 aa30.12■■■□□ 2.41
COL5A1-204ENST00000463925 MAPKBP1O60336 1514 aa30.12■■■□□ 2.41
COL5A1-204ENST00000463925 KIF13AQ9H1H9 1805 aa30.11■■■□□ 2.41
COL5A1-204ENST00000463925 RAPGEF2Q9Y4G8 1499 aa30.08■■■□□ 2.41
COL5A1-204ENST00000463925 CARMIL2Q6F5E8 1435 aa30.07■■■□□ 2.4
COL5A1-204ENST00000463925 NPM1P06748 294 aaKnown RBP eCLIP30.07■■■□□ 2.4
COL5A1-204ENST00000463925 ABCC10Q5T3U5 1492 aa30.05■■■□□ 2.4
COL5A1-204ENST00000463925 PTPRGP23470 1445 aa30.04■■■□□ 2.4
COL5A1-204ENST00000463925 TNIKQ9UKE5 1360 aa30.03■■■□□ 2.4
COL5A1-204ENST00000463925 DIP2BQ9P265 1576 aa29.98■■■□□ 2.39
COL5A1-204ENST00000463925 DISP1Q96F81 1524 aa29.96■■■□□ 2.39
COL5A1-204ENST00000463925 UGGT2Q9NYU1 1516 aa29.96■■■□□ 2.39
COL5A1-204ENST00000463925 FAM69CQ0P6D2 419 aa29.94■■■□□ 2.38
COL5A1-204ENST00000463925 ABCC2Q92887 1545 aa29.9■■■□□ 2.38
COL5A1-204ENST00000463925 UHRF1BP1LA0JNW5 1464 aa29.88■■■□□ 2.37
COL5A1-204ENST00000463925 TTBK1Q5TCY1 1321 aaPredicted RBP29.86■■■□□ 2.37
COL5A1-204ENST00000463925 KIAA0556O60303 1618 aa29.85■■■□□ 2.37
COL5A1-204ENST00000463925 UACAQ9BZF9 1416 aa29.84■■■□□ 2.37
COL5A1-204ENST00000463925 PRXQ9BXM0 1461 aa29.84■■■□□ 2.37
COL5A1-204ENST00000463925 CTTNBP2Q8WZ74 1663 aa29.83■■■□□ 2.37
COL5A1-204ENST00000463925 PLB1Q6P1J6 1458 aa29.76■■■□□ 2.35
COL5A1-204ENST00000463925 ASXL2Q76L83 1435 aa29.75■■■□□ 2.35
COL5A1-204ENST00000463925 KDM5BQ9UGL1 1544 aa29.73■■■□□ 2.35
COL5A1-204ENST00000463925 GOLGA3Q08378 1498 aa29.71■■■□□ 2.35
COL5A1-204ENST00000463925 GLI2P10070 1586 aa29.69■■■□□ 2.34
COL5A1-204ENST00000463925 TSPOAP1O95153 1857 aa29.68■■■□□ 2.34
COL5A1-204ENST00000463925 KDM6BO15054 1643 aa29.65■■■□□ 2.34
COL5A1-204ENST00000463925 ZCCHC11Q5TAX3 1644 aaKnown RBP29.64■■■□□ 2.34
COL5A1-204ENST00000463925 AEBP2Q6ZN18 517 aaPredicted RBP29.64■■■□□ 2.34
COL5A1-204ENST00000463925 EPRSP07814 1512 aaKnown RBP29.59■■■□□ 2.33
COL5A1-204ENST00000463925 CSRNP3Q8WYN3 585 aa29.58■■■□□ 2.33
COL5A1-204ENST00000463925 PPRC1Q5VV67 1664 aaKnown RBP29.57■■■□□ 2.32
COL5A1-204ENST00000463925 ABCA8O94911 1581 aa29.57■■■□□ 2.32
COL5A1-204ENST00000463925 EEA1Q15075 1411 aa29.57■■■□□ 2.32
COL5A1-204ENST00000463925 MAP3K4Q9Y6R4 1608 aa29.52■■■□□ 2.32
COL5A1-204ENST00000463925 WDR7Q9Y4E6 1490 aa29.51■■■□□ 2.31
COL5A1-204ENST00000463925 SAMD9Q5K651 1589 aa29.44■■■□□ 2.3
COL5A1-204ENST00000463925 TEX14Q8IWB6 1497 aa29.43■■■□□ 2.3
COL5A1-204ENST00000463925 FAM9AQ8IZU1 332 aaPredicted RBP29.36■■■□□ 2.29
COL5A1-204ENST00000463925 P3H3Q8IVL6 736 aa29.34■■■□□ 2.29
COL5A1-204ENST00000463925 COL17A1Q9UMD9 1497 aaPredicted RBP29.33■■■□□ 2.29
COL5A1-204ENST00000463925 CFAP43Q8NDM7 1665 aa29.33■■■□□ 2.29
COL5A1-204ENST00000463925 KIF21BO75037 1637 aa29.31■■■□□ 2.28
COL5A1-204ENST00000463925 MAGI3Q5TCQ9 1506 aa29.3■■■□□ 2.28
COL5A1-204ENST00000463925 ATP10BO94823 1461 aa29.29■■■□□ 2.28
COL5A1-204ENST00000463925 CD109Q6YHK3 1445 aa29.28■■■□□ 2.28
COL5A1-204ENST00000463925 RAPGEF6Q8TEU7 1601 aa29.27■■■□□ 2.28
COL5A1-204ENST00000463925 KCNH8Q96L42 1107 aa29.25■■■□□ 2.27
COL5A1-204ENST00000463925 KDM4FA0A1W2PPD8 638 aa29.23■■■□□ 2.27
COL5A1-204ENST00000463925 FHOD3Q2V2M9 1422 aa29.2■■■□□ 2.27
COL5A1-204ENST00000463925 ARID3CA6NKF2 412 aa29.2■■■□□ 2.26
COL5A1-204ENST00000463925 EFCAB5A4FU69 1503 aa29.19■■■□□ 2.26
COL5A1-204ENST00000463925 NUP153P49790 1475 aaKnown RBP29.17■■■□□ 2.26
COL5A1-204ENST00000463925 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
COL5A1-204ENST00000463925 ABCA9Q8IUA7 1624 aa29.15■■■□□ 2.26
COL5A1-204ENST00000463925 RANGAP1P46060 587 aaPredicted RBP29.13■■■□□ 2.25
COL5A1-204ENST00000463925 ADGRL1O94910 1474 aa29.08■■■□□ 2.25
COL5A1-204ENST00000463925 ARAP3Q8WWN8 1544 aa29.06■■■□□ 2.24
COL5A1-204ENST00000463925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.04■■■□□ 2.24
COL5A1-204ENST00000463925 HNRNPUL2Q1KMD3 747 aaKnown RBP29.04■■■□□ 2.24
COL5A1-204ENST00000463925 PHLDB1Q86UU1 1377 aa29.02■■■□□ 2.24
COL5A1-204ENST00000463925 NEO1Q92859 1461 aa28.98■■■□□ 2.23
COL5A1-204ENST00000463925 UBTFP17480 764 aaKnown RBP28.98■■■□□ 2.23
COL5A1-204ENST00000463925 PLEKHD1A6NEE1 506 aa28.94■■■□□ 2.22
COL5A1-204ENST00000463925 ARHGAP35Q9NRY4 1499 aa28.91■■■□□ 2.22
COL5A1-204ENST00000463925 FMN1Q68DA7 1419 aa28.91■■■□□ 2.22
COL5A1-204ENST00000463925 EHMT2Q96KQ7 1210 aa28.9■■■□□ 2.22
COL5A1-204ENST00000463925 CDK13Q14004 1512 aaKnown RBP28.88■■■□□ 2.21
COL5A1-204ENST00000463925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.86■■■□□ 2.21
COL5A1-204ENST00000463925 HECW1Q76N89 1606 aa28.86■■■□□ 2.21
COL5A1-204ENST00000463925 FRMPD1Q5SYB0 1578 aa28.84■■■□□ 2.21
COL5A1-204ENST00000463925 TTC37Q6PGP7 1564 aa28.82■■■□□ 2.2
COL5A1-204ENST00000463925 CFAP74Q9C0B2 1584 aa28.81■■■□□ 2.2
COL5A1-204ENST00000463925 RAPGEF3O95398 923 aa28.81■■■□□ 2.2
COL5A1-204ENST00000463925 FANCAO15360 1455 aa28.79■■■□□ 2.2
COL5A1-204ENST00000463925 AKNAQ7Z591 1439 aa28.76■■■□□ 2.19
COL5A1-204ENST00000463925 DENND4BO75064 1496 aaPredicted RBP28.75■■■□□ 2.19
COL5A1-204ENST00000463925 RICTORQ6R327 1708 aa28.73■■■□□ 2.19
COL5A1-204ENST00000463925 ATP1B4Q9UN42 357 aaPredicted RBP28.7■■■□□ 2.18
COL5A1-204ENST00000463925 ARHGEF40Q8TER5 1519 aa28.69■■■□□ 2.18
COL5A1-204ENST00000463925 PLCH2O75038 1416 aa28.69■■■□□ 2.18
COL5A1-204ENST00000463925 CDK11AQ9UQ88 783 aaPredicted RBP28.68■■■□□ 2.18
COL5A1-204ENST00000463925 ZMYM4Q5VZL5 1548 aa28.66■■■□□ 2.18
COL5A1-204ENST00000463925 ADAMTSL3P82987 1691 aa28.65■■■□□ 2.18
COL5A1-204ENST00000463925 TROQ12816 1431 aaPredicted RBP28.65■■■□□ 2.18
COL5A1-204ENST00000463925 LRRIQ1Q96JM4 1722 aa28.63■■■□□ 2.17
COL5A1-204ENST00000463925 HECW2Q9P2P5 1572 aa28.63■■■□□ 2.17
COL5A1-204ENST00000463925 KIF14Q15058 1648 aa28.63■■■□□ 2.17
COL5A1-204ENST00000463925 MYO5CQ9NQX4 1742 aa28.62■■■□□ 2.17
COL5A1-204ENST00000463925 PCF11O94913 1555 aaKnown RBP28.61■■■□□ 2.17
COL5A1-204ENST00000463925 CASKIN1Q8WXD9 1431 aa28.6■■■□□ 2.17
COL5A1-204ENST00000463925 BCORL1Q5H9F3 1711 aa28.6■■■□□ 2.17
COL5A1-204ENST00000463925 CLIP1P30622 1438 aa28.6■■■□□ 2.17
COL5A1-204ENST00000463925 POGZQ7Z3K3 1410 aa28.58■■■□□ 2.17
COL5A1-204ENST00000463925 CCDC18Q5T9S5 1454 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms