RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 JPH4Q96JJ6 628 aa22.13■■□□□ 1.13
XRN1-203ENST00000463916 PRG4Q92954 1404 aaPredicted RBP22.08■■□□□ 1.13
XRN1-203ENST00000463916 KIAA0586Q9BVV6 1533 aa22.05■■□□□ 1.12
XRN1-203ENST00000463916 RAPGEF2Q9Y4G8 1499 aa21.98■■□□□ 1.11
XRN1-203ENST00000463916 TRHP20396 242 aaPredicted RBP21.92■■□□□ 1.1
XRN1-203ENST00000463916 IQGAP2Q13576 1575 aa21.89■■□□□ 1.1
XRN1-203ENST00000463916 PRXQ9BXM0 1461 aa21.89■■□□□ 1.09
XRN1-203ENST00000463916 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
XRN1-203ENST00000463916 CSRNP3Q8WYN3 585 aa21.84■■□□□ 1.09
XRN1-203ENST00000463916 DISP1Q96F81 1524 aa21.8■■□□□ 1.08
XRN1-203ENST00000463916 TTBK1Q5TCY1 1321 aaPredicted RBP21.8■■□□□ 1.08
XRN1-203ENST00000463916 CARMIL2Q6F5E8 1435 aa21.79■■□□□ 1.08
XRN1-203ENST00000463916 FAM9AQ8IZU1 332 aaPredicted RBP21.78■■□□□ 1.08
XRN1-203ENST00000463916 PTPRGP23470 1445 aa21.78■■□□□ 1.08
XRN1-203ENST00000463916 UGGT2Q9NYU1 1516 aa21.78■■□□□ 1.08
XRN1-203ENST00000463916 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.07
XRN1-203ENST00000463916 ADCY10Q96PN6 1610 aa21.76■■□□□ 1.07
XRN1-203ENST00000463916 CTTNBP2Q8WZ74 1663 aa21.75■■□□□ 1.07
XRN1-203ENST00000463916 EEA1Q15075 1411 aa21.75■■□□□ 1.07
XRN1-203ENST00000463916 KIAA0556O60303 1618 aa21.69■■□□□ 1.06
XRN1-203ENST00000463916 NPM1P06748 294 aaKnown RBP eCLIP21.68■■□□□ 1.06
XRN1-203ENST00000463916 MAPKBP1O60336 1514 aa21.62■■□□□ 1.05
XRN1-203ENST00000463916 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
XRN1-203ENST00000463916 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
XRN1-203ENST00000463916 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
XRN1-203ENST00000463916 KIF13AQ9H1H9 1805 aa21.6■■□□□ 1.05
XRN1-203ENST00000463916 UHRF1BP1LA0JNW5 1464 aa21.6■■□□□ 1.05
XRN1-203ENST00000463916 ABCC10Q5T3U5 1492 aa21.57■■□□□ 1.04
XRN1-203ENST00000463916 P3H3Q8IVL6 736 aa21.57■■□□□ 1.04
XRN1-203ENST00000463916 KIF21BO75037 1637 aa21.56■■□□□ 1.04
XRN1-203ENST00000463916 FAM69CQ0P6D2 419 aa21.56■■□□□ 1.04
XRN1-203ENST00000463916 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
XRN1-203ENST00000463916 PLB1Q6P1J6 1458 aa21.55■■□□□ 1.04
XRN1-203ENST00000463916 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
XRN1-203ENST00000463916 DIP2BQ9P265 1576 aa21.52■■□□□ 1.04
XRN1-203ENST00000463916 KDM5BQ9UGL1 1544 aa21.51■■□□□ 1.03
XRN1-203ENST00000463916 SAMD9Q5K651 1589 aa21.5■■□□□ 1.03
XRN1-203ENST00000463916 ASXL2Q76L83 1435 aa21.5■■□□□ 1.03
XRN1-203ENST00000463916 ABCA8O94911 1581 aa21.48■■□□□ 1.03
XRN1-203ENST00000463916 ZCCHC11Q5TAX3 1644 aaKnown RBP21.46■■□□□ 1.03
XRN1-203ENST00000463916 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
XRN1-203ENST00000463916 FHOD3Q2V2M9 1422 aa21.4■■□□□ 1.02
XRN1-203ENST00000463916 ARID3CA6NKF2 412 aa21.38■■□□□ 1.01
XRN1-203ENST00000463916 TSPOAP1O95153 1857 aa21.37■■□□□ 1.01
XRN1-203ENST00000463916 EPRSP07814 1512 aaKnown RBP21.36■■□□□ 1.01
XRN1-203ENST00000463916 GLI2P10070 1586 aa21.35■■□□□ 1.01
XRN1-203ENST00000463916 ATP10BO94823 1461 aa21.34■■□□□ 1.01
XRN1-203ENST00000463916 WDR7Q9Y4E6 1490 aa21.34■■□□□ 1.01
XRN1-203ENST00000463916 EFCAB5A4FU69 1503 aa21.33■■□□□ 1.01
XRN1-203ENST00000463916 RAPGEF6Q8TEU7 1601 aa21.31■■□□□ 1
XRN1-203ENST00000463916 KCNH8Q96L42 1107 aa21.29■■□□□ 1
XRN1-203ENST00000463916 PPRC1Q5VV67 1664 aaKnown RBP21.29■■□□□ 1
XRN1-203ENST00000463916 NUP153P49790 1475 aaKnown RBP21.28■■□□□ 1
XRN1-203ENST00000463916 ARHGAP35Q9NRY4 1499 aa21.27■■□□□ 1
XRN1-203ENST00000463916 MAP3K4Q9Y6R4 1608 aa21.27■□□□□ 0.99
XRN1-203ENST00000463916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
XRN1-203ENST00000463916 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
XRN1-203ENST00000463916 KDM6BO15054 1643 aa21.21■□□□□ 0.99
XRN1-203ENST00000463916 CD109Q6YHK3 1445 aa21.18■□□□□ 0.98
XRN1-203ENST00000463916 COL17A1Q9UMD9 1497 aaPredicted RBP21.16■□□□□ 0.98
XRN1-203ENST00000463916 FMN1Q68DA7 1419 aa21.15■□□□□ 0.98
XRN1-203ENST00000463916 CFAP43Q8NDM7 1665 aa21.15■□□□□ 0.98
XRN1-203ENST00000463916 TEX14Q8IWB6 1497 aa21.14■□□□□ 0.97
XRN1-203ENST00000463916 CDK13Q14004 1512 aaKnown RBP21.12■□□□□ 0.97
XRN1-203ENST00000463916 MAGI3Q5TCQ9 1506 aa21.12■□□□□ 0.97
XRN1-203ENST00000463916 ATP1B4Q9UN42 357 aaPredicted RBP21.12■□□□□ 0.97
XRN1-203ENST00000463916 PLEKHD1A6NEE1 506 aa21.11■□□□□ 0.97
XRN1-203ENST00000463916 ABCA9Q8IUA7 1624 aa21.09■□□□□ 0.97
XRN1-203ENST00000463916 CLIP1P30622 1438 aa21.07■□□□□ 0.96
XRN1-203ENST00000463916 HECW1Q76N89 1606 aa21.05■□□□□ 0.96
XRN1-203ENST00000463916 LRRIQ1Q96JM4 1722 aa21.02■□□□□ 0.96
XRN1-203ENST00000463916 LOC105371045A0A1W2PR82 267 aa21.01■□□□□ 0.95
XRN1-203ENST00000463916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21■□□□□ 0.95
XRN1-203ENST00000463916 CASKIN1Q8WXD9 1431 aa21■□□□□ 0.95
XRN1-203ENST00000463916 PCF11O94913 1555 aaKnown RBP20.99■□□□□ 0.95
XRN1-203ENST00000463916 TTC37Q6PGP7 1564 aa20.97■□□□□ 0.95
XRN1-203ENST00000463916 ARAP3Q8WWN8 1544 aa20.95■□□□□ 0.95
XRN1-203ENST00000463916 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
XRN1-203ENST00000463916 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
XRN1-203ENST00000463916 NEO1Q92859 1461 aa20.93■□□□□ 0.94
XRN1-203ENST00000463916 FYCO1Q9BQS8 1478 aa20.91■□□□□ 0.94
XRN1-203ENST00000463916 PHLDB1Q86UU1 1377 aa20.91■□□□□ 0.94
XRN1-203ENST00000463916 RAPGEF3O95398 923 aa20.91■□□□□ 0.94
XRN1-203ENST00000463916 AEBP2Q6ZN18 517 aaPredicted RBP20.91■□□□□ 0.94
XRN1-203ENST00000463916 TROQ12816 1431 aaPredicted RBP20.91■□□□□ 0.94
XRN1-203ENST00000463916 KIF14Q15058 1648 aa20.9■□□□□ 0.94
XRN1-203ENST00000463916 KDM4FA0A1W2PPD8 638 aa20.9■□□□□ 0.94
XRN1-203ENST00000463916 CCDC18Q5T9S5 1454 aa20.89■□□□□ 0.93
XRN1-203ENST00000463916 FANCAO15360 1455 aa20.88■□□□□ 0.93
XRN1-203ENST00000463916 PLCH2O75038 1416 aa20.86■□□□□ 0.93
XRN1-203ENST00000463916 AKNAQ7Z591 1439 aa20.86■□□□□ 0.93
XRN1-203ENST00000463916 FRMPD1Q5SYB0 1578 aa20.83■□□□□ 0.93
XRN1-203ENST00000463916 CFAP74Q9C0B2 1584 aa20.8■□□□□ 0.92
XRN1-203ENST00000463916 MYO5CQ9NQX4 1742 aa20.8■□□□□ 0.92
XRN1-203ENST00000463916 DENND4BO75064 1496 aaPredicted RBP20.79■□□□□ 0.92
XRN1-203ENST00000463916 ADGRL1O94910 1474 aa20.78■□□□□ 0.92
XRN1-203ENST00000463916 EFCAB2Q5VUJ9 269 aa20.77■□□□□ 0.92
XRN1-203ENST00000463916 RICTORQ6R327 1708 aa20.77■□□□□ 0.92
XRN1-203ENST00000463916 SCAPERQ9BY12 1400 aa20.75■□□□□ 0.91
XRN1-203ENST00000463916 ARHGAP5Q13017 1502 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms