RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
COMMD3-205ENST00000463688 KIAA0586Q9BVV6 1533 aa22.73■■□□□ 1.23
COMMD3-205ENST00000463688 PRG4Q92954 1404 aaPredicted RBP22.71■■□□□ 1.23
COMMD3-205ENST00000463688 SHROOM2Q13796 1616 aa22.68■■□□□ 1.22
COMMD3-205ENST00000463688 NPM1P06748 294 aaKnown RBP eCLIP22.65■■□□□ 1.22
COMMD3-205ENST00000463688 CARMIL2Q6F5E8 1435 aa22.62■■□□□ 1.21
COMMD3-205ENST00000463688 RAPGEF2Q9Y4G8 1499 aa22.61■■□□□ 1.21
COMMD3-205ENST00000463688 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
COMMD3-205ENST00000463688 FAM9AQ8IZU1 332 aaPredicted RBP22.56■■□□□ 1.2
COMMD3-205ENST00000463688 ERCC6L2Q5T890 1561 aa22.52■■□□□ 1.2
COMMD3-205ENST00000463688 PTPRGP23470 1445 aa22.5■■□□□ 1.19
COMMD3-205ENST00000463688 EEA1Q15075 1411 aa22.5■■□□□ 1.19
COMMD3-205ENST00000463688 TNIKQ9UKE5 1360 aa22.48■■□□□ 1.19
COMMD3-205ENST00000463688 IQGAP2Q13576 1575 aa22.47■■□□□ 1.19
COMMD3-205ENST00000463688 CSRNP3Q8WYN3 585 aa22.45■■□□□ 1.18
COMMD3-205ENST00000463688 PRXQ9BXM0 1461 aa22.4■■□□□ 1.18
COMMD3-205ENST00000463688 GOLGA3Q08378 1498 aa22.38■■□□□ 1.17
COMMD3-205ENST00000463688 UGGT2Q9NYU1 1516 aa22.37■■□□□ 1.17
COMMD3-205ENST00000463688 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
COMMD3-205ENST00000463688 UACAQ9BZF9 1416 aa22.3■■□□□ 1.16
COMMD3-205ENST00000463688 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
COMMD3-205ENST00000463688 UHRF1BP1LA0JNW5 1464 aa22.29■■□□□ 1.16
COMMD3-205ENST00000463688 FAM69CQ0P6D2 419 aa22.29■■□□□ 1.16
COMMD3-205ENST00000463688 DISP1Q96F81 1524 aa22.28■■□□□ 1.16
COMMD3-205ENST00000463688 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
COMMD3-205ENST00000463688 ABCC2Q92887 1545 aa22.25■■□□□ 1.15
COMMD3-205ENST00000463688 ADCY10Q96PN6 1610 aa22.23■■□□□ 1.15
COMMD3-205ENST00000463688 PLB1Q6P1J6 1458 aa22.23■■□□□ 1.15
COMMD3-205ENST00000463688 KIAA0556O60303 1618 aa22.2■■□□□ 1.14
COMMD3-205ENST00000463688 CTTNBP2Q8WZ74 1663 aa22.18■■□□□ 1.14
COMMD3-205ENST00000463688 KDM5BQ9UGL1 1544 aa22.13■■□□□ 1.13
COMMD3-205ENST00000463688 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
COMMD3-205ENST00000463688 DIP2BQ9P265 1576 aa22.08■■□□□ 1.12
COMMD3-205ENST00000463688 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
COMMD3-205ENST00000463688 KIF21BO75037 1637 aa22.04■■□□□ 1.12
COMMD3-205ENST00000463688 P3H3Q8IVL6 736 aa22.02■■□□□ 1.12
COMMD3-205ENST00000463688 GLI2P10070 1586 aa22.02■■□□□ 1.12
COMMD3-205ENST00000463688 KIF13AQ9H1H9 1805 aa22.01■■□□□ 1.11
COMMD3-205ENST00000463688 WDR7Q9Y4E6 1490 aa21.99■■□□□ 1.11
COMMD3-205ENST00000463688 ABCA8O94911 1581 aa21.98■■□□□ 1.11
COMMD3-205ENST00000463688 TEX14Q8IWB6 1497 aa21.97■■□□□ 1.11
COMMD3-205ENST00000463688 EFCAB5A4FU69 1503 aa21.96■■□□□ 1.11
COMMD3-205ENST00000463688 EPRSP07814 1512 aaKnown RBP21.96■■□□□ 1.11
COMMD3-205ENST00000463688 SAMD9Q5K651 1589 aa21.95■■□□□ 1.1
COMMD3-205ENST00000463688 RANGAP1P46060 587 aaPredicted RBP21.94■■□□□ 1.1
COMMD3-205ENST00000463688 ZCCHC11Q5TAX3 1644 aaKnown RBP21.93■■□□□ 1.1
COMMD3-205ENST00000463688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
COMMD3-205ENST00000463688 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
COMMD3-205ENST00000463688 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
COMMD3-205ENST00000463688 PLEKHD1A6NEE1 506 aa21.88■■□□□ 1.09
COMMD3-205ENST00000463688 ATP10BO94823 1461 aa21.86■■□□□ 1.09
COMMD3-205ENST00000463688 FMN1Q68DA7 1419 aa21.86■■□□□ 1.09
COMMD3-205ENST00000463688 CD109Q6YHK3 1445 aa21.86■■□□□ 1.09
COMMD3-205ENST00000463688 PHLDB1Q86UU1 1377 aa21.85■■□□□ 1.09
COMMD3-205ENST00000463688 KDM6BO15054 1643 aa21.85■■□□□ 1.09
COMMD3-205ENST00000463688 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
COMMD3-205ENST00000463688 FHOD3Q2V2M9 1422 aa21.84■■□□□ 1.09
COMMD3-205ENST00000463688 RAPGEF6Q8TEU7 1601 aa21.82■■□□□ 1.08
COMMD3-205ENST00000463688 MAGI3Q5TCQ9 1506 aa21.81■■□□□ 1.08
COMMD3-205ENST00000463688 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
COMMD3-205ENST00000463688 MAP3K4Q9Y6R4 1608 aa21.78■■□□□ 1.08
COMMD3-205ENST00000463688 TSPOAP1O95153 1857 aa21.78■■□□□ 1.08
COMMD3-205ENST00000463688 EHMT2Q96KQ7 1210 aa21.77■■□□□ 1.08
COMMD3-205ENST00000463688 NUP153P49790 1475 aaKnown RBP21.75■■□□□ 1.07
COMMD3-205ENST00000463688 CFAP43Q8NDM7 1665 aa21.75■■□□□ 1.07
COMMD3-205ENST00000463688 ATP1B4Q9UN42 357 aaPredicted RBP21.72■■□□□ 1.07
COMMD3-205ENST00000463688 ARHGAP35Q9NRY4 1499 aa21.68■■□□□ 1.06
COMMD3-205ENST00000463688 NEO1Q92859 1461 aa21.66■■□□□ 1.06
COMMD3-205ENST00000463688 PPRC1Q5VV67 1664 aaKnown RBP21.65■■□□□ 1.06
COMMD3-205ENST00000463688 PHF23Q9BUL5 403 aaPredicted RBP21.63■■□□□ 1.05
COMMD3-205ENST00000463688 ABCA9Q8IUA7 1624 aa21.63■■□□□ 1.05
COMMD3-205ENST00000463688 ARAP3Q8WWN8 1544 aa21.63■■□□□ 1.05
COMMD3-205ENST00000463688 HECW1Q76N89 1606 aa21.62■■□□□ 1.05
COMMD3-205ENST00000463688 CLIP1P30622 1438 aa21.62■■□□□ 1.05
COMMD3-205ENST00000463688 COL17A1Q9UMD9 1497 aaPredicted RBP21.59■■□□□ 1.05
COMMD3-205ENST00000463688 CASKIN1Q8WXD9 1431 aa21.57■■□□□ 1.04
COMMD3-205ENST00000463688 CCDC18Q5T9S5 1454 aa21.56■■□□□ 1.04
COMMD3-205ENST00000463688 EFCAB2Q5VUJ9 269 aa21.54■■□□□ 1.04
COMMD3-205ENST00000463688 TROQ12816 1431 aaPredicted RBP21.52■■□□□ 1.04
COMMD3-205ENST00000463688 CFAP74Q9C0B2 1584 aa21.5■■□□□ 1.03
COMMD3-205ENST00000463688 FANCAO15360 1455 aa21.5■■□□□ 1.03
COMMD3-205ENST00000463688 PLCH2O75038 1416 aa21.49■■□□□ 1.03
COMMD3-205ENST00000463688 CDK13Q14004 1512 aaKnown RBP21.49■■□□□ 1.03
COMMD3-205ENST00000463688 AKNAQ7Z591 1439 aa21.49■■□□□ 1.03
COMMD3-205ENST00000463688 DENND4BO75064 1496 aaPredicted RBP21.49■■□□□ 1.03
COMMD3-205ENST00000463688 FYCO1Q9BQS8 1478 aa21.49■■□□□ 1.03
COMMD3-205ENST00000463688 KDM4FA0A1W2PPD8 638 aa21.48■■□□□ 1.03
COMMD3-205ENST00000463688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.47■■□□□ 1.03
COMMD3-205ENST00000463688 RAPGEF3O95398 923 aa21.46■■□□□ 1.03
COMMD3-205ENST00000463688 KIF14Q15058 1648 aa21.42■■□□□ 1.02
COMMD3-205ENST00000463688 MAGI2Q86UL8 1455 aa21.41■■□□□ 1.02
COMMD3-205ENST00000463688 ADGRL1O94910 1474 aa21.4■■□□□ 1.02
COMMD3-205ENST00000463688 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
COMMD3-205ENST00000463688 CEP162Q5TB80 1403 aa21.37■■□□□ 1.01
COMMD3-205ENST00000463688 ARID4BQ4LE39 1312 aaPredicted RBP21.37■■□□□ 1.01
COMMD3-205ENST00000463688 SCAPERQ9BY12 1400 aa21.37■■□□□ 1.01
COMMD3-205ENST00000463688 TTC37Q6PGP7 1564 aa21.35■■□□□ 1.01
COMMD3-205ENST00000463688 POGZQ7Z3K3 1410 aa21.35■■□□□ 1.01
COMMD3-205ENST00000463688 MTUS2Q5JR59 1369 aa21.34■■□□□ 1.01
COMMD3-205ENST00000463688 PCF11O94913 1555 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms