RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PRG4Q92954 1404 aaPredicted RBP22.26■■□□□ 1.15
HDAC1-203ENST00000463172 ERCC6L2Q5T890 1561 aa22.25■■□□□ 1.15
HDAC1-203ENST00000463172 KIAA0586Q9BVV6 1533 aa22.25■■□□□ 1.15
HDAC1-203ENST00000463172 TRHP20396 242 aaPredicted RBP22.24■■□□□ 1.15
HDAC1-203ENST00000463172 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
HDAC1-203ENST00000463172 IQGAP2Q13576 1575 aa22.1■■□□□ 1.13
HDAC1-203ENST00000463172 CARMIL2Q6F5E8 1435 aa22.09■■□□□ 1.13
HDAC1-203ENST00000463172 NPM1P06748 294 aaKnown RBP eCLIP22.05■■□□□ 1.12
HDAC1-203ENST00000463172 CTTNBP2Q8WZ74 1663 aa21.99■■□□□ 1.11
HDAC1-203ENST00000463172 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
HDAC1-203ENST00000463172 PTPRGP23470 1445 aa21.98■■□□□ 1.11
HDAC1-203ENST00000463172 EEA1Q15075 1411 aa21.97■■□□□ 1.11
HDAC1-203ENST00000463172 PRXQ9BXM0 1461 aa21.96■■□□□ 1.11
HDAC1-203ENST00000463172 UGGT2Q9NYU1 1516 aa21.95■■□□□ 1.1
HDAC1-203ENST00000463172 ADCY10Q96PN6 1610 aa21.94■■□□□ 1.1
HDAC1-203ENST00000463172 CSRNP3Q8WYN3 585 aa21.93■■□□□ 1.1
HDAC1-203ENST00000463172 TTBK1Q5TCY1 1321 aaPredicted RBP21.92■■□□□ 1.1
HDAC1-203ENST00000463172 DISP1Q96F81 1524 aa21.9■■□□□ 1.1
HDAC1-203ENST00000463172 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
HDAC1-203ENST00000463172 MAPKBP1O60336 1514 aa21.89■■□□□ 1.09
HDAC1-203ENST00000463172 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
HDAC1-203ENST00000463172 FAM9AQ8IZU1 332 aaPredicted RBP21.85■■□□□ 1.09
HDAC1-203ENST00000463172 KIF13AQ9H1H9 1805 aa21.84■■□□□ 1.09
HDAC1-203ENST00000463172 UACAQ9BZF9 1416 aa21.83■■□□□ 1.09
HDAC1-203ENST00000463172 UHRF1BP1LA0JNW5 1464 aa21.82■■□□□ 1.08
HDAC1-203ENST00000463172 ABCC2Q92887 1545 aa21.81■■□□□ 1.08
HDAC1-203ENST00000463172 ABCC10Q5T3U5 1492 aa21.81■■□□□ 1.08
HDAC1-203ENST00000463172 FAM69CQ0P6D2 419 aa21.79■■□□□ 1.08
HDAC1-203ENST00000463172 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
HDAC1-203ENST00000463172 DIP2BQ9P265 1576 aa21.75■■□□□ 1.07
HDAC1-203ENST00000463172 PLB1Q6P1J6 1458 aa21.73■■□□□ 1.07
HDAC1-203ENST00000463172 KIF21BO75037 1637 aa21.71■■□□□ 1.07
HDAC1-203ENST00000463172 KDM5BQ9UGL1 1544 aa21.7■■□□□ 1.06
HDAC1-203ENST00000463172 ASXL2Q76L83 1435 aa21.69■■□□□ 1.06
HDAC1-203ENST00000463172 ZCCHC11Q5TAX3 1644 aaKnown RBP21.66■■□□□ 1.06
HDAC1-203ENST00000463172 SAMD9Q5K651 1589 aa21.64■■□□□ 1.05
HDAC1-203ENST00000463172 TSPOAP1O95153 1857 aa21.63■■□□□ 1.05
HDAC1-203ENST00000463172 ABCA8O94911 1581 aa21.63■■□□□ 1.05
HDAC1-203ENST00000463172 GLI2P10070 1586 aa21.61■■□□□ 1.05
HDAC1-203ENST00000463172 P3H3Q8IVL6 736 aa21.61■■□□□ 1.05
HDAC1-203ENST00000463172 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
HDAC1-203ENST00000463172 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
HDAC1-203ENST00000463172 WDR7Q9Y4E6 1490 aa21.56■■□□□ 1.04
HDAC1-203ENST00000463172 EFCAB5A4FU69 1503 aa21.55■■□□□ 1.04
HDAC1-203ENST00000463172 EPRSP07814 1512 aaKnown RBP21.55■■□□□ 1.04
HDAC1-203ENST00000463172 KDM6BO15054 1643 aa21.52■■□□□ 1.04
HDAC1-203ENST00000463172 RAPGEF6Q8TEU7 1601 aa21.51■■□□□ 1.03
HDAC1-203ENST00000463172 MAP3K4Q9Y6R4 1608 aa21.49■■□□□ 1.03
HDAC1-203ENST00000463172 TEX14Q8IWB6 1497 aa21.49■■□□□ 1.03
HDAC1-203ENST00000463172 FHOD3Q2V2M9 1422 aa21.47■■□□□ 1.03
HDAC1-203ENST00000463172 EHMT2Q96KQ7 1210 aa21.47■■□□□ 1.03
HDAC1-203ENST00000463172 KCNH8Q96L42 1107 aa21.45■■□□□ 1.02
HDAC1-203ENST00000463172 PPRC1Q5VV67 1664 aaKnown RBP21.44■■□□□ 1.02
HDAC1-203ENST00000463172 CFAP43Q8NDM7 1665 aa21.44■■□□□ 1.02
HDAC1-203ENST00000463172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
HDAC1-203ENST00000463172 HNRNPUL2Q1KMD3 747 aaKnown RBP21.44■■□□□ 1.02
HDAC1-203ENST00000463172 ATP10BO94823 1461 aa21.44■■□□□ 1.02
HDAC1-203ENST00000463172 ARID3CA6NKF2 412 aa21.43■■□□□ 1.02
HDAC1-203ENST00000463172 CD109Q6YHK3 1445 aa21.39■■□□□ 1.02
HDAC1-203ENST00000463172 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
HDAC1-203ENST00000463172 NUP153P49790 1475 aaKnown RBP21.37■■□□□ 1.01
HDAC1-203ENST00000463172 FMN1Q68DA7 1419 aa21.37■■□□□ 1.01
HDAC1-203ENST00000463172 MAGI3Q5TCQ9 1506 aa21.35■■□□□ 1.01
HDAC1-203ENST00000463172 PLEKHD1A6NEE1 506 aa21.33■■□□□ 1.01
HDAC1-203ENST00000463172 ARHGAP35Q9NRY4 1499 aa21.32■■□□□ 1
HDAC1-203ENST00000463172 ABCA9Q8IUA7 1624 aa21.3■■□□□ 1
HDAC1-203ENST00000463172 HECW1Q76N89 1606 aa21.29■■□□□ 1
HDAC1-203ENST00000463172 ATP1B4Q9UN42 357 aaPredicted RBP21.27■■□□□ 1
HDAC1-203ENST00000463172 PHLDB1Q86UU1 1377 aa21.25■□□□□ 0.99
HDAC1-203ENST00000463172 CDK11AQ9UQ88 783 aaPredicted RBP21.24■□□□□ 0.99
HDAC1-203ENST00000463172 COL17A1Q9UMD9 1497 aaPredicted RBP21.21■□□□□ 0.99
HDAC1-203ENST00000463172 CDK13Q14004 1512 aaKnown RBP21.19■□□□□ 0.98
HDAC1-203ENST00000463172 NEO1Q92859 1461 aa21.19■□□□□ 0.98
HDAC1-203ENST00000463172 ARAP3Q8WWN8 1544 aa21.18■□□□□ 0.98
HDAC1-203ENST00000463172 CLIP1P30622 1438 aa21.16■□□□□ 0.98
HDAC1-203ENST00000463172 CFAP74Q9C0B2 1584 aa21.15■□□□□ 0.98
HDAC1-203ENST00000463172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.13■□□□□ 0.97
HDAC1-203ENST00000463172 CCDC18Q5T9S5 1454 aa21.13■□□□□ 0.97
HDAC1-203ENST00000463172 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
HDAC1-203ENST00000463172 PCF11O94913 1555 aaKnown RBP21.09■□□□□ 0.97
HDAC1-203ENST00000463172 TTC37Q6PGP7 1564 aa21.09■□□□□ 0.97
HDAC1-203ENST00000463172 FYCO1Q9BQS8 1478 aa21.08■□□□□ 0.97
HDAC1-203ENST00000463172 KIF14Q15058 1648 aa21.08■□□□□ 0.97
HDAC1-203ENST00000463172 FANCAO15360 1455 aa21.07■□□□□ 0.96
HDAC1-203ENST00000463172 TROQ12816 1431 aaPredicted RBP21.07■□□□□ 0.96
HDAC1-203ENST00000463172 LRRIQ1Q96JM4 1722 aa21.06■□□□□ 0.96
HDAC1-203ENST00000463172 AKNAQ7Z591 1439 aa21.05■□□□□ 0.96
HDAC1-203ENST00000463172 MYO5CQ9NQX4 1742 aa21.05■□□□□ 0.96
HDAC1-203ENST00000463172 DENND4BO75064 1496 aaPredicted RBP21.03■□□□□ 0.96
HDAC1-203ENST00000463172 ADGRL1O94910 1474 aa21.03■□□□□ 0.96
HDAC1-203ENST00000463172 KDM4FA0A1W2PPD8 638 aa21.03■□□□□ 0.96
HDAC1-203ENST00000463172 PLCH2O75038 1416 aa21.03■□□□□ 0.96
HDAC1-203ENST00000463172 RAPGEF3O95398 923 aa21.01■□□□□ 0.95
HDAC1-203ENST00000463172 EFCAB2Q5VUJ9 269 aa21■□□□□ 0.95
HDAC1-203ENST00000463172 CEP162Q5TB80 1403 aa20.98■□□□□ 0.95
HDAC1-203ENST00000463172 RICTORQ6R327 1708 aa20.96■□□□□ 0.95
HDAC1-203ENST00000463172 ARHGAP5Q13017 1502 aa20.95■□□□□ 0.94
HDAC1-203ENST00000463172 FRMPD1Q5SYB0 1578 aa20.95■□□□□ 0.94
HDAC1-203ENST00000463172 SCAPERQ9BY12 1400 aa20.92■□□□□ 0.94
HDAC1-203ENST00000463172 ZMYM4Q5VZL5 1548 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms