RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 JPH4Q96JJ6 628 aa14□□□□□ -0.17
PGBD2-203ENST00000462488 RUSC2Q8N2Y8 1516 aa13.99□□□□□ -0.17
PGBD2-203ENST00000462488 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
PGBD2-203ENST00000462488 PRG4Q92954 1404 aaPredicted RBP13.97□□□□□ -0.17
PGBD2-203ENST00000462488 TTBK1Q5TCY1 1321 aaPredicted RBP13.95□□□□□ -0.18
PGBD2-203ENST00000462488 FAM9AQ8IZU1 332 aaPredicted RBP13.95□□□□□ -0.18
PGBD2-203ENST00000462488 ERCC6L2Q5T890 1561 aa13.93□□□□□ -0.18
PGBD2-203ENST00000462488 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
PGBD2-203ENST00000462488 KIAA0586Q9BVV6 1533 aa13.92□□□□□ -0.18
PGBD2-203ENST00000462488 SHROOM2Q13796 1616 aa13.92□□□□□ -0.18
PGBD2-203ENST00000462488 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
PGBD2-203ENST00000462488 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
PGBD2-203ENST00000462488 CARMIL2Q6F5E8 1435 aa13.86□□□□□ -0.19
PGBD2-203ENST00000462488 IQGAP2Q13576 1575 aa13.86□□□□□ -0.19
PGBD2-203ENST00000462488 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
PGBD2-203ENST00000462488 EEA1Q15075 1411 aa13.82□□□□□ -0.2
PGBD2-203ENST00000462488 PTPRGP23470 1445 aa13.81□□□□□ -0.2
PGBD2-203ENST00000462488 RANGAP1P46060 587 aaPredicted RBP13.8□□□□□ -0.2
PGBD2-203ENST00000462488 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
PGBD2-203ENST00000462488 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
PGBD2-203ENST00000462488 TNIKQ9UKE5 1360 aa13.78□□□□□ -0.2
PGBD2-203ENST00000462488 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
PGBD2-203ENST00000462488 P3H3Q8IVL6 736 aa13.74□□□□□ -0.21
PGBD2-203ENST00000462488 UGGT2Q9NYU1 1516 aa13.73□□□□□ -0.21
PGBD2-203ENST00000462488 GOLGA3Q08378 1498 aa13.73□□□□□ -0.21
PGBD2-203ENST00000462488 DISP1Q96F81 1524 aa13.72□□□□□ -0.21
PGBD2-203ENST00000462488 KIAA0556O60303 1618 aa13.7□□□□□ -0.22
PGBD2-203ENST00000462488 ADCY10Q96PN6 1610 aa13.7□□□□□ -0.22
PGBD2-203ENST00000462488 FAM69CQ0P6D2 419 aa13.68□□□□□ -0.22
PGBD2-203ENST00000462488 UACAQ9BZF9 1416 aa13.67□□□□□ -0.22
PGBD2-203ENST00000462488 KIF21BO75037 1637 aa13.65□□□□□ -0.22
PGBD2-203ENST00000462488 ARID3CA6NKF2 412 aa13.63□□□□□ -0.23
PGBD2-203ENST00000462488 ABCC2Q92887 1545 aa13.63□□□□□ -0.23
PGBD2-203ENST00000462488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
PGBD2-203ENST00000462488 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
PGBD2-203ENST00000462488 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
PGBD2-203ENST00000462488 MAPKBP1O60336 1514 aa13.6□□□□□ -0.23
PGBD2-203ENST00000462488 UHRF1BP1LA0JNW5 1464 aa13.6□□□□□ -0.23
PGBD2-203ENST00000462488 KIF13AQ9H1H9 1805 aa13.59□□□□□ -0.23
PGBD2-203ENST00000462488 ASXL2Q76L83 1435 aa13.58□□□□□ -0.24
PGBD2-203ENST00000462488 ATP1B4Q9UN42 357 aaPredicted RBP13.58□□□□□ -0.24
PGBD2-203ENST00000462488 ABCC10Q5T3U5 1492 aa13.58□□□□□ -0.24
PGBD2-203ENST00000462488 TSPOAP1O95153 1857 aa13.57□□□□□ -0.24
PGBD2-203ENST00000462488 FHOD3Q2V2M9 1422 aa13.56□□□□□ -0.24
PGBD2-203ENST00000462488 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
PGBD2-203ENST00000462488 ZCCHC11Q5TAX3 1644 aaKnown RBP13.56□□□□□ -0.24
PGBD2-203ENST00000462488 SAMD9Q5K651 1589 aa13.55□□□□□ -0.24
PGBD2-203ENST00000462488 DIP2BQ9P265 1576 aa13.55□□□□□ -0.24
PGBD2-203ENST00000462488 KDM5BQ9UGL1 1544 aa13.54□□□□□ -0.24
PGBD2-203ENST00000462488 ABCA8O94911 1581 aa13.54□□□□□ -0.24
PGBD2-203ENST00000462488 EFCAB5A4FU69 1503 aa13.52□□□□□ -0.25
PGBD2-203ENST00000462488 RAPGEF6Q8TEU7 1601 aa13.5□□□□□ -0.25
PGBD2-203ENST00000462488 WDR7Q9Y4E6 1490 aa13.48□□□□□ -0.25
PGBD2-203ENST00000462488 EPRSP07814 1512 aaKnown RBP13.47□□□□□ -0.25
PGBD2-203ENST00000462488 PLEKHD1A6NEE1 506 aa13.46□□□□□ -0.25
PGBD2-203ENST00000462488 ATP10BO94823 1461 aa13.46□□□□□ -0.25
PGBD2-203ENST00000462488 ARHGAP35Q9NRY4 1499 aa13.44□□□□□ -0.26
PGBD2-203ENST00000462488 FMN1Q68DA7 1419 aa13.44□□□□□ -0.26
PGBD2-203ENST00000462488 GLI2P10070 1586 aa13.44□□□□□ -0.26
PGBD2-203ENST00000462488 SENP3Q9H4L4 574 aaPredicted RBP13.42□□□□□ -0.26
PGBD2-203ENST00000462488 KDM6BO15054 1643 aa13.42□□□□□ -0.26
PGBD2-203ENST00000462488 NUP153P49790 1475 aaKnown RBP13.42□□□□□ -0.26
PGBD2-203ENST00000462488 CD109Q6YHK3 1445 aa13.41□□□□□ -0.26
PGBD2-203ENST00000462488 TEX14Q8IWB6 1497 aa13.41□□□□□ -0.26
PGBD2-203ENST00000462488 CLIP1P30622 1438 aa13.4□□□□□ -0.26
PGBD2-203ENST00000462488 CDK11AQ9UQ88 783 aaPredicted RBP13.39□□□□□ -0.27
PGBD2-203ENST00000462488 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
PGBD2-203ENST00000462488 LOC105371045A0A1W2PR82 267 aa13.38□□□□□ -0.27
PGBD2-203ENST00000462488 HECW1Q76N89 1606 aa13.38□□□□□ -0.27
PGBD2-203ENST00000462488 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
PGBD2-203ENST00000462488 CDK13Q14004 1512 aaKnown RBP13.36□□□□□ -0.27
PGBD2-203ENST00000462488 PPRC1Q5VV67 1664 aaKnown RBP13.34□□□□□ -0.27
PGBD2-203ENST00000462488 MAGI3Q5TCQ9 1506 aa13.31□□□□□ -0.28
PGBD2-203ENST00000462488 CEP162Q5TB80 1403 aa13.3□□□□□ -0.28
PGBD2-203ENST00000462488 ABCA9Q8IUA7 1624 aa13.3□□□□□ -0.28
PGBD2-203ENST00000462488 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
PGBD2-203ENST00000462488 CASKIN1Q8WXD9 1431 aa13.29□□□□□ -0.28
PGBD2-203ENST00000462488 CCDC18Q5T9S5 1454 aa13.27□□□□□ -0.29
PGBD2-203ENST00000462488 FYCO1Q9BQS8 1478 aa13.26□□□□□ -0.29
PGBD2-203ENST00000462488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.25□□□□□ -0.29
PGBD2-203ENST00000462488 COL17A1Q9UMD9 1497 aaPredicted RBP13.25□□□□□ -0.29
PGBD2-203ENST00000462488 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
PGBD2-203ENST00000462488 PHLDB1Q86UU1 1377 aa13.24□□□□□ -0.29
PGBD2-203ENST00000462488 LRRIQ1Q96JM4 1722 aa13.24□□□□□ -0.29
PGBD2-203ENST00000462488 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
PGBD2-203ENST00000462488 MYT1LQ9UL68 1186 aa13.23□□□□□ -0.29
PGBD2-203ENST00000462488 KIF14Q15058 1648 aa13.23□□□□□ -0.29
PGBD2-203ENST00000462488 TTC37Q6PGP7 1564 aa13.23□□□□□ -0.29
PGBD2-203ENST00000462488 FANCAO15360 1455 aa13.23□□□□□ -0.29
PGBD2-203ENST00000462488 NEO1Q92859 1461 aa13.23□□□□□ -0.29
PGBD2-203ENST00000462488 EFCAB2Q5VUJ9 269 aa13.22□□□□□ -0.29
PGBD2-203ENST00000462488 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
PGBD2-203ENST00000462488 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
PGBD2-203ENST00000462488 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
PGBD2-203ENST00000462488 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
PGBD2-203ENST00000462488 ARAP3Q8WWN8 1544 aa13.19□□□□□ -0.3
PGBD2-203ENST00000462488 ARHGAP5Q13017 1502 aa13.18□□□□□ -0.3
PGBD2-203ENST00000462488 APLP2Q06481 763 aa13.18□□□□□ -0.3
PGBD2-203ENST00000462488 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
PGBD2-203ENST00000462488 PLCH2O75038 1416 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms