RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
LRRC47-202ENST00000462356 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
LRRC47-202ENST00000462356 PRG4Q92954 1404 aaPredicted RBP22.47■■□□□ 1.19
LRRC47-202ENST00000462356 RAPGEF2Q9Y4G8 1499 aa22.45■■□□□ 1.18
LRRC47-202ENST00000462356 KIAA0586Q9BVV6 1533 aa22.45■■□□□ 1.18
LRRC47-202ENST00000462356 FAM9AQ8IZU1 332 aaPredicted RBP22.43■■□□□ 1.18
LRRC47-202ENST00000462356 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
LRRC47-202ENST00000462356 PRXQ9BXM0 1461 aa22.33■■□□□ 1.16
LRRC47-202ENST00000462356 IQGAP2Q13576 1575 aa22.33■■□□□ 1.16
LRRC47-202ENST00000462356 TTBK1Q5TCY1 1321 aaPredicted RBP22.32■■□□□ 1.16
LRRC47-202ENST00000462356 TRHP20396 242 aaPredicted RBP22.27■■□□□ 1.16
LRRC47-202ENST00000462356 EEA1Q15075 1411 aa22.25■■□□□ 1.15
LRRC47-202ENST00000462356 CTTNBP2Q8WZ74 1663 aa22.23■■□□□ 1.15
LRRC47-202ENST00000462356 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
LRRC47-202ENST00000462356 CARMIL2Q6F5E8 1435 aa22.21■■□□□ 1.15
LRRC47-202ENST00000462356 DISP1Q96F81 1524 aa22.2■■□□□ 1.14
LRRC47-202ENST00000462356 PTPRGP23470 1445 aa22.18■■□□□ 1.14
LRRC47-202ENST00000462356 UGGT2Q9NYU1 1516 aa22.17■■□□□ 1.14
LRRC47-202ENST00000462356 TNIKQ9UKE5 1360 aa22.16■■□□□ 1.14
LRRC47-202ENST00000462356 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
LRRC47-202ENST00000462356 KIAA0556O60303 1618 aa22.12■■□□□ 1.13
LRRC47-202ENST00000462356 ADCY10Q96PN6 1610 aa22.12■■□□□ 1.13
LRRC47-202ENST00000462356 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
LRRC47-202ENST00000462356 NPM1P06748 294 aaKnown RBP eCLIP22.08■■□□□ 1.13
LRRC47-202ENST00000462356 KIF21BO75037 1637 aa22.07■■□□□ 1.12
LRRC47-202ENST00000462356 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
LRRC47-202ENST00000462356 UBTFP17480 764 aaKnown RBP22.02■■□□□ 1.12
LRRC47-202ENST00000462356 UACAQ9BZF9 1416 aa22.01■■□□□ 1.11
LRRC47-202ENST00000462356 PLB1Q6P1J6 1458 aa21.96■■□□□ 1.11
LRRC47-202ENST00000462356 ABCC2Q92887 1545 aa21.95■■□□□ 1.1
LRRC47-202ENST00000462356 UHRF1BP1LA0JNW5 1464 aa21.94■■□□□ 1.1
LRRC47-202ENST00000462356 SAMD9Q5K651 1589 aa21.92■■□□□ 1.1
LRRC47-202ENST00000462356 MAPKBP1O60336 1514 aa21.92■■□□□ 1.1
LRRC47-202ENST00000462356 FAM69CQ0P6D2 419 aa21.92■■□□□ 1.1
LRRC47-202ENST00000462356 KIF13AQ9H1H9 1805 aa21.91■■□□□ 1.1
LRRC47-202ENST00000462356 ARID3CA6NKF2 412 aa21.9■■□□□ 1.1
LRRC47-202ENST00000462356 FHOD3Q2V2M9 1422 aa21.89■■□□□ 1.09
LRRC47-202ENST00000462356 ABCC10Q5T3U5 1492 aa21.88■■□□□ 1.09
LRRC47-202ENST00000462356 ABCA8O94911 1581 aa21.87■■□□□ 1.09
LRRC47-202ENST00000462356 ZCCHC11Q5TAX3 1644 aaKnown RBP21.86■■□□□ 1.09
LRRC47-202ENST00000462356 ASXL2Q76L83 1435 aa21.86■■□□□ 1.09
LRRC47-202ENST00000462356 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
LRRC47-202ENST00000462356 DIP2BQ9P265 1576 aa21.84■■□□□ 1.09
LRRC47-202ENST00000462356 EFCAB5A4FU69 1503 aa21.78■■□□□ 1.08
LRRC47-202ENST00000462356 RAPGEF6Q8TEU7 1601 aa21.77■■□□□ 1.07
LRRC47-202ENST00000462356 TSPOAP1O95153 1857 aa21.76■■□□□ 1.07
LRRC47-202ENST00000462356 ARHGAP35Q9NRY4 1499 aa21.75■■□□□ 1.07
LRRC47-202ENST00000462356 KCNH8Q96L42 1107 aa21.74■■□□□ 1.07
LRRC47-202ENST00000462356 ATP10BO94823 1461 aa21.73■■□□□ 1.07
LRRC47-202ENST00000462356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
LRRC47-202ENST00000462356 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
LRRC47-202ENST00000462356 EPRSP07814 1512 aaKnown RBP21.71■■□□□ 1.07
LRRC47-202ENST00000462356 WDR7Q9Y4E6 1490 aa21.71■■□□□ 1.07
LRRC47-202ENST00000462356 ATP1B4Q9UN42 357 aaPredicted RBP21.69■■□□□ 1.06
LRRC47-202ENST00000462356 NUP153P49790 1475 aaKnown RBP21.69■■□□□ 1.06
LRRC47-202ENST00000462356 GLI2P10070 1586 aa21.66■■□□□ 1.06
LRRC47-202ENST00000462356 LOC105371045A0A1W2PR82 267 aa21.66■■□□□ 1.06
LRRC47-202ENST00000462356 PPRC1Q5VV67 1664 aaKnown RBP21.61■■□□□ 1.05
LRRC47-202ENST00000462356 FMN1Q68DA7 1419 aa21.6■■□□□ 1.05
LRRC47-202ENST00000462356 MAP3K4Q9Y6R4 1608 aa21.59■■□□□ 1.05
LRRC47-202ENST00000462356 CLIP1P30622 1438 aa21.59■■□□□ 1.05
LRRC47-202ENST00000462356 CDK13Q14004 1512 aaKnown RBP21.59■■□□□ 1.05
LRRC47-202ENST00000462356 PLEKHD1A6NEE1 506 aa21.55■■□□□ 1.04
LRRC47-202ENST00000462356 CD109Q6YHK3 1445 aa21.55■■□□□ 1.04
LRRC47-202ENST00000462356 KDM6BO15054 1643 aa21.53■■□□□ 1.04
LRRC47-202ENST00000462356 HECW1Q76N89 1606 aa21.53■■□□□ 1.04
LRRC47-202ENST00000462356 CFAP43Q8NDM7 1665 aa21.51■■□□□ 1.03
LRRC47-202ENST00000462356 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
LRRC47-202ENST00000462356 LRRIQ1Q96JM4 1722 aa21.49■■□□□ 1.03
LRRC47-202ENST00000462356 CEP162Q5TB80 1403 aa21.48■■□□□ 1.03
LRRC47-202ENST00000462356 TEX14Q8IWB6 1497 aa21.47■■□□□ 1.03
LRRC47-202ENST00000462356 COL17A1Q9UMD9 1497 aaPredicted RBP21.46■■□□□ 1.03
LRRC47-202ENST00000462356 ABCA9Q8IUA7 1624 aa21.46■■□□□ 1.03
LRRC47-202ENST00000462356 CASKIN1Q8WXD9 1431 aa21.45■■□□□ 1.02
LRRC47-202ENST00000462356 MAGI3Q5TCQ9 1506 aa21.45■■□□□ 1.02
LRRC47-202ENST00000462356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.4■■□□□ 1.02
LRRC47-202ENST00000462356 CDK11AQ9UQ88 783 aaPredicted RBP21.39■■□□□ 1.01
LRRC47-202ENST00000462356 TTC37Q6PGP7 1564 aa21.37■■□□□ 1.01
LRRC47-202ENST00000462356 FYCO1Q9BQS8 1478 aa21.37■■□□□ 1.01
LRRC47-202ENST00000462356 KIF14Q15058 1648 aa21.35■■□□□ 1.01
LRRC47-202ENST00000462356 TROQ12816 1431 aaPredicted RBP21.34■■□□□ 1.01
LRRC47-202ENST00000462356 CCDC18Q5T9S5 1454 aa21.33■■□□□ 1.01
LRRC47-202ENST00000462356 RAPGEF3O95398 923 aa21.28■■□□□ 1
LRRC47-202ENST00000462356 FANCAO15360 1455 aa21.26■□□□□ 0.99
LRRC47-202ENST00000462356 NEO1Q92859 1461 aa21.26■□□□□ 0.99
LRRC47-202ENST00000462356 ARAP3Q8WWN8 1544 aa21.26■□□□□ 0.99
LRRC47-202ENST00000462356 PLCH2O75038 1416 aa21.25■□□□□ 0.99
LRRC47-202ENST00000462356 AKNAQ7Z591 1439 aa21.24■□□□□ 0.99
LRRC47-202ENST00000462356 MYO5CQ9NQX4 1742 aa21.24■□□□□ 0.99
LRRC47-202ENST00000462356 PHLDB1Q86UU1 1377 aa21.23■□□□□ 0.99
LRRC47-202ENST00000462356 VPS8Q8N3P4 1428 aa21.21■□□□□ 0.99
LRRC47-202ENST00000462356 EFCAB2Q5VUJ9 269 aa21.19■□□□□ 0.98
LRRC47-202ENST00000462356 MTUS2Q5JR59 1369 aa21.19■□□□□ 0.98
LRRC47-202ENST00000462356 CFAP74Q9C0B2 1584 aa21.19■□□□□ 0.98
LRRC47-202ENST00000462356 ARHGAP5Q13017 1502 aa21.18■□□□□ 0.98
LRRC47-202ENST00000462356 FRMPD1Q5SYB0 1578 aa21.17■□□□□ 0.98
LRRC47-202ENST00000462356 CDC42BPBQ9Y5S2 1711 aa21.16■□□□□ 0.98
LRRC47-202ENST00000462356 DENND4BO75064 1496 aaPredicted RBP21.16■□□□□ 0.98
LRRC47-202ENST00000462356 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
LRRC47-202ENST00000462356 ADGRL1O94910 1474 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms