RNA–Protein interactions for RNA: ENST00000461972.5

FAM228B-202, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 2

Gene FAM228B, Length 2,616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-202ENST00000461972 AQRO60306 1485 aaKnown RBP eCLIP30■■■□□ 2.39
FAM228B-202ENST00000461972 TARBP1Q13395 1621 aaKnown RBP30■■■□□ 2.39
FAM228B-202ENST00000461972 TIAM1Q13009 1591 aa29.96■■■□□ 2.39
FAM228B-202ENST00000461972 RRBP1Q9P2E9 1410 aaKnown RBP29.95■■■□□ 2.38
FAM228B-202ENST00000461972 PCF11O94913 1555 aaKnown RBP29.94■■■□□ 2.38
FAM228B-202ENST00000461972 CCNB3Q8WWL7 1395 aa29.91■■■□□ 2.38
FAM228B-202ENST00000461972 MRC2Q9UBG0 1479 aa29.91■■■□□ 2.38
FAM228B-202ENST00000461972 CTTNBP2Q8WZ74 1663 aa29.9■■■□□ 2.38
FAM228B-202ENST00000461972 FHAD1B1AJZ9 1412 aa29.89■■■□□ 2.37
FAM228B-202ENST00000461972 LRRC9Q6ZRR7 1453 aa29.89■■■□□ 2.37
FAM228B-202ENST00000461972 PHLDB1Q86UU1 1377 aa29.86■■■□□ 2.37
FAM228B-202ENST00000461972 ZNF608Q9ULD9 1512 aaPredicted RBP29.84■■■□□ 2.37
FAM228B-202ENST00000461972 EFCAB5A4FU69 1503 aa29.79■■■□□ 2.36
FAM228B-202ENST00000461972 MAP3K1Q13233 1512 aa29.79■■■□□ 2.36
FAM228B-202ENST00000461972 DHX57Q6P158 1386 aaKnown RBP29.76■■■□□ 2.35
FAM228B-202ENST00000461972 CASKIN1Q8WXD9 1431 aa29.76■■■□□ 2.35
FAM228B-202ENST00000461972 FAM50AQ14320 339 aaKnown RBP29.75■■■□□ 2.35
FAM228B-202ENST00000461972 PBRM1Q86U86 1689 aa29.73■■■□□ 2.35
FAM228B-202ENST00000461972 FYCO1Q9BQS8 1478 aa29.72■■■□□ 2.35
FAM228B-202ENST00000461972 CFAP43Q8NDM7 1665 aa29.7■■■□□ 2.35
FAM228B-202ENST00000461972 SNAPC4Q5SXM2 1469 aa29.69■■■□□ 2.34
FAM228B-202ENST00000461972 ERCC6Q03468 1493 aa29.68■■■□□ 2.34
FAM228B-202ENST00000461972 SAMD9Q5K651 1589 aa29.67■■■□□ 2.34
FAM228B-202ENST00000461972 FMN1Q68DA7 1419 aa29.67■■■□□ 2.34
FAM228B-202ENST00000461972 DIEXFQ68CQ4 756 aaKnown RBP29.67■■■□□ 2.34
FAM228B-202ENST00000461972 WDR62O43379 1518 aa29.66■■■□□ 2.34
FAM228B-202ENST00000461972 GRIN2BQ13224 1484 aa29.64■■■□□ 2.34
FAM228B-202ENST00000461972 ADAMTS12P58397 1594 aa29.62■■■□□ 2.33
FAM228B-202ENST00000461972 IFT140Q96RY7 1462 aa29.62■■■□□ 2.33
FAM228B-202ENST00000461972 ZNF316A6NFI3 1004 aaPredicted RBP29.61■■■□□ 2.33
FAM228B-202ENST00000461972 ARID3CA6NKF2 412 aa29.61■■■□□ 2.33
FAM228B-202ENST00000461972 LRRIQ1Q96JM4 1722 aa29.6■■■□□ 2.33
FAM228B-202ENST00000461972 RAB3GAP2Q9H2M9 1393 aa29.59■■■□□ 2.33
FAM228B-202ENST00000461972 MTUS2Q5JR59 1369 aa29.54■■■□□ 2.32
FAM228B-202ENST00000461972 IQGAP2Q13576 1575 aa29.51■■■□□ 2.31
FAM228B-202ENST00000461972 EIF4G3O43432 1585 aaKnown RBP29.47■■■□□ 2.31
FAM228B-202ENST00000461972 FBLN2P98095 1184 aa29.46■■■□□ 2.31
FAM228B-202ENST00000461972 THOC2Q8NI27 1593 aaKnown RBP29.45■■■□□ 2.31
FAM228B-202ENST00000461972 SETD5Q9C0A6 1442 aa29.44■■■□□ 2.3
FAM228B-202ENST00000461972 MAGI3Q5TCQ9 1506 aa29.43■■■□□ 2.3
FAM228B-202ENST00000461972 CLSPNQ9HAW4 1339 aa29.42■■■□□ 2.3
FAM228B-202ENST00000461972 FGD6Q6ZV73 1430 aa29.4■■■□□ 2.3
FAM228B-202ENST00000461972 NCOA2Q15596 1464 aa29.39■■■□□ 2.29
FAM228B-202ENST00000461972 CHMP7Q8WUX9 453 aaPredicted RBP29.37■■■□□ 2.29
FAM228B-202ENST00000461972 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
FAM228B-202ENST00000461972 PTPRKQ15262 1439 aa29.36■■■□□ 2.29
FAM228B-202ENST00000461972 CDK13Q14004 1512 aaKnown RBP29.35■■■□□ 2.29
FAM228B-202ENST00000461972 MAPKBP1O60336 1514 aa29.33■■■□□ 2.29
FAM228B-202ENST00000461972 SIN3AQ96ST3 1273 aa29.32■■■□□ 2.28
FAM228B-202ENST00000461972 KIAA0586Q9BVV6 1533 aa29.32■■■□□ 2.28
FAM228B-202ENST00000461972 DISP1Q96F81 1524 aa29.31■■■□□ 2.28
FAM228B-202ENST00000461972 UGGT2Q9NYU1 1516 aa29.3■■■□□ 2.28
FAM228B-202ENST00000461972 EPRSP07814 1512 aaKnown RBP29.29■■■□□ 2.28
FAM228B-202ENST00000461972 MYOM3Q5VTT5 1437 aa29.27■■■□□ 2.28
FAM228B-202ENST00000461972 NEUROD1Q13562 356 aa29.25■■■□□ 2.27
FAM228B-202ENST00000461972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.23■■■□□ 2.27
FAM228B-202ENST00000461972 EHBP1L1Q8N3D4 1523 aa29.23■■■□□ 2.27
FAM228B-202ENST00000461972 MIER1Q8N108 512 aa29.22■■■□□ 2.27
FAM228B-202ENST00000461972 SUPT6HQ7KZ85 1726 aaKnown RBP29.22■■■□□ 2.27
FAM228B-202ENST00000461972 HECW1Q76N89 1606 aa29.22■■■□□ 2.27
FAM228B-202ENST00000461972 CEP170Q5SW79 1584 aa29.21■■■□□ 2.27
FAM228B-202ENST00000461972 KIAA0556O60303 1618 aa29.21■■■□□ 2.27
FAM228B-202ENST00000461972 CHIC2Q9UKJ5 165 aa29.21■■■□□ 2.27
FAM228B-202ENST00000461972 CCDC18Q5T9S5 1454 aa29.2■■■□□ 2.27
FAM228B-202ENST00000461972 MAGI1Q96QZ7 1491 aaPredicted RBP29.2■■■□□ 2.26
FAM228B-202ENST00000461972 SYNJ2O15056 1496 aa29.19■■■□□ 2.26
FAM228B-202ENST00000461972 ARHGEF11O15085 1522 aa29.16■■■□□ 2.26
FAM228B-202ENST00000461972 RRP7BPQ9NSQ0 103 aa29.14■■■□□ 2.26
FAM228B-202ENST00000461972 JPH4Q96JJ6 628 aa29.13■■■□□ 2.25
FAM228B-202ENST00000461972 NUP153P49790 1475 aaKnown RBP29.12■■■□□ 2.25
FAM228B-202ENST00000461972 PTPN23Q9H3S7 1636 aa29.12■■■□□ 2.25
FAM228B-202ENST00000461972 PLB1Q6P1J6 1458 aa29.08■■■□□ 2.25
FAM228B-202ENST00000461972 NAIPQ13075 1403 aa29.07■■■□□ 2.24
FAM228B-202ENST00000461972 SCAF1Q9H7N4 1312 aaKnown RBP29.07■■■□□ 2.24
FAM228B-202ENST00000461972 ZNF644Q9H582 1327 aaPredicted RBP29.06■■■□□ 2.24
FAM228B-202ENST00000461972 HFM1A2PYH4 1435 aa29.06■■■□□ 2.24
FAM228B-202ENST00000461972 YTHDC1Q96MU7 727 aaKnown RBP29.04■■■□□ 2.24
FAM228B-202ENST00000461972 NUP160Q12769 1436 aa29.03■■■□□ 2.24
FAM228B-202ENST00000461972 RAPGEF6Q8TEU7 1601 aa29.01■■■□□ 2.24
FAM228B-202ENST00000461972 PRG4Q92954 1404 aaPredicted RBP29■■■□□ 2.23
FAM228B-202ENST00000461972 TCOF1Q13428 1488 aaKnown RBP28.96■■■□□ 2.23
FAM228B-202ENST00000461972 ACIN1Q9UKV3 1341 aaKnown RBP28.95■■■□□ 2.22
FAM228B-202ENST00000461972 KDM6BO15054 1643 aa28.91■■■□□ 2.22
FAM228B-202ENST00000461972 UACAQ9BZF9 1416 aa28.91■■■□□ 2.22
FAM228B-202ENST00000461972 HIRIP3Q9BW71 556 aaPredicted RBP28.9■■■□□ 2.22
FAM228B-202ENST00000461972 CARMIL2Q6F5E8 1435 aa28.9■■■□□ 2.22
FAM228B-202ENST00000461972 MIA2Q96PC5 1412 aa28.89■■■□□ 2.21
FAM228B-202ENST00000461972 CDK11AQ9UQ88 783 aaPredicted RBP28.88■■■□□ 2.21
FAM228B-202ENST00000461972 TRIM52Q96A61 297 aa28.87■■■□□ 2.21
FAM228B-202ENST00000461972 PPP1R15AO75807 674 aaPredicted RBP28.84■■■□□ 2.21
FAM228B-202ENST00000461972 ZNF777Q9ULD5 760 aaPredicted RBP28.84■■■□□ 2.21
FAM228B-202ENST00000461972 FOXD1Q16676 465 aa28.82■■■□□ 2.2
FAM228B-202ENST00000461972 TROQ12816 1431 aaPredicted RBP28.81■■■□□ 2.2
FAM228B-202ENST00000461972 KIF14Q15058 1648 aa28.8■■■□□ 2.2
FAM228B-202ENST00000461972 ABCC5O15440 1437 aa28.8■■■□□ 2.2
FAM228B-202ENST00000461972 DENND4BO75064 1496 aaPredicted RBP28.79■■■□□ 2.2
FAM228B-202ENST00000461972 CFDP1Q9UEE9 299 aaPredicted RBP28.78■■■□□ 2.2
FAM228B-202ENST00000461972 DAPK1P53355 1430 aa28.78■■■□□ 2.2
FAM228B-202ENST00000461972 CENPBP07199 599 aaPredicted RBP28.76■■■□□ 2.19
FAM228B-202ENST00000461972 ATP10BO94823 1461 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms