RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 GRIN2AQ12879 1464 aa22.16■■□□□ 1.14
GTF3C5-208ENST00000461871 EFCAB5A4FU69 1503 aa22.15■■□□□ 1.14
GTF3C5-208ENST00000461871 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.14
GTF3C5-208ENST00000461871 KIAA0586Q9BVV6 1533 aa22.13■■□□□ 1.13
GTF3C5-208ENST00000461871 ARHGAP35Q9NRY4 1499 aa22.12■■□□□ 1.13
GTF3C5-208ENST00000461871 NUP160Q12769 1436 aa22.06■■□□□ 1.12
GTF3C5-208ENST00000461871 ARAP1Q96P48 1450 aa22.06■■□□□ 1.12
GTF3C5-208ENST00000461871 IQGAP2Q13576 1575 aa22.05■■□□□ 1.12
GTF3C5-208ENST00000461871 UGGT2Q9NYU1 1516 aa22.02■■□□□ 1.12
GTF3C5-208ENST00000461871 SAMD9Q5K651 1589 aa22■■□□□ 1.11
GTF3C5-208ENST00000461871 RANGAP1P46060 587 aaPredicted RBP22■■□□□ 1.11
GTF3C5-208ENST00000461871 APLP2Q06481 763 aa21.99■■□□□ 1.11
GTF3C5-208ENST00000461871 FMN1Q68DA7 1419 aa21.97■■□□□ 1.11
GTF3C5-208ENST00000461871 FBLN2P98095 1184 aa21.97■■□□□ 1.11
GTF3C5-208ENST00000461871 MAP3K1Q13233 1512 aa21.94■■□□□ 1.1
GTF3C5-208ENST00000461871 CEP170Q5SW79 1584 aa21.93■■□□□ 1.1
GTF3C5-208ENST00000461871 TRIM26Q12899 539 aaPredicted RBP21.92■■□□□ 1.1
GTF3C5-208ENST00000461871 JPH4Q96JJ6 628 aa21.9■■□□□ 1.1
GTF3C5-208ENST00000461871 CARMIL2Q6F5E8 1435 aa21.88■■□□□ 1.09
GTF3C5-208ENST00000461871 CASKIN1Q8WXD9 1431 aa21.88■■□□□ 1.09
GTF3C5-208ENST00000461871 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
GTF3C5-208ENST00000461871 FYCO1Q9BQS8 1478 aa21.85■■□□□ 1.09
GTF3C5-208ENST00000461871 FHOD3Q2V2M9 1422 aa21.85■■□□□ 1.09
GTF3C5-208ENST00000461871 CHD1O14646 1710 aa21.85■■□□□ 1.09
GTF3C5-208ENST00000461871 P3H3Q8IVL6 736 aa21.83■■□□□ 1.09
GTF3C5-208ENST00000461871 DISP1Q96F81 1524 aa21.83■■□□□ 1.09
GTF3C5-208ENST00000461871 KIAA0556O60303 1618 aa21.8■■□□□ 1.08
GTF3C5-208ENST00000461871 SHROOM2Q13796 1616 aa21.74■■□□□ 1.07
GTF3C5-208ENST00000461871 CLASP1Q7Z460 1538 aa21.71■■□□□ 1.07
GTF3C5-208ENST00000461871 PCF11O94913 1555 aaKnown RBP21.71■■□□□ 1.07
GTF3C5-208ENST00000461871 TIAM1Q13009 1591 aa21.71■■□□□ 1.07
GTF3C5-208ENST00000461871 PRG4Q92954 1404 aaPredicted RBP21.7■■□□□ 1.06
GTF3C5-208ENST00000461871 CCDC18Q5T9S5 1454 aa21.7■■□□□ 1.06
GTF3C5-208ENST00000461871 OSCARQ8IYS5 282 aa21.68■■□□□ 1.06
GTF3C5-208ENST00000461871 PCGF6Q9BYE7 350 aa21.67■■□□□ 1.06
GTF3C5-208ENST00000461871 HECW1Q76N89 1606 aa21.66■■□□□ 1.06
GTF3C5-208ENST00000461871 CFAP43Q8NDM7 1665 aa21.65■■□□□ 1.06
GTF3C5-208ENST00000461871 RIMBP3CA6NJZ7 1639 aa21.65■■□□□ 1.06
GTF3C5-208ENST00000461871 RIMBP3BA6NNM3 1639 aa21.65■■□□□ 1.06
GTF3C5-208ENST00000461871 RIMBP3Q9UFD9 1639 aa21.65■■□□□ 1.06
GTF3C5-208ENST00000461871 LRRC9Q6ZRR7 1453 aa21.64■■□□□ 1.06
GTF3C5-208ENST00000461871 KANK4Q5T7N3 995 aaPredicted RBP21.63■■□□□ 1.05
GTF3C5-208ENST00000461871 PPARGC1BQ86YN6 1023 aaKnown RBP21.62■■□□□ 1.05
GTF3C5-208ENST00000461871 ATP1B4Q9UN42 357 aaPredicted RBP21.61■■□□□ 1.05
GTF3C5-208ENST00000461871 PTPRGP23470 1445 aa21.61■■□□□ 1.05
GTF3C5-208ENST00000461871 RAPGEF6Q8TEU7 1601 aa21.58■■□□□ 1.05
GTF3C5-208ENST00000461871 CDK11AQ9UQ88 783 aaPredicted RBP21.58■■□□□ 1.05
GTF3C5-208ENST00000461871 EPRSP07814 1512 aaKnown RBP21.58■■□□□ 1.04
GTF3C5-208ENST00000461871 ABCA8O94911 1581 aa21.54■■□□□ 1.04
GTF3C5-208ENST00000461871 MTUS2Q5JR59 1369 aa21.53■■□□□ 1.04
GTF3C5-208ENST00000461871 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.04
GTF3C5-208ENST00000461871 EHBP1L1Q8N3D4 1523 aa21.5■■□□□ 1.03
GTF3C5-208ENST00000461871 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
GTF3C5-208ENST00000461871 PLB1Q6P1J6 1458 aa21.49■■□□□ 1.03
GTF3C5-208ENST00000461871 UACAQ9BZF9 1416 aa21.48■■□□□ 1.03
GTF3C5-208ENST00000461871 TRHP20396 242 aaPredicted RBP21.48■■□□□ 1.03
GTF3C5-208ENST00000461871 LRRIQ1Q96JM4 1722 aa21.48■■□□□ 1.03
GTF3C5-208ENST00000461871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.46■■□□□ 1.03
GTF3C5-208ENST00000461871 UHRF1BP1LA0JNW5 1464 aa21.45■■□□□ 1.03
GTF3C5-208ENST00000461871 TTBK1Q5TCY1 1321 aaPredicted RBP21.42■■□□□ 1.02
GTF3C5-208ENST00000461871 SUPT6HQ7KZ85 1726 aaKnown RBP21.42■■□□□ 1.02
GTF3C5-208ENST00000461871 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
GTF3C5-208ENST00000461871 CCNB3Q8WWL7 1395 aa21.41■■□□□ 1.02
GTF3C5-208ENST00000461871 ATP10BO94823 1461 aa21.4■■□□□ 1.02
GTF3C5-208ENST00000461871 PLEKHD1A6NEE1 506 aa21.39■■□□□ 1.01
GTF3C5-208ENST00000461871 ERCC6L2Q5T890 1561 aa21.39■■□□□ 1.01
GTF3C5-208ENST00000461871 CDK13Q14004 1512 aaKnown RBP21.39■■□□□ 1.01
GTF3C5-208ENST00000461871 ABCC2Q92887 1545 aa21.39■■□□□ 1.01
GTF3C5-208ENST00000461871 TROQ12816 1431 aaPredicted RBP21.38■■□□□ 1.01
GTF3C5-208ENST00000461871 NCOA2Q15596 1464 aa21.37■■□□□ 1.01
GTF3C5-208ENST00000461871 PHLDB1Q86UU1 1377 aa21.36■■□□□ 1.01
GTF3C5-208ENST00000461871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
GTF3C5-208ENST00000461871 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
GTF3C5-208ENST00000461871 MAGI3Q5TCQ9 1506 aa21.34■■□□□ 1.01
GTF3C5-208ENST00000461871 MYOM3Q5VTT5 1437 aa21.34■■□□□ 1.01
GTF3C5-208ENST00000461871 MIA2Q96PC5 1412 aa21.33■■□□□ 1.01
GTF3C5-208ENST00000461871 KDM5BQ9UGL1 1544 aa21.31■■□□□ 1
GTF3C5-208ENST00000461871 FGD6Q6ZV73 1430 aa21.3■■□□□ 1
GTF3C5-208ENST00000461871 ADCY10Q96PN6 1610 aa21.29■■□□□ 1
GTF3C5-208ENST00000461871 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
GTF3C5-208ENST00000461871 ILDR1Q86SU0 546 aaPredicted RBP21.26■□□□□ 0.99
GTF3C5-208ENST00000461871 TCOF1Q13428 1488 aaKnown RBP21.22■□□□□ 0.99
GTF3C5-208ENST00000461871 ARID3CA6NKF2 412 aa21.22■□□□□ 0.99
GTF3C5-208ENST00000461871 KIF14Q15058 1648 aa21.19■□□□□ 0.98
GTF3C5-208ENST00000461871 HRCP23327 699 aa21.19■□□□□ 0.98
GTF3C5-208ENST00000461871 FAM50AQ14320 339 aaKnown RBP21.17■□□□□ 0.98
GTF3C5-208ENST00000461871 ABCC10Q5T3U5 1492 aa21.17■□□□□ 0.98
GTF3C5-208ENST00000461871 ITSN2Q9NZM3 1697 aa21.16■□□□□ 0.98
GTF3C5-208ENST00000461871 NPM1P06748 294 aaKnown RBP eCLIP21.16■□□□□ 0.98
GTF3C5-208ENST00000461871 ZCCHC11Q5TAX3 1644 aaKnown RBP21.15■□□□□ 0.98
GTF3C5-208ENST00000461871 PTPN23Q9H3S7 1636 aa21.15■□□□□ 0.98
GTF3C5-208ENST00000461871 GPATCH8Q9UKJ3 1502 aaKnown RBP21.15■□□□□ 0.98
GTF3C5-208ENST00000461871 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
GTF3C5-208ENST00000461871 CFDP1Q9UEE9 299 aaPredicted RBP21.13■□□□□ 0.97
GTF3C5-208ENST00000461871 ZEB1P37275 1124 aaPredicted RBP21.12■□□□□ 0.97
GTF3C5-208ENST00000461871 RSPH4AQ5TD94 716 aa21.09■□□□□ 0.97
GTF3C5-208ENST00000461871 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
GTF3C5-208ENST00000461871 AKNAQ7Z591 1439 aa21.04■□□□□ 0.96
GTF3C5-208ENST00000461871 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
GTF3C5-208ENST00000461871 ARAP3Q8WWN8 1544 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 1333.7 ms