RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 IGF1RP08069 1367 aa31.24■■■□□ 2.59
SSB-206ENST00000461708 CUL7Q14999 1698 aa31.2■■■□□ 2.59
SSB-206ENST00000461708 KIAA0586Q9BVV6 1533 aa31.14■■■□□ 2.57
SSB-206ENST00000461708 CARMIL1Q5VZK9 1371 aa31.02■■■□□ 2.56
SSB-206ENST00000461708 KIF13AQ9H1H9 1805 aa30.94■■■□□ 2.54
SSB-206ENST00000461708 NPM1P06748 294 aaKnown RBP eCLIP30.91■■■□□ 2.54
SSB-206ENST00000461708 MAPKBP1O60336 1514 aa30.91■■■□□ 2.54
SSB-206ENST00000461708 ADCY10Q96PN6 1610 aa30.9■■■□□ 2.54
SSB-206ENST00000461708 ABCC10Q5T3U5 1492 aa30.85■■■□□ 2.53
SSB-206ENST00000461708 CARMIL2Q6F5E8 1435 aa30.82■■■□□ 2.52
SSB-206ENST00000461708 IQGAP2Q13576 1575 aa30.82■■■□□ 2.52
SSB-206ENST00000461708 PTPRGP23470 1445 aa30.81■■■□□ 2.52
SSB-206ENST00000461708 TNIKQ9UKE5 1360 aa30.77■■■□□ 2.52
SSB-206ENST00000461708 RAPGEF2Q9Y4G8 1499 aa30.76■■■□□ 2.52
SSB-206ENST00000461708 FAM69CQ0P6D2 419 aa30.76■■■□□ 2.51
SSB-206ENST00000461708 DIP2BQ9P265 1576 aa30.75■■■□□ 2.51
SSB-206ENST00000461708 DISP1Q96F81 1524 aa30.67■■■□□ 2.5
SSB-206ENST00000461708 UGGT2Q9NYU1 1516 aa30.66■■■□□ 2.5
SSB-206ENST00000461708 ABCC2Q92887 1545 aa30.65■■■□□ 2.5
SSB-206ENST00000461708 UHRF1BP1LA0JNW5 1464 aa30.64■■■□□ 2.5
SSB-206ENST00000461708 AEBP2Q6ZN18 517 aaPredicted RBP30.61■■■□□ 2.49
SSB-206ENST00000461708 UACAQ9BZF9 1416 aa30.58■■■□□ 2.49
SSB-206ENST00000461708 TTBK1Q5TCY1 1321 aaPredicted RBP30.56■■■□□ 2.48
SSB-206ENST00000461708 PLB1Q6P1J6 1458 aa30.54■■■□□ 2.48
SSB-206ENST00000461708 KIAA0556O60303 1618 aa30.52■■■□□ 2.48
SSB-206ENST00000461708 ASXL2Q76L83 1435 aa30.51■■■□□ 2.47
SSB-206ENST00000461708 CTTNBP2Q8WZ74 1663 aa30.49■■■□□ 2.47
SSB-206ENST00000461708 KDM5BQ9UGL1 1544 aa30.48■■■□□ 2.47
SSB-206ENST00000461708 PRXQ9BXM0 1461 aa30.48■■■□□ 2.47
SSB-206ENST00000461708 GLI2P10070 1586 aa30.48■■■□□ 2.47
SSB-206ENST00000461708 TSPOAP1O95153 1857 aa30.46■■■□□ 2.47
SSB-206ENST00000461708 KDM6BO15054 1643 aa30.44■■■□□ 2.46
SSB-206ENST00000461708 GOLGA3Q08378 1498 aa30.43■■■□□ 2.46
SSB-206ENST00000461708 ZCCHC11Q5TAX3 1644 aaKnown RBP30.36■■■□□ 2.45
SSB-206ENST00000461708 EPRSP07814 1512 aaKnown RBP30.34■■■□□ 2.45
SSB-206ENST00000461708 PPRC1Q5VV67 1664 aaKnown RBP30.33■■■□□ 2.45
SSB-206ENST00000461708 MAP3K4Q9Y6R4 1608 aa30.27■■■□□ 2.44
SSB-206ENST00000461708 ABCA8O94911 1581 aa30.26■■■□□ 2.43
SSB-206ENST00000461708 WDR7Q9Y4E6 1490 aa30.25■■■□□ 2.43
SSB-206ENST00000461708 CSRNP3Q8WYN3 585 aa30.24■■■□□ 2.43
SSB-206ENST00000461708 TEX14Q8IWB6 1497 aa30.21■■■□□ 2.43
SSB-206ENST00000461708 EEA1Q15075 1411 aa30.19■■■□□ 2.42
SSB-206ENST00000461708 FAM9AQ8IZU1 332 aaPredicted RBP30.15■■■□□ 2.42
SSB-206ENST00000461708 COL17A1Q9UMD9 1497 aaPredicted RBP30.11■■■□□ 2.41
SSB-206ENST00000461708 KDM4FA0A1W2PPD8 638 aa30.1■■■□□ 2.41
SSB-206ENST00000461708 SAMD9Q5K651 1589 aa30.09■■■□□ 2.41
SSB-206ENST00000461708 CFAP43Q8NDM7 1665 aa30.07■■■□□ 2.41
SSB-206ENST00000461708 MAGI3Q5TCQ9 1506 aa30.06■■■□□ 2.4
SSB-206ENST00000461708 CD109Q6YHK3 1445 aa30.04■■■□□ 2.4
SSB-206ENST00000461708 KCNH8Q96L42 1107 aa30.01■■■□□ 2.39
SSB-206ENST00000461708 ATP10BO94823 1461 aa30■■■□□ 2.39
SSB-206ENST00000461708 P3H3Q8IVL6 736 aa30■■■□□ 2.39
SSB-206ENST00000461708 RAPGEF6Q8TEU7 1601 aa29.93■■■□□ 2.38
SSB-206ENST00000461708 KIF21BO75037 1637 aa29.9■■■□□ 2.38
SSB-206ENST00000461708 ADGRL1O94910 1474 aa29.88■■■□□ 2.37
SSB-206ENST00000461708 ABCA9Q8IUA7 1624 aa29.85■■■□□ 2.37
SSB-206ENST00000461708 ARID3CA6NKF2 412 aa29.85■■■□□ 2.37
SSB-206ENST00000461708 PHLDB1Q86UU1 1377 aa29.84■■■□□ 2.37
SSB-206ENST00000461708 ARAP3Q8WWN8 1544 aa29.84■■■□□ 2.37
SSB-206ENST00000461708 NUP153P49790 1475 aaKnown RBP29.83■■■□□ 2.37
SSB-206ENST00000461708 EFCAB5A4FU69 1503 aa29.82■■■□□ 2.36
SSB-206ENST00000461708 FHOD3Q2V2M9 1422 aa29.8■■■□□ 2.36
SSB-206ENST00000461708 RANGAP1P46060 587 aaPredicted RBP29.74■■■□□ 2.35
SSB-206ENST00000461708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.73■■■□□ 2.35
SSB-206ENST00000461708 HNRNPUL2Q1KMD3 747 aaKnown RBP29.73■■■□□ 2.35
SSB-206ENST00000461708 NEO1Q92859 1461 aa29.73■■■□□ 2.35
SSB-206ENST00000461708 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
SSB-206ENST00000461708 PLEKHD1A6NEE1 506 aa29.67■■■□□ 2.34
SSB-206ENST00000461708 UBTFP17480 764 aaKnown RBP29.59■■■□□ 2.33
SSB-206ENST00000461708 FMN1Q68DA7 1419 aa29.55■■■□□ 2.32
SSB-206ENST00000461708 RAPGEF3O95398 923 aa29.55■■■□□ 2.32
SSB-206ENST00000461708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.54■■■□□ 2.322e-20■□□□□ 9
SSB-206ENST00000461708 FRMPD1Q5SYB0 1578 aa29.52■■■□□ 2.32
SSB-206ENST00000461708 CFAP74Q9C0B2 1584 aa29.52■■■□□ 2.32
SSB-206ENST00000461708 ARHGAP35Q9NRY4 1499 aa29.51■■■□□ 2.31
SSB-206ENST00000461708 CDK13Q14004 1512 aaKnown RBP29.49■■■□□ 2.31
SSB-206ENST00000461708 FANCAO15360 1455 aa29.48■■■□□ 2.31
SSB-206ENST00000461708 AKNAQ7Z591 1439 aa29.48■■■□□ 2.31
SSB-206ENST00000461708 DENND4BO75064 1496 aaPredicted RBP29.47■■■□□ 2.31
SSB-206ENST00000461708 TTC37Q6PGP7 1564 aa29.47■■■□□ 2.31
SSB-206ENST00000461708 HECW1Q76N89 1606 aa29.46■■■□□ 2.31
SSB-206ENST00000461708 HECW2Q9P2P5 1572 aa29.44■■■□□ 2.3
SSB-206ENST00000461708 RICTORQ6R327 1708 aa29.44■■■□□ 2.3
SSB-206ENST00000461708 ADAMTSL3P82987 1691 aa29.42■■■□□ 2.3
SSB-206ENST00000461708 EHMT2Q96KQ7 1210 aa29.42■■■□□ 2.3
SSB-206ENST00000461708 CDK11AQ9UQ88 783 aaPredicted RBP29.4■■■□□ 2.3
SSB-206ENST00000461708 PLCH2O75038 1416 aa29.39■■■□□ 2.3
SSB-206ENST00000461708 ARHGEF40Q8TER5 1519 aa29.39■■■□□ 2.3
SSB-206ENST00000461708 ZMYM4Q5VZL5 1548 aa29.37■■■□□ 2.29
SSB-206ENST00000461708 BCORL1Q5H9F3 1711 aa29.34■■■□□ 2.29
SSB-206ENST00000461708 ATP1B4Q9UN42 357 aaPredicted RBP29.34■■■□□ 2.29
SSB-206ENST00000461708 PTPRMP28827 1452 aa29.33■■■□□ 2.29
SSB-206ENST00000461708 MAGI2Q86UL8 1455 aa29.33■■■□□ 2.29
SSB-206ENST00000461708 TROQ12816 1431 aaPredicted RBP29.29■■■□□ 2.28
SSB-206ENST00000461708 MYO5CQ9NQX4 1742 aa29.29■■■□□ 2.28
SSB-206ENST00000461708 ARID4BQ4LE39 1312 aaPredicted RBP29.29■■■□□ 2.28
SSB-206ENST00000461708 EFCAB2Q5VUJ9 269 aa29.27■■■□□ 2.28
SSB-206ENST00000461708 POGZQ7Z3K3 1410 aa29.27■■■□□ 2.28
SSB-206ENST00000461708 SCAPERQ9BY12 1400 aa29.27■■■□□ 2.28
SSB-206ENST00000461708 KIF14Q15058 1648 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms