RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 JPH4Q96JJ6 628 aa40.62■■■■■ 4.09
LMBR1-214ENST00000461469 CARMIL1Q5VZK9 1371 aa40.6■■■■■ 4.09
LMBR1-214ENST00000461469 KIAA0586Q9BVV6 1533 aa40.53■■■■■ 4.08
LMBR1-214ENST00000461469 TRHP20396 242 aaPredicted RBP40.53■■■■■ 4.08
LMBR1-214ENST00000461469 RAPGEF2Q9Y4G8 1499 aa40.29■■■■■ 4.04
LMBR1-214ENST00000461469 IQGAP2Q13576 1575 aa40.25■■■■■ 4.03
LMBR1-214ENST00000461469 ADCY10Q96PN6 1610 aa40.18■■■■■ 4.02
LMBR1-214ENST00000461469 PRXQ9BXM0 1461 aa40.07■■■■■ 4.01
LMBR1-214ENST00000461469 DISP1Q96F81 1524 aa40.07■■■■■ 4.01
LMBR1-214ENST00000461469 KIF13AQ9H1H9 1805 aa40.04■■■■■ 4
LMBR1-214ENST00000461469 PTPRGP23470 1445 aa40.03■■■■■ 4
LMBR1-214ENST00000461469 UGGT2Q9NYU1 1516 aa40.02■■■■■ 4
LMBR1-214ENST00000461469 CARMIL2Q6F5E8 1435 aa40.02■■■■■ 4
LMBR1-214ENST00000461469 CTTNBP2Q8WZ74 1663 aa40.02■■■■■ 4
LMBR1-214ENST00000461469 TNIKQ9UKE5 1360 aa40■■■■□ 3.99
LMBR1-214ENST00000461469 TTBK1Q5TCY1 1321 aaPredicted RBP39.99■■■■□ 3.99
LMBR1-214ENST00000461469 MAPKBP1O60336 1514 aa39.93■■■■□ 3.98
LMBR1-214ENST00000461469 KIAA0556O60303 1618 aa39.92■■■■□ 3.98
LMBR1-214ENST00000461469 NPM1P06748 294 aaKnown RBP eCLIP39.87■■■■□ 3.97
LMBR1-214ENST00000461469 ABCC10Q5T3U5 1492 aa39.83■■■■□ 3.97
LMBR1-214ENST00000461469 CSRNP3Q8WYN3 585 aa39.82■■■■□ 3.97
LMBR1-214ENST00000461469 DIP2BQ9P265 1576 aa39.81■■■■□ 3.96
LMBR1-214ENST00000461469 ABCC2Q92887 1545 aa39.77■■■■□ 3.96
LMBR1-214ENST00000461469 UHRF1BP1LA0JNW5 1464 aa39.76■■■■□ 3.96
LMBR1-214ENST00000461469 UACAQ9BZF9 1416 aa39.76■■■■□ 3.96
LMBR1-214ENST00000461469 FAM69CQ0P6D2 419 aa39.73■■■■□ 3.95
LMBR1-214ENST00000461469 EEA1Q15075 1411 aa39.7■■■■□ 3.95
LMBR1-214ENST00000461469 CHIC1Q5VXU3 224 aa39.66■■■■□ 3.94
LMBR1-214ENST00000461469 FAM9AQ8IZU1 332 aaPredicted RBP39.65■■■■□ 3.94
LMBR1-214ENST00000461469 GOLGA3Q08378 1498 aa39.64■■■■□ 3.94
LMBR1-214ENST00000461469 KDM5BQ9UGL1 1544 aa39.6■■■■□ 3.93
LMBR1-214ENST00000461469 ASXL2Q76L83 1435 aa39.6■■■■□ 3.93
LMBR1-214ENST00000461469 PLB1Q6P1J6 1458 aa39.6■■■■□ 3.93
LMBR1-214ENST00000461469 ZCCHC11Q5TAX3 1644 aaKnown RBP39.58■■■■□ 3.93
LMBR1-214ENST00000461469 TSPOAP1O95153 1857 aa39.54■■■■□ 3.92
LMBR1-214ENST00000461469 ABCA8O94911 1581 aa39.53■■■■□ 3.92
LMBR1-214ENST00000461469 SAMD9Q5K651 1589 aa39.48■■■■□ 3.91
LMBR1-214ENST00000461469 KIF21BO75037 1637 aa39.47■■■■□ 3.91
LMBR1-214ENST00000461469 P3H3Q8IVL6 736 aa39.46■■■■□ 3.91
LMBR1-214ENST00000461469 GLI2P10070 1586 aa39.42■■■■□ 3.9
LMBR1-214ENST00000461469 PPRC1Q5VV67 1664 aaKnown RBP39.39■■■■□ 3.9
LMBR1-214ENST00000461469 EPRSP07814 1512 aaKnown RBP39.38■■■■□ 3.89
LMBR1-214ENST00000461469 RANGAP1P46060 587 aaPredicted RBP39.3■■■■□ 3.88
LMBR1-214ENST00000461469 WDR7Q9Y4E6 1490 aa39.29■■■■□ 3.88
LMBR1-214ENST00000461469 MAP3K4Q9Y6R4 1608 aa39.29■■■■□ 3.88
LMBR1-214ENST00000461469 KDM6BO15054 1643 aa39.27■■■■□ 3.88
LMBR1-214ENST00000461469 EHMT2Q96KQ7 1210 aa39.24■■■■□ 3.87
LMBR1-214ENST00000461469 FHOD3Q2V2M9 1422 aa39.22■■■■□ 3.87
LMBR1-214ENST00000461469 ARID3CA6NKF2 412 aa39.2■■■■□ 3.87
LMBR1-214ENST00000461469 RAPGEF6Q8TEU7 1601 aa39.19■■■■□ 3.86
LMBR1-214ENST00000461469 ATP10BO94823 1461 aa39.18■■■■□ 3.86
LMBR1-214ENST00000461469 EFCAB5A4FU69 1503 aa39.09■■■■□ 3.85
LMBR1-214ENST00000461469 KCNH8Q96L42 1107 aa39.07■■■■□ 3.85
LMBR1-214ENST00000461469 NUP153P49790 1475 aaKnown RBP39.06■■■■□ 3.84
LMBR1-214ENST00000461469 COL17A1Q9UMD9 1497 aaPredicted RBP39.05■■■■□ 3.84
LMBR1-214ENST00000461469 UBTFP17480 764 aaKnown RBP39.04■■■■□ 3.84
LMBR1-214ENST00000461469 CFAP43Q8NDM7 1665 aa39.03■■■■□ 3.84
LMBR1-214ENST00000461469 TEX14Q8IWB6 1497 aa38.98■■■■□ 3.83
LMBR1-214ENST00000461469 CD109Q6YHK3 1445 aa38.97■■■■□ 3.83
LMBR1-214ENST00000461469 MAGI3Q5TCQ9 1506 aa38.94■■■■□ 3.82
LMBR1-214ENST00000461469 ARHGAP35Q9NRY4 1499 aa38.93■■■■□ 3.82
LMBR1-214ENST00000461469 ABCA9Q8IUA7 1624 aa38.87■■■■□ 3.81
LMBR1-214ENST00000461469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.84■■■■□ 3.81
LMBR1-214ENST00000461469 HNRNPUL2Q1KMD3 747 aaKnown RBP38.84■■■■□ 3.81
LMBR1-214ENST00000461469 AEBP2Q6ZN18 517 aaPredicted RBP38.82■■■■□ 3.8
LMBR1-214ENST00000461469 CDK13Q14004 1512 aaKnown RBP38.77■■■■□ 3.8
LMBR1-214ENST00000461469 FMN1Q68DA7 1419 aa38.7■■■■□ 3.79
LMBR1-214ENST00000461469 KDM4FA0A1W2PPD8 638 aa38.68■■■■□ 3.78
LMBR1-214ENST00000461469 HECW1Q76N89 1606 aa38.66■■■■□ 3.78
LMBR1-214ENST00000461469 PLEKHD1A6NEE1 506 aa38.65■■■■□ 3.78
LMBR1-214ENST00000461469 LRRIQ1Q96JM4 1722 aa38.63■■■■□ 3.78
LMBR1-214ENST00000461469 ARAP3Q8WWN8 1544 aa38.62■■■■□ 3.77
LMBR1-214ENST00000461469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.61■■■■□ 3.771e-6■■■□□ 16.9
LMBR1-214ENST00000461469 TTC37Q6PGP7 1564 aa38.59■■■■□ 3.77
LMBR1-214ENST00000461469 ATP1B4Q9UN42 357 aaPredicted RBP38.57■■■■□ 3.76
LMBR1-214ENST00000461469 NEO1Q92859 1461 aa38.53■■■■□ 3.76
LMBR1-214ENST00000461469 PCF11O94913 1555 aaKnown RBP38.51■■■■□ 3.76
LMBR1-214ENST00000461469 ADGRL1O94910 1474 aa38.48■■■■□ 3.75
LMBR1-214ENST00000461469 FRMPD1Q5SYB0 1578 aa38.47■■■■□ 3.75
LMBR1-214ENST00000461469 PHLDB1Q86UU1 1377 aa38.46■■■■□ 3.75
LMBR1-214ENST00000461469 CLIP1P30622 1438 aa38.44■■■■□ 3.74
LMBR1-214ENST00000461469 RAPGEF3O95398 923 aa38.43■■■■□ 3.74
LMBR1-214ENST00000461469 KIF14Q15058 1648 aa38.42■■■■□ 3.74
LMBR1-214ENST00000461469 CASKIN1Q8WXD9 1431 aa38.4■■■■□ 3.74
LMBR1-214ENST00000461469 FANCAO15360 1455 aa38.39■■■■□ 3.74
LMBR1-214ENST00000461469 AKNAQ7Z591 1439 aa38.35■■■■□ 3.73
LMBR1-214ENST00000461469 TROQ12816 1431 aaPredicted RBP38.34■■■■□ 3.73
LMBR1-214ENST00000461469 RICTORQ6R327 1708 aa38.33■■■■□ 3.73
LMBR1-214ENST00000461469 CFAP74Q9C0B2 1584 aa38.33■■■■□ 3.73
LMBR1-214ENST00000461469 PLCH2O75038 1416 aa38.3■■■■□ 3.72
LMBR1-214ENST00000461469 MYO5CQ9NQX4 1742 aa38.29■■■■□ 3.72
LMBR1-214ENST00000461469 CDK11AQ9UQ88 783 aaPredicted RBP38.28■■■■□ 3.72
LMBR1-214ENST00000461469 FYCO1Q9BQS8 1478 aa38.28■■■■□ 3.72
LMBR1-214ENST00000461469 DENND4BO75064 1496 aaPredicted RBP38.26■■■■□ 3.72
LMBR1-214ENST00000461469 CCDC18Q5T9S5 1454 aa38.25■■■■□ 3.71
LMBR1-214ENST00000461469 CEP162Q5TB80 1403 aa38.15■■■■□ 3.7
LMBR1-214ENST00000461469 CDC42BPBQ9Y5S2 1711 aa38.14■■■■□ 3.7
LMBR1-214ENST00000461469 ZMYM4Q5VZL5 1548 aa38.13■■■■□ 3.69
LMBR1-214ENST00000461469 ARHGEF40Q8TER5 1519 aa38.13■■■■□ 3.69
LMBR1-214ENST00000461469 SCAPERQ9BY12 1400 aa38.12■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms