RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 PRG4Q92954 1404 aaPredicted RBP26.83■■□□□ 1.89
NUP50-213ENST00000461437 JPH4Q96JJ6 628 aa26.8■■□□□ 1.88
NUP50-213ENST00000461437 CARMIL1Q5VZK9 1371 aa26.73■■□□□ 1.87
NUP50-213ENST00000461437 KIAA0586Q9BVV6 1533 aa26.7■■□□□ 1.86
NUP50-213ENST00000461437 ADCY10Q96PN6 1610 aa26.56■■□□□ 1.84
NUP50-213ENST00000461437 IQGAP2Q13576 1575 aa26.54■■□□□ 1.84
NUP50-213ENST00000461437 KIF13AQ9H1H9 1805 aa26.54■■□□□ 1.84
NUP50-213ENST00000461437 TTBK1Q5TCY1 1321 aaPredicted RBP26.54■■□□□ 1.84
NUP50-213ENST00000461437 RAPGEF2Q9Y4G8 1499 aa26.52■■□□□ 1.84
NUP50-213ENST00000461437 CTTNBP2Q8WZ74 1663 aa26.43■■□□□ 1.82
NUP50-213ENST00000461437 PTPRGP23470 1445 aa26.4■■□□□ 1.82
NUP50-213ENST00000461437 DISP1Q96F81 1524 aa26.4■■□□□ 1.82
NUP50-213ENST00000461437 CARMIL2Q6F5E8 1435 aa26.39■■□□□ 1.82
NUP50-213ENST00000461437 TNIKQ9UKE5 1360 aa26.38■■□□□ 1.81
NUP50-213ENST00000461437 NPM1P06748 294 aaKnown RBP eCLIP26.37■■□□□ 1.81
NUP50-213ENST00000461437 MAPKBP1O60336 1514 aa26.36■■□□□ 1.81
NUP50-213ENST00000461437 AEBP2Q6ZN18 517 aaPredicted RBP26.36■■□□□ 1.81
NUP50-213ENST00000461437 UGGT2Q9NYU1 1516 aa26.35■■□□□ 1.81
NUP50-213ENST00000461437 KIAA0556O60303 1618 aa26.34■■□□□ 1.81
NUP50-213ENST00000461437 DIP2BQ9P265 1576 aa26.33■■□□□ 1.81
NUP50-213ENST00000461437 PRXQ9BXM0 1461 aa26.32■■□□□ 1.8
NUP50-213ENST00000461437 ABCC10Q5T3U5 1492 aa26.31■■□□□ 1.8
NUP50-213ENST00000461437 FAM69CQ0P6D2 419 aa26.3■■□□□ 1.8
NUP50-213ENST00000461437 TSPOAP1O95153 1857 aa26.29■■□□□ 1.8
NUP50-213ENST00000461437 ABCC2Q92887 1545 aa26.24■■□□□ 1.79
NUP50-213ENST00000461437 UACAQ9BZF9 1416 aa26.22■■□□□ 1.79
NUP50-213ENST00000461437 UHRF1BP1LA0JNW5 1464 aa26.18■■□□□ 1.78
NUP50-213ENST00000461437 FAM9AQ8IZU1 332 aaPredicted RBP26.17■■□□□ 1.78
NUP50-213ENST00000461437 CSRNP3Q8WYN3 585 aa26.17■■□□□ 1.78
NUP50-213ENST00000461437 ZCCHC11Q5TAX3 1644 aaKnown RBP26.17■■□□□ 1.78
NUP50-213ENST00000461437 ASXL2Q76L83 1435 aa26.15■■□□□ 1.78
NUP50-213ENST00000461437 PLB1Q6P1J6 1458 aa26.13■■□□□ 1.77
NUP50-213ENST00000461437 GOLGA3Q08378 1498 aa26.11■■□□□ 1.77
NUP50-213ENST00000461437 KDM5BQ9UGL1 1544 aa26.09■■□□□ 1.77
NUP50-213ENST00000461437 P3H3Q8IVL6 736 aa26.08■■□□□ 1.77
NUP50-213ENST00000461437 PPRC1Q5VV67 1664 aaKnown RBP26.06■■□□□ 1.76
NUP50-213ENST00000461437 ABCA8O94911 1581 aa26.05■■□□□ 1.76
NUP50-213ENST00000461437 EEA1Q15075 1411 aa26.04■■□□□ 1.76
NUP50-213ENST00000461437 KDM6BO15054 1643 aa26.03■■□□□ 1.76
NUP50-213ENST00000461437 RANGAP1P46060 587 aaPredicted RBP26.02■■□□□ 1.76
NUP50-213ENST00000461437 GLI2P10070 1586 aa26.01■■□□□ 1.75
NUP50-213ENST00000461437 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
NUP50-213ENST00000461437 SAMD9Q5K651 1589 aa25.99■■□□□ 1.75
NUP50-213ENST00000461437 EPRSP07814 1512 aaKnown RBP25.99■■□□□ 1.75
NUP50-213ENST00000461437 ARID3CA6NKF2 412 aa25.97■■□□□ 1.75
NUP50-213ENST00000461437 EHMT2Q96KQ7 1210 aa25.97■■□□□ 1.75
NUP50-213ENST00000461437 MAP3K4Q9Y6R4 1608 aa25.96■■□□□ 1.75
NUP50-213ENST00000461437 KIF21BO75037 1637 aa25.94■■□□□ 1.74
NUP50-213ENST00000461437 WDR7Q9Y4E6 1490 aa25.92■■□□□ 1.74
NUP50-213ENST00000461437 KCNH8Q96L42 1107 aa25.86■■□□□ 1.73
NUP50-213ENST00000461437 FHOD3Q2V2M9 1422 aa25.86■■□□□ 1.73
NUP50-213ENST00000461437 RAPGEF6Q8TEU7 1601 aa25.85■■□□□ 1.73
NUP50-213ENST00000461437 ATP10BO94823 1461 aa25.82■■□□□ 1.72
NUP50-213ENST00000461437 COL17A1Q9UMD9 1497 aaPredicted RBP25.8■■□□□ 1.72
NUP50-213ENST00000461437 CFAP43Q8NDM7 1665 aa25.79■■□□□ 1.72
NUP50-213ENST00000461437 TEX14Q8IWB6 1497 aa25.74■■□□□ 1.71
NUP50-213ENST00000461437 NUP153P49790 1475 aaKnown RBP25.73■■□□□ 1.71
NUP50-213ENST00000461437 CD109Q6YHK3 1445 aa25.73■■□□□ 1.71
NUP50-213ENST00000461437 UBTFP17480 764 aaKnown RBP25.73■■□□□ 1.71
NUP50-213ENST00000461437 EFCAB5A4FU69 1503 aa25.72■■□□□ 1.71
NUP50-213ENST00000461437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.7■■□□□ 1.7
NUP50-213ENST00000461437 HNRNPUL2Q1KMD3 747 aaKnown RBP25.7■■□□□ 1.7
NUP50-213ENST00000461437 MAGI3Q5TCQ9 1506 aa25.67■■□□□ 1.7
NUP50-213ENST00000461437 ABCA9Q8IUA7 1624 aa25.64■■□□□ 1.7
NUP50-213ENST00000461437 KDM4FA0A1W2PPD8 638 aa25.62■■□□□ 1.69
NUP50-213ENST00000461437 ARHGAP35Q9NRY4 1499 aa25.6■■□□□ 1.69
NUP50-213ENST00000461437 CDK13Q14004 1512 aaKnown RBP25.58■■□□□ 1.69
NUP50-213ENST00000461437 ATP1B4Q9UN42 357 aaPredicted RBP25.52■■□□□ 1.68
NUP50-213ENST00000461437 ADGRL1O94910 1474 aa25.51■■□□□ 1.67
NUP50-213ENST00000461437 LRRIQ1Q96JM4 1722 aa25.5■■□□□ 1.67
NUP50-213ENST00000461437 TTC37Q6PGP7 1564 aa25.48■■□□□ 1.67
NUP50-213ENST00000461437 PLEKHD1A6NEE1 506 aa25.48■■□□□ 1.67
NUP50-213ENST00000461437 HECW1Q76N89 1606 aa25.48■■□□□ 1.67
NUP50-213ENST00000461437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
NUP50-213ENST00000461437 ARAP3Q8WWN8 1544 aa25.46■■□□□ 1.67
NUP50-213ENST00000461437 FMN1Q68DA7 1419 aa25.45■■□□□ 1.66
NUP50-213ENST00000461437 RAPGEF3O95398 923 aa25.41■■□□□ 1.66
NUP50-213ENST00000461437 FRMPD1Q5SYB0 1578 aa25.4■■□□□ 1.66
NUP50-213ENST00000461437 NEO1Q92859 1461 aa25.4■■□□□ 1.66
NUP50-213ENST00000461437 PCF11O94913 1555 aaKnown RBP25.38■■□□□ 1.65
NUP50-213ENST00000461437 KIF14Q15058 1648 aa25.36■■□□□ 1.65
NUP50-213ENST00000461437 RICTORQ6R327 1708 aa25.33■■□□□ 1.65
NUP50-213ENST00000461437 FANCAO15360 1455 aa25.33■■□□□ 1.65
NUP50-213ENST00000461437 PHLDB1Q86UU1 1377 aa25.32■■□□□ 1.64
NUP50-213ENST00000461437 CFAP74Q9C0B2 1584 aa25.31■■□□□ 1.64
NUP50-213ENST00000461437 AKNAQ7Z591 1439 aa25.3■■□□□ 1.64
NUP50-213ENST00000461437 MYO5CQ9NQX4 1742 aa25.3■■□□□ 1.64
NUP50-213ENST00000461437 CLIP1P30622 1438 aa25.27■■□□□ 1.64
NUP50-213ENST00000461437 DENND4BO75064 1496 aaPredicted RBP25.26■■□□□ 1.63
NUP50-213ENST00000461437 TROQ12816 1431 aaPredicted RBP25.24■■□□□ 1.63
NUP50-213ENST00000461437 CASKIN1Q8WXD9 1431 aa25.24■■□□□ 1.63
NUP50-213ENST00000461437 PLCH2O75038 1416 aa25.22■■□□□ 1.63
NUP50-213ENST00000461437 CDK11AQ9UQ88 783 aaPredicted RBP25.21■■□□□ 1.63
NUP50-213ENST00000461437 ARHGEF40Q8TER5 1519 aa25.2■■□□□ 1.62
NUP50-213ENST00000461437 ILDR1Q86SU0 546 aaPredicted RBP25.18■■□□□ 1.62
NUP50-213ENST00000461437 SIGLEC1Q9BZZ2 1709 aa25.17■■□□□ 1.62
NUP50-213ENST00000461437 CDC42BPBQ9Y5S2 1711 aa25.17■■□□□ 1.62
NUP50-213ENST00000461437 CCDC18Q5T9S5 1454 aa25.17■■□□□ 1.62
NUP50-213ENST00000461437 FYCO1Q9BQS8 1478 aa25.16■■□□□ 1.62
NUP50-213ENST00000461437 SCAPERQ9BY12 1400 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms