RNA–Protein interactions for RNA: ENST00000461434.1

PSMD4-207, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 801 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-207ENST00000461434 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
PSMD4-207ENST00000461434 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
PSMD4-207ENST00000461434 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
PSMD4-207ENST00000461434 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
PSMD4-207ENST00000461434 ERICH3Q5RHP9 1530 aa18.85■□□□□ 0.61
PSMD4-207ENST00000461434 NUP160Q12769 1436 aa18.81■□□□□ 0.6
PSMD4-207ENST00000461434 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
PSMD4-207ENST00000461434 SLC4A1APQ9BWU0 796 aaKnown RBP18.75■□□□□ 0.59
PSMD4-207ENST00000461434 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
PSMD4-207ENST00000461434 SHROOM2Q13796 1616 aa18.71■□□□□ 0.58
PSMD4-207ENST00000461434 NCBP3Q53F19 620 aaKnown RBP18.68■□□□□ 0.58
PSMD4-207ENST00000461434 IGF1RP08069 1367 aa18.67■□□□□ 0.58
PSMD4-207ENST00000461434 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
PSMD4-207ENST00000461434 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
PSMD4-207ENST00000461434 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
PSMD4-207ENST00000461434 JPH4Q96JJ6 628 aa18.65■□□□□ 0.58
PSMD4-207ENST00000461434 CUL7Q14999 1698 aa18.64■□□□□ 0.57
PSMD4-207ENST00000461434 CARMIL1Q5VZK9 1371 aa18.57■□□□□ 0.56
PSMD4-207ENST00000461434 KIAA0586Q9BVV6 1533 aa18.54■□□□□ 0.56
PSMD4-207ENST00000461434 TTBK1Q5TCY1 1321 aaPredicted RBP18.52■□□□□ 0.56
PSMD4-207ENST00000461434 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
PSMD4-207ENST00000461434 NPM1P06748 294 aaKnown RBP eCLIP18.44■□□□□ 0.54
PSMD4-207ENST00000461434 IQGAP2Q13576 1575 aa18.43■□□□□ 0.54
PSMD4-207ENST00000461434 ADCY10Q96PN6 1610 aa18.43■□□□□ 0.54
PSMD4-207ENST00000461434 RAPGEF2Q9Y4G8 1499 aa18.41■□□□□ 0.54
PSMD4-207ENST00000461434 KIF13AQ9H1H9 1805 aa18.39■□□□□ 0.54
PSMD4-207ENST00000461434 PTPRGP23470 1445 aa18.39■□□□□ 0.53
PSMD4-207ENST00000461434 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
PSMD4-207ENST00000461434 TNIKQ9UKE5 1360 aa18.35■□□□□ 0.53
PSMD4-207ENST00000461434 FAM69CQ0P6D2 419 aa18.35■□□□□ 0.53
PSMD4-207ENST00000461434 MAPKBP1O60336 1514 aa18.33■□□□□ 0.52
PSMD4-207ENST00000461434 DISP1Q96F81 1524 aa18.31■□□□□ 0.52
PSMD4-207ENST00000461434 ABCC10Q5T3U5 1492 aa18.3■□□□□ 0.52
PSMD4-207ENST00000461434 DIP2BQ9P265 1576 aa18.29■□□□□ 0.52
PSMD4-207ENST00000461434 CTTNBP2Q8WZ74 1663 aa18.28■□□□□ 0.52
PSMD4-207ENST00000461434 UGGT2Q9NYU1 1516 aa18.28■□□□□ 0.52
PSMD4-207ENST00000461434 KIAA0556O60303 1618 aa18.27■□□□□ 0.51
PSMD4-207ENST00000461434 TSPOAP1O95153 1857 aa18.26■□□□□ 0.51
PSMD4-207ENST00000461434 ABCC2Q92887 1545 aa18.24■□□□□ 0.51
PSMD4-207ENST00000461434 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
PSMD4-207ENST00000461434 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
PSMD4-207ENST00000461434 PRXQ9BXM0 1461 aa18.23■□□□□ 0.51
PSMD4-207ENST00000461434 ASXL2Q76L83 1435 aa18.2■□□□□ 0.5
PSMD4-207ENST00000461434 UHRF1BP1LA0JNW5 1464 aa18.2■□□□□ 0.5
PSMD4-207ENST00000461434 FAM9AQ8IZU1 332 aaPredicted RBP18.18■□□□□ 0.5
PSMD4-207ENST00000461434 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
PSMD4-207ENST00000461434 GOLGA3Q08378 1498 aa18.16■□□□□ 0.5
PSMD4-207ENST00000461434 PLB1Q6P1J6 1458 aa18.15■□□□□ 0.5
PSMD4-207ENST00000461434 ZCCHC11Q5TAX3 1644 aaKnown RBP18.15■□□□□ 0.5
PSMD4-207ENST00000461434 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
PSMD4-207ENST00000461434 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
PSMD4-207ENST00000461434 KDM6BO15054 1643 aa18.12■□□□□ 0.49
PSMD4-207ENST00000461434 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
PSMD4-207ENST00000461434 ARID3CA6NKF2 412 aa18.09■□□□□ 0.49
PSMD4-207ENST00000461434 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.48
PSMD4-207ENST00000461434 EEA1Q15075 1411 aa18.07■□□□□ 0.48
PSMD4-207ENST00000461434 ZBTB22O15209 634 aa18.07■□□□□ 0.48
PSMD4-207ENST00000461434 ABCA8O94911 1581 aa18.07■□□□□ 0.48
PSMD4-207ENST00000461434 GLI2P10070 1586 aa18.07■□□□□ 0.48
PSMD4-207ENST00000461434 PPRC1Q5VV67 1664 aaKnown RBP18.06■□□□□ 0.48
PSMD4-207ENST00000461434 WDR7Q9Y4E6 1490 aa18.03■□□□□ 0.48
PSMD4-207ENST00000461434 MSH5O43196 834 aa18.02■□□□□ 0.48
PSMD4-207ENST00000461434 KCNH8Q96L42 1107 aa18.02■□□□□ 0.48
PSMD4-207ENST00000461434 MAP3K4Q9Y6R4 1608 aa18.01■□□□□ 0.47
PSMD4-207ENST00000461434 SAMD9Q5K651 1589 aa18■□□□□ 0.47
PSMD4-207ENST00000461434 FHOD3Q2V2M9 1422 aa17.97■□□□□ 0.47
PSMD4-207ENST00000461434 TEX14Q8IWB6 1497 aa17.95■□□□□ 0.46
PSMD4-207ENST00000461434 KIF21BO75037 1637 aa17.95■□□□□ 0.46
PSMD4-207ENST00000461434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
PSMD4-207ENST00000461434 HNRNPUL2Q1KMD3 747 aaKnown RBP17.94■□□□□ 0.46
PSMD4-207ENST00000461434 RAPGEF6Q8TEU7 1601 aa17.94■□□□□ 0.46
PSMD4-207ENST00000461434 ATP10BO94823 1461 aa17.93■□□□□ 0.46
PSMD4-207ENST00000461434 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
PSMD4-207ENST00000461434 COL17A1Q9UMD9 1497 aaPredicted RBP17.92■□□□□ 0.46
PSMD4-207ENST00000461434 CD109Q6YHK3 1445 aa17.91■□□□□ 0.46
PSMD4-207ENST00000461434 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
PSMD4-207ENST00000461434 CFAP43Q8NDM7 1665 aa17.9■□□□□ 0.46
PSMD4-207ENST00000461434 KDM4FA0A1W2PPD8 638 aa17.86■□□□□ 0.45
PSMD4-207ENST00000461434 NUP153P49790 1475 aaKnown RBP17.85■□□□□ 0.45
PSMD4-207ENST00000461434 MAGI3Q5TCQ9 1506 aa17.85■□□□□ 0.45
PSMD4-207ENST00000461434 EFCAB5A4FU69 1503 aa17.84■□□□□ 0.45
PSMD4-207ENST00000461434 ATP1B4Q9UN42 357 aaPredicted RBP17.8■□□□□ 0.44
PSMD4-207ENST00000461434 ADGRL1O94910 1474 aa17.78■□□□□ 0.44
PSMD4-207ENST00000461434 ABCA9Q8IUA7 1624 aa17.78■□□□□ 0.44
PSMD4-207ENST00000461434 PLEKHD1A6NEE1 506 aa17.75■□□□□ 0.43
PSMD4-207ENST00000461434 CDK13Q14004 1512 aaKnown RBP17.74■□□□□ 0.43
PSMD4-207ENST00000461434 ARHGAP35Q9NRY4 1499 aa17.74■□□□□ 0.43
PSMD4-207ENST00000461434 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
PSMD4-207ENST00000461434 ARAP3Q8WWN8 1544 aa17.69■□□□□ 0.42
PSMD4-207ENST00000461434 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
PSMD4-207ENST00000461434 FMN1Q68DA7 1419 aa17.69■□□□□ 0.42
PSMD4-207ENST00000461434 HECW1Q76N89 1606 aa17.69■□□□□ 0.42
PSMD4-207ENST00000461434 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
PSMD4-207ENST00000461434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.67■□□□□ 0.42
PSMD4-207ENST00000461434 TTC37Q6PGP7 1564 aa17.66■□□□□ 0.42
PSMD4-207ENST00000461434 NEO1Q92859 1461 aa17.66■□□□□ 0.42
PSMD4-207ENST00000461434 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
PSMD4-207ENST00000461434 FANCAO15360 1455 aa17.62■□□□□ 0.41
PSMD4-207ENST00000461434 FRMPD1Q5SYB0 1578 aa17.62■□□□□ 0.41
PSMD4-207ENST00000461434 AKNAQ7Z591 1439 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms