RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ERCC6L2Q5T890 1561 aa38.23■■■■□ 3.71
TRAF4-207ENST00000461195 JPH4Q96JJ6 628 aa38.18■■■■□ 3.7
TRAF4-207ENST00000461195 KIAA0586Q9BVV6 1533 aa38.14■■■■□ 3.7
TRAF4-207ENST00000461195 PRG4Q92954 1404 aaPredicted RBP38.12■■■■□ 3.69
TRAF4-207ENST00000461195 RAPGEF2Q9Y4G8 1499 aa38.05■■■■□ 3.68
TRAF4-207ENST00000461195 IQGAP2Q13576 1575 aa37.91■■■■□ 3.66
TRAF4-207ENST00000461195 PRXQ9BXM0 1461 aa37.84■■■■□ 3.65
TRAF4-207ENST00000461195 EEA1Q15075 1411 aa37.76■■■■□ 3.63
TRAF4-207ENST00000461195 CARMIL2Q6F5E8 1435 aa37.76■■■■□ 3.63
TRAF4-207ENST00000461195 CSRNP3Q8WYN3 585 aa37.74■■■■□ 3.63
TRAF4-207ENST00000461195 CTTNBP2Q8WZ74 1663 aa37.74■■■■□ 3.63
TRAF4-207ENST00000461195 CHIC1Q5VXU3 224 aa37.72■■■■□ 3.63
TRAF4-207ENST00000461195 UGGT2Q9NYU1 1516 aa37.69■■■■□ 3.62
TRAF4-207ENST00000461195 TNIKQ9UKE5 1360 aa37.65■■■■□ 3.62
TRAF4-207ENST00000461195 PTPRGP23470 1445 aa37.64■■■■□ 3.62
TRAF4-207ENST00000461195 DISP1Q96F81 1524 aa37.64■■■■□ 3.62
TRAF4-207ENST00000461195 AEBP2Q6ZN18 517 aaPredicted RBP37.61■■■■□ 3.61
TRAF4-207ENST00000461195 ADCY10Q96PN6 1610 aa37.6■■■■□ 3.61
TRAF4-207ENST00000461195 FAM9AQ8IZU1 332 aaPredicted RBP37.55■■■■□ 3.6
TRAF4-207ENST00000461195 TTBK1Q5TCY1 1321 aaPredicted RBP37.55■■■■□ 3.6
TRAF4-207ENST00000461195 KIAA0556O60303 1618 aa37.54■■■■□ 3.6
TRAF4-207ENST00000461195 NPM1P06748 294 aaKnown RBP eCLIP37.53■■■■□ 3.6
TRAF4-207ENST00000461195 GOLGA3Q08378 1498 aa37.46■■■■□ 3.59
TRAF4-207ENST00000461195 MAPKBP1O60336 1514 aa37.41■■■■□ 3.58
TRAF4-207ENST00000461195 KIF21BO75037 1637 aa37.39■■■■□ 3.58
TRAF4-207ENST00000461195 UACAQ9BZF9 1416 aa37.38■■■■□ 3.57
TRAF4-207ENST00000461195 UHRF1BP1LA0JNW5 1464 aa37.37■■■■□ 3.57
TRAF4-207ENST00000461195 KIF13AQ9H1H9 1805 aa37.36■■■■□ 3.57
TRAF4-207ENST00000461195 ABCC2Q92887 1545 aa37.34■■■■□ 3.57
TRAF4-207ENST00000461195 ABCC10Q5T3U5 1492 aa37.26■■■■□ 3.56
TRAF4-207ENST00000461195 SAMD9Q5K651 1589 aa37.21■■■■□ 3.55
TRAF4-207ENST00000461195 DIP2BQ9P265 1576 aa37.21■■■■□ 3.55
TRAF4-207ENST00000461195 FAM69CQ0P6D2 419 aa37.19■■■■□ 3.54
TRAF4-207ENST00000461195 KDM5BQ9UGL1 1544 aa37.19■■■■□ 3.54
TRAF4-207ENST00000461195 PLB1Q6P1J6 1458 aa37.19■■■■□ 3.54
TRAF4-207ENST00000461195 P3H3Q8IVL6 736 aa37.17■■■■□ 3.54
TRAF4-207ENST00000461195 ABCA8O94911 1581 aa37.15■■■■□ 3.54
TRAF4-207ENST00000461195 ZCCHC11Q5TAX3 1644 aaKnown RBP37.14■■■■□ 3.54
TRAF4-207ENST00000461195 ASXL2Q76L83 1435 aa37.13■■■■□ 3.53
TRAF4-207ENST00000461195 RANGAP1P46060 587 aaPredicted RBP37.1■■■■□ 3.53
TRAF4-207ENST00000461195 EHMT2Q96KQ7 1210 aa37.09■■■■□ 3.53
TRAF4-207ENST00000461195 UBTFP17480 764 aaKnown RBP37.07■■■■□ 3.52
TRAF4-207ENST00000461195 EFCAB5A4FU69 1503 aa37■■■■□ 3.51
TRAF4-207ENST00000461195 FHOD3Q2V2M9 1422 aa36.96■■■■□ 3.51
TRAF4-207ENST00000461195 GLI2P10070 1586 aa36.95■■■■□ 3.51
TRAF4-207ENST00000461195 TSPOAP1O95153 1857 aa36.93■■■■□ 3.5
TRAF4-207ENST00000461195 RAPGEF6Q8TEU7 1601 aa36.92■■■■□ 3.5
TRAF4-207ENST00000461195 EPRSP07814 1512 aaKnown RBP36.91■■■■□ 3.5
TRAF4-207ENST00000461195 WDR7Q9Y4E6 1490 aa36.9■■■■□ 3.5
TRAF4-207ENST00000461195 ATP10BO94823 1461 aa36.83■■■■□ 3.49
TRAF4-207ENST00000461195 KDM6BO15054 1643 aa36.82■■■■□ 3.49
TRAF4-207ENST00000461195 ARID3CA6NKF2 412 aa36.81■■■■□ 3.48
TRAF4-207ENST00000461195 MAP3K4Q9Y6R4 1608 aa36.78■■■■□ 3.48
TRAF4-207ENST00000461195 PPRC1Q5VV67 1664 aaKnown RBP36.76■■■■□ 3.47
TRAF4-207ENST00000461195 NUP153P49790 1475 aaKnown RBP36.75■■■■□ 3.47
TRAF4-207ENST00000461195 ARHGAP35Q9NRY4 1499 aa36.75■■■■□ 3.47
TRAF4-207ENST00000461195 KCNH8Q96L42 1107 aa36.72■■■■□ 3.47
TRAF4-207ENST00000461195 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.67■■■■□ 3.46
TRAF4-207ENST00000461195 HNRNPUL2Q1KMD3 747 aaKnown RBP36.67■■■■□ 3.46
TRAF4-207ENST00000461195 FMN1Q68DA7 1419 aa36.66■■■■□ 3.46
TRAF4-207ENST00000461195 CFAP43Q8NDM7 1665 aa36.65■■■■□ 3.46
TRAF4-207ENST00000461195 TEX14Q8IWB6 1497 aa36.63■■■■□ 3.45
TRAF4-207ENST00000461195 KDM4FA0A1W2PPD8 638 aa36.62■■■■□ 3.45
TRAF4-207ENST00000461195 CD109Q6YHK3 1445 aa36.59■■■■□ 3.45
TRAF4-207ENST00000461195 MAGI3Q5TCQ9 1506 aa36.54■■■■□ 3.44
TRAF4-207ENST00000461195 HECW1Q76N89 1606 aa36.52■■■■□ 3.44
TRAF4-207ENST00000461195 ABCA9Q8IUA7 1624 aa36.51■■■■□ 3.43
TRAF4-207ENST00000461195 PLEKHD1A6NEE1 506 aa36.5■■■■□ 3.43
TRAF4-207ENST00000461195 ATP1B4Q9UN42 357 aaPredicted RBP36.48■■■■□ 3.43
TRAF4-207ENST00000461195 CDK13Q14004 1512 aaKnown RBP36.48■■■■□ 3.43
TRAF4-207ENST00000461195 CLIP1P30622 1438 aa36.46■■■■□ 3.43
TRAF4-207ENST00000461195 COL17A1Q9UMD9 1497 aaPredicted RBP36.41■■■■□ 3.42
TRAF4-207ENST00000461195 PCF11O94913 1555 aaKnown RBP36.34■■■■□ 3.41
TRAF4-207ENST00000461195 CASKIN1Q8WXD9 1431 aa36.34■■■■□ 3.41
TRAF4-207ENST00000461195 LRRIQ1Q96JM4 1722 aa36.32■■■■□ 3.4
TRAF4-207ENST00000461195 CDK11AQ9UQ88 783 aaPredicted RBP36.31■■■■□ 3.4
TRAF4-207ENST00000461195 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.29■■■■□ 3.42e-6■■■□□ 16.3
TRAF4-207ENST00000461195 PHLDB1Q86UU1 1377 aa36.26■■■■□ 3.39
TRAF4-207ENST00000461195 FYCO1Q9BQS8 1478 aa36.24■■■■□ 3.39
TRAF4-207ENST00000461195 ADGRL1O94910 1474 aa36.24■■■■□ 3.39
TRAF4-207ENST00000461195 CCDC18Q5T9S5 1454 aa36.24■■■■□ 3.39
TRAF4-207ENST00000461195 TTC37Q6PGP7 1564 aa36.23■■■■□ 3.39
TRAF4-207ENST00000461195 CEP162Q5TB80 1403 aa36.23■■■■□ 3.39
TRAF4-207ENST00000461195 NEO1Q92859 1461 aa36.23■■■■□ 3.39
TRAF4-207ENST00000461195 ARAP3Q8WWN8 1544 aa36.23■■■■□ 3.39
TRAF4-207ENST00000461195 TROQ12816 1431 aaPredicted RBP36.18■■■■□ 3.38
TRAF4-207ENST00000461195 LOC105371045A0A1W2PR82 267 aa36.18■■■■□ 3.38
TRAF4-207ENST00000461195 KIF14Q15058 1648 aa36.14■■■■□ 3.38
TRAF4-207ENST00000461195 CFAP74Q9C0B2 1584 aa36.13■■■■□ 3.37
TRAF4-207ENST00000461195 FANCAO15360 1455 aa36.11■■■■□ 3.37
TRAF4-207ENST00000461195 MYO5CQ9NQX4 1742 aa36.07■■■■□ 3.36
TRAF4-207ENST00000461195 PLCH2O75038 1416 aa36.07■■■■□ 3.36
TRAF4-207ENST00000461195 AKNAQ7Z591 1439 aa36.06■■■■□ 3.36
TRAF4-207ENST00000461195 RAPGEF3O95398 923 aa36.01■■■■□ 3.36
TRAF4-207ENST00000461195 FRMPD1Q5SYB0 1578 aa35.98■■■■□ 3.35
TRAF4-207ENST00000461195 DENND4BO75064 1496 aaPredicted RBP35.97■■■■□ 3.35
TRAF4-207ENST00000461195 RICTORQ6R327 1708 aa35.94■■■■□ 3.34
TRAF4-207ENST00000461195 EFCAB2Q5VUJ9 269 aa35.93■■■■□ 3.34
TRAF4-207ENST00000461195 ARHGAP5Q13017 1502 aa35.9■■■■□ 3.34
TRAF4-207ENST00000461195 CDC42BPBQ9Y5S2 1711 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms