RNA–Protein interactions for RNA: ENST00000461071.1

SLC39A1-208, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-208ENST00000461071 AEBP2Q6ZN18 517 aaPredicted RBP30.74■■■□□ 2.51
SLC39A1-208ENST00000461071 CUL7Q14999 1698 aa30.73■■■□□ 2.51
SLC39A1-208ENST00000461071 IGF1RP08069 1367 aa30.69■■■□□ 2.5
SLC39A1-208ENST00000461071 KIAA0586Q9BVV6 1533 aa30.69■■■□□ 2.5
SLC39A1-208ENST00000461071 MAPKBP1O60336 1514 aa30.68■■■□□ 2.5
SLC39A1-208ENST00000461071 KIF27Q86VH2 1401 aa30.67■■■□□ 2.5
SLC39A1-208ENST00000461071 ADCY10Q96PN6 1610 aa30.65■■■□□ 2.5
SLC39A1-208ENST00000461071 ABCC10Q5T3U5 1492 aa30.63■■■□□ 2.49
SLC39A1-208ENST00000461071 NPM1P06748 294 aaKnown RBP eCLIP30.58■■■□□ 2.49
SLC39A1-208ENST00000461071 DIP2BQ9P265 1576 aa30.57■■■□□ 2.48
SLC39A1-208ENST00000461071 FAM69CQ0P6D2 419 aa30.52■■■□□ 2.48
SLC39A1-208ENST00000461071 CARMIL1Q5VZK9 1371 aa30.46■■■□□ 2.47
SLC39A1-208ENST00000461071 PTPRGP23470 1445 aa30.39■■■□□ 2.46
SLC39A1-208ENST00000461071 TSPOAP1O95153 1857 aa30.38■■■□□ 2.45
SLC39A1-208ENST00000461071 IQGAP2Q13576 1575 aa30.37■■■□□ 2.45
SLC39A1-208ENST00000461071 CARMIL2Q6F5E8 1435 aa30.36■■■□□ 2.45
SLC39A1-208ENST00000461071 TNIKQ9UKE5 1360 aa30.33■■■□□ 2.45
SLC39A1-208ENST00000461071 KDM6BO15054 1643 aa30.33■■■□□ 2.45
SLC39A1-208ENST00000461071 ABCC2Q92887 1545 aa30.32■■■□□ 2.44
SLC39A1-208ENST00000461071 UHRF1BP1LA0JNW5 1464 aa30.27■■■□□ 2.44
SLC39A1-208ENST00000461071 DISP1Q96F81 1524 aa30.23■■■□□ 2.43
SLC39A1-208ENST00000461071 GLI2P10070 1586 aa30.23■■■□□ 2.43
SLC39A1-208ENST00000461071 PLB1Q6P1J6 1458 aa30.21■■■□□ 2.43
SLC39A1-208ENST00000461071 ASXL2Q76L83 1435 aa30.2■■■□□ 2.42
SLC39A1-208ENST00000461071 UGGT2Q9NYU1 1516 aa30.19■■■□□ 2.42
SLC39A1-208ENST00000461071 PPRC1Q5VV67 1664 aaKnown RBP30.19■■■□□ 2.42
SLC39A1-208ENST00000461071 RAPGEF2Q9Y4G8 1499 aa30.19■■■□□ 2.42
SLC39A1-208ENST00000461071 UACAQ9BZF9 1416 aa30.17■■■□□ 2.42
SLC39A1-208ENST00000461071 TTBK1Q5TCY1 1321 aaPredicted RBP30.13■■■□□ 2.41
SLC39A1-208ENST00000461071 KDM5BQ9UGL1 1544 aa30.12■■■□□ 2.41
SLC39A1-208ENST00000461071 KIAA0556O60303 1618 aa30.09■■■□□ 2.41
SLC39A1-208ENST00000461071 KDM4FA0A1W2PPD8 638 aa30.07■■■□□ 2.4
SLC39A1-208ENST00000461071 MAP3K4Q9Y6R4 1608 aa30.06■■■□□ 2.4
SLC39A1-208ENST00000461071 ZCCHC11Q5TAX3 1644 aaKnown RBP30.05■■■□□ 2.4
SLC39A1-208ENST00000461071 CTTNBP2Q8WZ74 1663 aa30.04■■■□□ 2.4
SLC39A1-208ENST00000461071 EPRSP07814 1512 aaKnown RBP30.02■■■□□ 2.4
SLC39A1-208ENST00000461071 TEX14Q8IWB6 1497 aa29.93■■■□□ 2.38
SLC39A1-208ENST00000461071 COL17A1Q9UMD9 1497 aaPredicted RBP29.91■■■□□ 2.38
SLC39A1-208ENST00000461071 GOLGA3Q08378 1498 aa29.9■■■□□ 2.38
SLC39A1-208ENST00000461071 WDR7Q9Y4E6 1490 aa29.88■■■□□ 2.37
SLC39A1-208ENST00000461071 PRXQ9BXM0 1461 aa29.85■■■□□ 2.37
SLC39A1-208ENST00000461071 ABCA8O94911 1581 aa29.85■■■□□ 2.37
SLC39A1-208ENST00000461071 CFAP43Q8NDM7 1665 aa29.82■■■□□ 2.36
SLC39A1-208ENST00000461071 ADGRL1O94910 1474 aa29.8■■■□□ 2.36
SLC39A1-208ENST00000461071 MAGI3Q5TCQ9 1506 aa29.75■■■□□ 2.35
SLC39A1-208ENST00000461071 CD109Q6YHK3 1445 aa29.7■■■□□ 2.34
SLC39A1-208ENST00000461071 KCNH8Q96L42 1107 aa29.61■■■□□ 2.33
SLC39A1-208ENST00000461071 SAMD9Q5K651 1589 aa29.58■■■□□ 2.33
SLC39A1-208ENST00000461071 ARAP3Q8WWN8 1544 aa29.55■■■□□ 2.32
SLC39A1-208ENST00000461071 ATP10BO94823 1461 aa29.55■■■□□ 2.32
SLC39A1-208ENST00000461071 FAM9AQ8IZU1 332 aaPredicted RBP29.55■■■□□ 2.32
SLC39A1-208ENST00000461071 ABCA9Q8IUA7 1624 aa29.53■■■□□ 2.32
SLC39A1-208ENST00000461071 CSRNP3Q8WYN3 585 aa29.49■■■□□ 2.31
SLC39A1-208ENST00000461071 RAPGEF6Q8TEU7 1601 aa29.48■■■□□ 2.31
SLC39A1-208ENST00000461071 HECW2Q9P2P5 1572 aa29.47■■■□□ 2.31
SLC39A1-208ENST00000461071 PHLDB1Q86UU1 1377 aa29.46■■■□□ 2.31
SLC39A1-208ENST00000461071 KIF21BO75037 1637 aa29.45■■■□□ 2.31
SLC39A1-208ENST00000461071 P3H3Q8IVL6 736 aa29.45■■■□□ 2.31
SLC39A1-208ENST00000461071 EEA1Q15075 1411 aa29.4■■■□□ 2.3
SLC39A1-208ENST00000461071 ARID3CA6NKF2 412 aa29.38■■■□□ 2.29
SLC39A1-208ENST00000461071 NEO1Q92859 1461 aa29.37■■■□□ 2.29
SLC39A1-208ENST00000461071 NUP153P49790 1475 aaKnown RBP29.35■■■□□ 2.29
SLC39A1-208ENST00000461071 ILDR1Q86SU0 546 aaPredicted RBP29.33■■■□□ 2.29
SLC39A1-208ENST00000461071 ADAMTSL3P82987 1691 aa29.3■■■□□ 2.28
SLC39A1-208ENST00000461071 FRMPD1Q5SYB0 1578 aa29.26■■■□□ 2.28
SLC39A1-208ENST00000461071 FHOD3Q2V2M9 1422 aa29.23■■■□□ 2.27
SLC39A1-208ENST00000461071 RAPGEF3O95398 923 aa29.23■■■□□ 2.27
SLC39A1-208ENST00000461071 EFCAB5A4FU69 1503 aa29.22■■■□□ 2.27
SLC39A1-208ENST00000461071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.21■■■□□ 2.27
SLC39A1-208ENST00000461071 HNRNPUL2Q1KMD3 747 aaKnown RBP29.21■■■□□ 2.27
SLC39A1-208ENST00000461071 BCORL1Q5H9F3 1711 aa29.2■■■□□ 2.26
SLC39A1-208ENST00000461071 RICTORQ6R327 1708 aa29.19■■■□□ 2.26
SLC39A1-208ENST00000461071 PTPRMP28827 1452 aa29.17■■■□□ 2.26
SLC39A1-208ENST00000461071 CFAP74Q9C0B2 1584 aa29.16■■■□□ 2.26
SLC39A1-208ENST00000461071 PLEKHD1A6NEE1 506 aa29.15■■■□□ 2.26
SLC39A1-208ENST00000461071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.13■■■□□ 2.256e-6■■■■□ 21.5
SLC39A1-208ENST00000461071 ARHGEF40Q8TER5 1519 aa29.12■■■□□ 2.25
SLC39A1-208ENST00000461071 RANGAP1P46060 587 aaPredicted RBP29.1■■■□□ 2.25
SLC39A1-208ENST00000461071 AKNAQ7Z591 1439 aa29.1■■■□□ 2.25
SLC39A1-208ENST00000461071 DENND4BO75064 1496 aaPredicted RBP29.1■■■□□ 2.25
SLC39A1-208ENST00000461071 FANCAO15360 1455 aa29.09■■■□□ 2.25
SLC39A1-208ENST00000461071 TTC37Q6PGP7 1564 aa29.09■■■□□ 2.25
SLC39A1-208ENST00000461071 MADDQ8WXG6 1647 aa29.09■■■□□ 2.25
SLC39A1-208ENST00000461071 ZMYM4Q5VZL5 1548 aa29.05■■■□□ 2.24
SLC39A1-208ENST00000461071 ARID4BQ4LE39 1312 aaPredicted RBP28.99■■■□□ 2.23
SLC39A1-208ENST00000461071 CDK13Q14004 1512 aaKnown RBP28.99■■■□□ 2.23
SLC39A1-208ENST00000461071 RIMS1Q86UR5 1692 aaKnown RBP28.99■■■□□ 2.23
SLC39A1-208ENST00000461071 MAGI2Q86UL8 1455 aa28.97■■■□□ 2.23
SLC39A1-208ENST00000461071 PCF11O94913 1555 aaKnown RBP28.97■■■□□ 2.23
SLC39A1-208ENST00000461071 ZFYVE16Q7Z3T8 1539 aa28.94■■■□□ 2.22
SLC39A1-208ENST00000461071 SIGLEC1Q9BZZ2 1709 aa28.94■■■□□ 2.22
SLC39A1-208ENST00000461071 PLCH2O75038 1416 aa28.94■■■□□ 2.22
SLC39A1-208ENST00000461071 HECW1Q76N89 1606 aa28.93■■■□□ 2.22
SLC39A1-208ENST00000461071 FMN1Q68DA7 1419 aa28.93■■■□□ 2.22
SLC39A1-208ENST00000461071 LMTK3Q96Q04 1460 aa28.92■■■□□ 2.22
SLC39A1-208ENST00000461071 MYO5CQ9NQX4 1742 aa28.92■■■□□ 2.22
SLC39A1-208ENST00000461071 POGZQ7Z3K3 1410 aa28.91■■■□□ 2.22
SLC39A1-208ENST00000461071 YEATS2Q9ULM3 1422 aa28.88■■■□□ 2.21
SLC39A1-208ENST00000461071 ARHGAP35Q9NRY4 1499 aa28.88■■■□□ 2.21
SLC39A1-208ENST00000461071 SCAPERQ9BY12 1400 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms