RNA–Protein interactions for RNA: ENST00000460834.1

LST1-218, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-218ENST00000460834 JPH4Q96JJ6 628 aa32.55■■■□□ 2.8
LST1-218ENST00000460834 PRG4Q92954 1404 aaPredicted RBP32.5■■■□□ 2.79
LST1-218ENST00000460834 KIAA0586Q9BVV6 1533 aa32.49■■■□□ 2.79
LST1-218ENST00000460834 RAPGEF2Q9Y4G8 1499 aa32.36■■■□□ 2.77
LST1-218ENST00000460834 IQGAP2Q13576 1575 aa32.26■■■□□ 2.75
LST1-218ENST00000460834 TRHP20396 242 aaPredicted RBP32.23■■■□□ 2.75
LST1-218ENST00000460834 PRXQ9BXM0 1461 aa32.22■■■□□ 2.75
LST1-218ENST00000460834 CTTNBP2Q8WZ74 1663 aa32.14■■■□□ 2.74
LST1-218ENST00000460834 DISP1Q96F81 1524 aa32.1■■■□□ 2.73
LST1-218ENST00000460834 UGGT2Q9NYU1 1516 aa32.1■■■□□ 2.73
LST1-218ENST00000460834 CSRNP3Q8WYN3 585 aa32.1■■■□□ 2.73
LST1-218ENST00000460834 ADCY10Q96PN6 1610 aa32.09■■■□□ 2.73
LST1-218ENST00000460834 CARMIL2Q6F5E8 1435 aa32.09■■■□□ 2.73
LST1-218ENST00000460834 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
LST1-218ENST00000460834 PTPRGP23470 1445 aa32.06■■■□□ 2.72
LST1-218ENST00000460834 TNIKQ9UKE5 1360 aa32.05■■■□□ 2.72
LST1-218ENST00000460834 EEA1Q15075 1411 aa32.01■■■□□ 2.72
LST1-218ENST00000460834 KIAA0556O60303 1618 aa31.97■■■□□ 2.71
LST1-218ENST00000460834 TTBK1Q5TCY1 1321 aaPredicted RBP31.96■■■□□ 2.71
LST1-218ENST00000460834 KIF13AQ9H1H9 1805 aa31.95■■■□□ 2.7
LST1-218ENST00000460834 FAM9AQ8IZU1 332 aaPredicted RBP31.91■■■□□ 2.7
LST1-218ENST00000460834 MAPKBP1O60336 1514 aa31.9■■■□□ 2.7
LST1-218ENST00000460834 NPM1P06748 294 aaKnown RBP eCLIP31.9■■■□□ 2.7
LST1-218ENST00000460834 UHRF1BP1LA0JNW5 1464 aa31.85■■■□□ 2.69
LST1-218ENST00000460834 UACAQ9BZF9 1416 aa31.84■■■□□ 2.69
LST1-218ENST00000460834 GOLGA3Q08378 1498 aa31.83■■■□□ 2.69
LST1-218ENST00000460834 ABCC2Q92887 1545 aa31.81■■■□□ 2.68
LST1-218ENST00000460834 ABCC10Q5T3U5 1492 aa31.8■■■□□ 2.68
LST1-218ENST00000460834 KIF21BO75037 1637 aa31.78■■■□□ 2.68
LST1-218ENST00000460834 DIP2BQ9P265 1576 aa31.76■■■□□ 2.67
LST1-218ENST00000460834 KDM5BQ9UGL1 1544 aa31.71■■■□□ 2.67
LST1-218ENST00000460834 FAM69CQ0P6D2 419 aa31.71■■■□□ 2.67
LST1-218ENST00000460834 SAMD9Q5K651 1589 aa31.7■■■□□ 2.67
LST1-218ENST00000460834 PLB1Q6P1J6 1458 aa31.69■■■□□ 2.66
LST1-218ENST00000460834 ABCA8O94911 1581 aa31.68■■■□□ 2.66
LST1-218ENST00000460834 ZCCHC11Q5TAX3 1644 aaKnown RBP31.67■■■□□ 2.66
LST1-218ENST00000460834 P3H3Q8IVL6 736 aa31.65■■■□□ 2.66
LST1-218ENST00000460834 ASXL2Q76L83 1435 aa31.65■■■□□ 2.66
LST1-218ENST00000460834 TSPOAP1O95153 1857 aa31.56■■■□□ 2.64
LST1-218ENST00000460834 GLI2P10070 1586 aa31.54■■■□□ 2.64
LST1-218ENST00000460834 RANGAP1P46060 587 aaPredicted RBP31.52■■■□□ 2.64
LST1-218ENST00000460834 EHMT2Q96KQ7 1210 aa31.51■■■□□ 2.63
LST1-218ENST00000460834 EPRSP07814 1512 aaKnown RBP31.48■■■□□ 2.63
LST1-218ENST00000460834 PPRC1Q5VV67 1664 aaKnown RBP31.45■■■□□ 2.63
LST1-218ENST00000460834 UBTFP17480 764 aaKnown RBP31.45■■■□□ 2.63
LST1-218ENST00000460834 FHOD3Q2V2M9 1422 aa31.45■■■□□ 2.63
LST1-218ENST00000460834 RAPGEF6Q8TEU7 1601 aa31.43■■■□□ 2.62
LST1-218ENST00000460834 EFCAB5A4FU69 1503 aa31.43■■■□□ 2.62
LST1-218ENST00000460834 ATP10BO94823 1461 aa31.41■■■□□ 2.62
LST1-218ENST00000460834 WDR7Q9Y4E6 1490 aa31.41■■■□□ 2.62
LST1-218ENST00000460834 MAP3K4Q9Y6R4 1608 aa31.4■■■□□ 2.62
LST1-218ENST00000460834 ARID3CA6NKF2 412 aa31.35■■■□□ 2.61
LST1-218ENST00000460834 NUP153P49790 1475 aaKnown RBP31.32■■■□□ 2.6
LST1-218ENST00000460834 ARHGAP35Q9NRY4 1499 aa31.29■■■□□ 2.6
LST1-218ENST00000460834 KDM6BO15054 1643 aa31.28■■■□□ 2.6
LST1-218ENST00000460834 KCNH8Q96L42 1107 aa31.28■■■□□ 2.6
LST1-218ENST00000460834 CFAP43Q8NDM7 1665 aa31.25■■■□□ 2.59
LST1-218ENST00000460834 CD109Q6YHK3 1445 aa31.17■■■□□ 2.58
LST1-218ENST00000460834 TEX14Q8IWB6 1497 aa31.15■■■□□ 2.58
LST1-218ENST00000460834 COL17A1Q9UMD9 1497 aaPredicted RBP31.15■■■□□ 2.58
LST1-218ENST00000460834 MAGI3Q5TCQ9 1506 aa31.14■■■□□ 2.58
LST1-218ENST00000460834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.13■■■□□ 2.57
LST1-218ENST00000460834 HNRNPUL2Q1KMD3 747 aaKnown RBP31.13■■■□□ 2.57
LST1-218ENST00000460834 ABCA9Q8IUA7 1624 aa31.13■■■□□ 2.57
LST1-218ENST00000460834 FMN1Q68DA7 1419 aa31.11■■■□□ 2.57
LST1-218ENST00000460834 CDK13Q14004 1512 aaKnown RBP31.06■■■□□ 2.56
LST1-218ENST00000460834 PLEKHD1A6NEE1 506 aa31.04■■■□□ 2.56
LST1-218ENST00000460834 LRRIQ1Q96JM4 1722 aa31.04■■■□□ 2.56
LST1-218ENST00000460834 HECW1Q76N89 1606 aa31.02■■■□□ 2.56
LST1-218ENST00000460834 ATP1B4Q9UN42 357 aaPredicted RBP30.96■■■□□ 2.55
LST1-218ENST00000460834 CLIP1P30622 1438 aa30.95■■■□□ 2.54
LST1-218ENST00000460834 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.93■■■□□ 2.54
LST1-218ENST00000460834 ARAP3Q8WWN8 1544 aa30.9■■■□□ 2.54
LST1-218ENST00000460834 PCF11O94913 1555 aaKnown RBP30.9■■■□□ 2.54
LST1-218ENST00000460834 CASKIN1Q8WXD9 1431 aa30.9■■■□□ 2.54
LST1-218ENST00000460834 TTC37Q6PGP7 1564 aa30.88■■■□□ 2.53
LST1-218ENST00000460834 NEO1Q92859 1461 aa30.85■■■□□ 2.53
LST1-218ENST00000460834 PHLDB1Q86UU1 1377 aa30.85■■■□□ 2.53
LST1-218ENST00000460834 LOC105371045A0A1W2PR82 267 aa30.79■■■□□ 2.52
LST1-218ENST00000460834 CDK11AQ9UQ88 783 aaPredicted RBP30.79■■■□□ 2.52
LST1-218ENST00000460834 KIF14Q15058 1648 aa30.79■■■□□ 2.52
LST1-218ENST00000460834 AEBP2Q6ZN18 517 aaPredicted RBP30.78■■■□□ 2.52
LST1-218ENST00000460834 TROQ12816 1431 aaPredicted RBP30.78■■■□□ 2.52
LST1-218ENST00000460834 FYCO1Q9BQS8 1478 aa30.77■■■□□ 2.52
LST1-218ENST00000460834 KDM4FA0A1W2PPD8 638 aa30.77■■■□□ 2.52
LST1-218ENST00000460834 CCDC18Q5T9S5 1454 aa30.76■■■□□ 2.51
LST1-218ENST00000460834 CEP162Q5TB80 1403 aa30.75■■■□□ 2.51
LST1-218ENST00000460834 FRMPD1Q5SYB0 1578 aa30.72■■■□□ 2.51
LST1-218ENST00000460834 FANCAO15360 1455 aa30.72■■■□□ 2.51
LST1-218ENST00000460834 RAPGEF3O95398 923 aa30.72■■■□□ 2.51
LST1-218ENST00000460834 PLCH2O75038 1416 aa30.72■■■□□ 2.51
LST1-218ENST00000460834 AKNAQ7Z591 1439 aa30.72■■■□□ 2.51
LST1-218ENST00000460834 MYO5CQ9NQX4 1742 aa30.71■■■□□ 2.51
LST1-218ENST00000460834 CFAP74Q9C0B2 1584 aa30.71■■■□□ 2.51
LST1-218ENST00000460834 RICTORQ6R327 1708 aa30.67■■■□□ 2.5
LST1-218ENST00000460834 DENND4BO75064 1496 aaPredicted RBP30.63■■■□□ 2.49
LST1-218ENST00000460834 ADGRL1O94910 1474 aa30.62■■■□□ 2.49
LST1-218ENST00000460834 CDC42BPBQ9Y5S2 1711 aa30.61■■■□□ 2.49
LST1-218ENST00000460834 EFCAB2Q5VUJ9 269 aa30.57■■■□□ 2.48
LST1-218ENST00000460834 CDC42BPAQ5VT25 1732 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms