RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
SLC6A1-203ENST00000460480 KIAA0586Q9BVV6 1533 aa25.74■■□□□ 1.71
SLC6A1-203ENST00000460480 CARMIL1Q5VZK9 1371 aa25.66■■□□□ 1.7
SLC6A1-203ENST00000460480 CUL7Q14999 1698 aa25.65■■□□□ 1.7
SLC6A1-203ENST00000460480 KIF13AQ9H1H9 1805 aa25.62■■□□□ 1.69
SLC6A1-203ENST00000460480 NPM1P06748 294 aaKnown RBP eCLIP25.58■■□□□ 1.69
SLC6A1-203ENST00000460480 ADCY10Q96PN6 1610 aa25.57■■□□□ 1.68
SLC6A1-203ENST00000460480 ABCC10Q5T3U5 1492 aa25.57■■□□□ 1.68
SLC6A1-203ENST00000460480 MAPKBP1O60336 1514 aa25.55■■□□□ 1.68
SLC6A1-203ENST00000460480 FAM69CQ0P6D2 419 aa25.55■■□□□ 1.68
SLC6A1-203ENST00000460480 PTPRGP23470 1445 aa25.5■■□□□ 1.67
SLC6A1-203ENST00000460480 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
SLC6A1-203ENST00000460480 TNIKQ9UKE5 1360 aa25.44■■□□□ 1.66
SLC6A1-203ENST00000460480 DIP2BQ9P265 1576 aa25.44■■□□□ 1.66
SLC6A1-203ENST00000460480 CARMIL2Q6F5E8 1435 aa25.43■■□□□ 1.66
SLC6A1-203ENST00000460480 IQGAP2Q13576 1575 aa25.4■■□□□ 1.66
SLC6A1-203ENST00000460480 DISP1Q96F81 1524 aa25.38■■□□□ 1.65
SLC6A1-203ENST00000460480 RAPGEF2Q9Y4G8 1499 aa25.38■■□□□ 1.65
SLC6A1-203ENST00000460480 TTBK1Q5TCY1 1321 aaPredicted RBP25.36■■□□□ 1.65
SLC6A1-203ENST00000460480 ABCC2Q92887 1545 aa25.34■■□□□ 1.65
SLC6A1-203ENST00000460480 UHRF1BP1LA0JNW5 1464 aa25.34■■□□□ 1.65
SLC6A1-203ENST00000460480 UGGT2Q9NYU1 1516 aa25.31■■□□□ 1.64
SLC6A1-203ENST00000460480 UACAQ9BZF9 1416 aa25.3■■□□□ 1.64
SLC6A1-203ENST00000460480 ASXL2Q76L83 1435 aa25.28■■□□□ 1.64
SLC6A1-203ENST00000460480 PLB1Q6P1J6 1458 aa25.25■■□□□ 1.63
SLC6A1-203ENST00000460480 KDM5BQ9UGL1 1544 aa25.22■■□□□ 1.63
SLC6A1-203ENST00000460480 TSPOAP1O95153 1857 aa25.21■■□□□ 1.63
SLC6A1-203ENST00000460480 GLI2P10070 1586 aa25.2■■□□□ 1.62
SLC6A1-203ENST00000460480 KDM6BO15054 1643 aa25.18■■□□□ 1.62
SLC6A1-203ENST00000460480 PRXQ9BXM0 1461 aa25.17■■□□□ 1.62
SLC6A1-203ENST00000460480 KIAA0556O60303 1618 aa25.17■■□□□ 1.62
SLC6A1-203ENST00000460480 KDM4FA0A1W2PPD8 638 aa25.13■■□□□ 1.61
SLC6A1-203ENST00000460480 PPRC1Q5VV67 1664 aaKnown RBP25.13■■□□□ 1.61
SLC6A1-203ENST00000460480 EPRSP07814 1512 aaKnown RBP25.12■■□□□ 1.61
SLC6A1-203ENST00000460480 ZCCHC11Q5TAX3 1644 aaKnown RBP25.08■■□□□ 1.6
SLC6A1-203ENST00000460480 COL17A1Q9UMD9 1497 aaPredicted RBP25.06■■□□□ 1.6
SLC6A1-203ENST00000460480 CTTNBP2Q8WZ74 1663 aa25.06■■□□□ 1.6
SLC6A1-203ENST00000460480 GOLGA3Q08378 1498 aa25.05■■□□□ 1.6
SLC6A1-203ENST00000460480 MAP3K4Q9Y6R4 1608 aa25.03■■□□□ 1.6
SLC6A1-203ENST00000460480 ABCA8O94911 1581 aa25.01■■□□□ 1.59
SLC6A1-203ENST00000460480 WDR7Q9Y4E6 1490 aa24.99■■□□□ 1.59
SLC6A1-203ENST00000460480 CSRNP3Q8WYN3 585 aa24.98■■□□□ 1.59
SLC6A1-203ENST00000460480 TEX14Q8IWB6 1497 aa24.93■■□□□ 1.58
SLC6A1-203ENST00000460480 KCNH8Q96L42 1107 aa24.91■■□□□ 1.58
SLC6A1-203ENST00000460480 P3H3Q8IVL6 736 aa24.89■■□□□ 1.58
SLC6A1-203ENST00000460480 CD109Q6YHK3 1445 aa24.87■■□□□ 1.57
SLC6A1-203ENST00000460480 MAGI3Q5TCQ9 1506 aa24.86■■□□□ 1.57
SLC6A1-203ENST00000460480 ATP10BO94823 1461 aa24.85■■□□□ 1.57
SLC6A1-203ENST00000460480 CFAP43Q8NDM7 1665 aa24.8■■□□□ 1.56
SLC6A1-203ENST00000460480 ADGRL1O94910 1474 aa24.79■■□□□ 1.56
SLC6A1-203ENST00000460480 SAMD9Q5K651 1589 aa24.79■■□□□ 1.56
SLC6A1-203ENST00000460480 EEA1Q15075 1411 aa24.78■■□□□ 1.56
SLC6A1-203ENST00000460480 FAM9AQ8IZU1 332 aaPredicted RBP24.78■■□□□ 1.56
SLC6A1-203ENST00000460480 ARID3CA6NKF2 412 aa24.77■■□□□ 1.56
SLC6A1-203ENST00000460480 ARAP3Q8WWN8 1544 aa24.69■■□□□ 1.54
SLC6A1-203ENST00000460480 RAPGEF6Q8TEU7 1601 aa24.66■■□□□ 1.54
SLC6A1-203ENST00000460480 NUP153P49790 1475 aaKnown RBP24.65■■□□□ 1.54
SLC6A1-203ENST00000460480 PHLDB1Q86UU1 1377 aa24.65■■□□□ 1.54
SLC6A1-203ENST00000460480 ABCA9Q8IUA7 1624 aa24.64■■□□□ 1.54
SLC6A1-203ENST00000460480 FHOD3Q2V2M9 1422 aa24.62■■□□□ 1.53
SLC6A1-203ENST00000460480 RANGAP1P46060 587 aaPredicted RBP24.62■■□□□ 1.53
SLC6A1-203ENST00000460480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.57■■□□□ 1.52
SLC6A1-203ENST00000460480 HNRNPUL2Q1KMD3 747 aaKnown RBP24.57■■□□□ 1.52
SLC6A1-203ENST00000460480 RAPGEF3O95398 923 aa24.56■■□□□ 1.52
SLC6A1-203ENST00000460480 KIF21BO75037 1637 aa24.56■■□□□ 1.52
SLC6A1-203ENST00000460480 NEO1Q92859 1461 aa24.55■■□□□ 1.52
SLC6A1-203ENST00000460480 PLEKHD1A6NEE1 506 aa24.54■■□□□ 1.52
SLC6A1-203ENST00000460480 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
SLC6A1-203ENST00000460480 EFCAB5A4FU69 1503 aa24.5■■□□□ 1.51
SLC6A1-203ENST00000460480 FRMPD1Q5SYB0 1578 aa24.43■■□□□ 1.5
SLC6A1-203ENST00000460480 HECW2Q9P2P5 1572 aa24.43■■□□□ 1.5
SLC6A1-203ENST00000460480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.41■■□□□ 1.5
SLC6A1-203ENST00000460480 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
SLC6A1-203ENST00000460480 AKNAQ7Z591 1439 aa24.4■■□□□ 1.5
SLC6A1-203ENST00000460480 ADAMTSL3P82987 1691 aa24.37■■□□□ 1.49
SLC6A1-203ENST00000460480 EHMT2Q96KQ7 1210 aa24.37■■□□□ 1.49
SLC6A1-203ENST00000460480 DENND4BO75064 1496 aaPredicted RBP24.37■■□□□ 1.49
SLC6A1-203ENST00000460480 CDK13Q14004 1512 aaKnown RBP24.36■■□□□ 1.49
SLC6A1-203ENST00000460480 FANCAO15360 1455 aa24.36■■□□□ 1.49
SLC6A1-203ENST00000460480 ARHGAP35Q9NRY4 1499 aa24.36■■□□□ 1.49
SLC6A1-203ENST00000460480 ILDR1Q86SU0 546 aaPredicted RBP24.34■■□□□ 1.49
SLC6A1-203ENST00000460480 TTC37Q6PGP7 1564 aa24.33■■□□□ 1.49
SLC6A1-203ENST00000460480 PTPRMP28827 1452 aa24.32■■□□□ 1.48
SLC6A1-203ENST00000460480 FMN1Q68DA7 1419 aa24.32■■□□□ 1.48
SLC6A1-203ENST00000460480 PLCH2O75038 1416 aa24.31■■□□□ 1.48
SLC6A1-203ENST00000460480 RICTORQ6R327 1708 aa24.31■■□□□ 1.48
SLC6A1-203ENST00000460480 BCORL1Q5H9F3 1711 aa24.28■■□□□ 1.48
SLC6A1-203ENST00000460480 ARID4BQ4LE39 1312 aaPredicted RBP24.27■■□□□ 1.48
SLC6A1-203ENST00000460480 CFAP74Q9C0B2 1584 aa24.25■■□□□ 1.47
SLC6A1-203ENST00000460480 ATP1B4Q9UN42 357 aaPredicted RBP24.25■■□□□ 1.47
SLC6A1-203ENST00000460480 ZMYM4Q5VZL5 1548 aa24.25■■□□□ 1.47
SLC6A1-203ENST00000460480 ARHGEF40Q8TER5 1519 aa24.25■■□□□ 1.47
SLC6A1-203ENST00000460480 CDK11AQ9UQ88 783 aaPredicted RBP24.23■■□□□ 1.47
SLC6A1-203ENST00000460480 MAGI2Q86UL8 1455 aa24.22■■□□□ 1.47
SLC6A1-203ENST00000460480 SCAPERQ9BY12 1400 aa24.22■■□□□ 1.47
SLC6A1-203ENST00000460480 YEATS2Q9ULM3 1422 aa24.22■■□□□ 1.47
SLC6A1-203ENST00000460480 EFCAB2Q5VUJ9 269 aa24.21■■□□□ 1.47
SLC6A1-203ENST00000460480 HECW1Q76N89 1606 aa24.21■■□□□ 1.47
SLC6A1-203ENST00000460480 MADDQ8WXG6 1647 aa24.2■■□□□ 1.46
SLC6A1-203ENST00000460480 TROQ12816 1431 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms