RNA–Protein interactions for RNA: ENST00000460207.1

RUNX1-209, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-209ENST00000460207 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
RUNX1-209ENST00000460207 KIAA0586Q9BVV6 1533 aa28.51■■■□□ 2.15
RUNX1-209ENST00000460207 CUL7Q14999 1698 aa28.47■■■□□ 2.15
RUNX1-209ENST00000460207 NPM1P06748 294 aaKnown RBP eCLIP28.44■■■□□ 2.14
RUNX1-209ENST00000460207 CARMIL1Q5VZK9 1371 aa28.41■■■□□ 2.14
RUNX1-209ENST00000460207 KIF13AQ9H1H9 1805 aa28.32■■■□□ 2.12
RUNX1-209ENST00000460207 FAM69CQ0P6D2 419 aa28.3■■■□□ 2.12
RUNX1-209ENST00000460207 MAPKBP1O60336 1514 aa28.29■■■□□ 2.12
RUNX1-209ENST00000460207 ABCC10Q5T3U5 1492 aa28.29■■■□□ 2.12
RUNX1-209ENST00000460207 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
RUNX1-209ENST00000460207 ADCY10Q96PN6 1610 aa28.27■■■□□ 2.12
RUNX1-209ENST00000460207 PTPRGP23470 1445 aa28.26■■■□□ 2.11
RUNX1-209ENST00000460207 CARMIL2Q6F5E8 1435 aa28.24■■■□□ 2.11
RUNX1-209ENST00000460207 TNIKQ9UKE5 1360 aa28.2■■■□□ 2.1
RUNX1-209ENST00000460207 IQGAP2Q13576 1575 aa28.16■■■□□ 2.1
RUNX1-209ENST00000460207 DIP2BQ9P265 1576 aa28.14■■■□□ 2.1
RUNX1-209ENST00000460207 RAPGEF2Q9Y4G8 1499 aa28.13■■■□□ 2.09
RUNX1-209ENST00000460207 TTBK1Q5TCY1 1321 aaPredicted RBP28.08■■■□□ 2.09
RUNX1-209ENST00000460207 ABCC2Q92887 1545 aa28.07■■■□□ 2.08
RUNX1-209ENST00000460207 UHRF1BP1LA0JNW5 1464 aa28.05■■■□□ 2.08
RUNX1-209ENST00000460207 DISP1Q96F81 1524 aa28.05■■■□□ 2.08
RUNX1-209ENST00000460207 UGGT2Q9NYU1 1516 aa28.02■■■□□ 2.08
RUNX1-209ENST00000460207 UACAQ9BZF9 1416 aa28.01■■■□□ 2.08
RUNX1-209ENST00000460207 PLB1Q6P1J6 1458 aa28■■■□□ 2.07
RUNX1-209ENST00000460207 ASXL2Q76L83 1435 aa27.96■■■□□ 2.07
RUNX1-209ENST00000460207 TSPOAP1O95153 1857 aa27.92■■■□□ 2.06
RUNX1-209ENST00000460207 KDM6BO15054 1643 aa27.91■■■□□ 2.06
RUNX1-209ENST00000460207 KDM5BQ9UGL1 1544 aa27.91■■■□□ 2.06
RUNX1-209ENST00000460207 GLI2P10070 1586 aa27.9■■■□□ 2.06
RUNX1-209ENST00000460207 KIAA0556O60303 1618 aa27.87■■■□□ 2.05
RUNX1-209ENST00000460207 PRXQ9BXM0 1461 aa27.83■■■□□ 2.05
RUNX1-209ENST00000460207 GOLGA3Q08378 1498 aa27.83■■■□□ 2.04
RUNX1-209ENST00000460207 CTTNBP2Q8WZ74 1663 aa27.79■■■□□ 2.04
RUNX1-209ENST00000460207 EPRSP07814 1512 aaKnown RBP27.79■■■□□ 2.04
RUNX1-209ENST00000460207 ZCCHC11Q5TAX3 1644 aaKnown RBP27.75■■■□□ 2.03
RUNX1-209ENST00000460207 PPRC1Q5VV67 1664 aaKnown RBP27.75■■■□□ 2.03
RUNX1-209ENST00000460207 KDM4FA0A1W2PPD8 638 aa27.73■■■□□ 2.03
RUNX1-209ENST00000460207 MAP3K4Q9Y6R4 1608 aa27.7■■■□□ 2.02
RUNX1-209ENST00000460207 FAM9AQ8IZU1 332 aaPredicted RBP27.69■■■□□ 2.02
RUNX1-209ENST00000460207 TEX14Q8IWB6 1497 aa27.69■■■□□ 2.02
RUNX1-209ENST00000460207 CSRNP3Q8WYN3 585 aa27.68■■■□□ 2.02
RUNX1-209ENST00000460207 WDR7Q9Y4E6 1490 aa27.68■■■□□ 2.02
RUNX1-209ENST00000460207 ABCA8O94911 1581 aa27.66■■■□□ 2.02
RUNX1-209ENST00000460207 COL17A1Q9UMD9 1497 aaPredicted RBP27.64■■■□□ 2.01
RUNX1-209ENST00000460207 KCNH8Q96L42 1107 aa27.58■■■□□ 2.01
RUNX1-209ENST00000460207 CD109Q6YHK3 1445 aa27.56■■■□□ 2
RUNX1-209ENST00000460207 EEA1Q15075 1411 aa27.54■■■□□ 2
RUNX1-209ENST00000460207 MAGI3Q5TCQ9 1506 aa27.54■■■□□ 2
RUNX1-209ENST00000460207 P3H3Q8IVL6 736 aa27.53■■■□□ 2
RUNX1-209ENST00000460207 CFAP43Q8NDM7 1665 aa27.49■■□□□ 1.99
RUNX1-209ENST00000460207 ATP10BO94823 1461 aa27.48■■□□□ 1.99
RUNX1-209ENST00000460207 SAMD9Q5K651 1589 aa27.43■■□□□ 1.98
RUNX1-209ENST00000460207 ADGRL1O94910 1474 aa27.43■■□□□ 1.98
RUNX1-209ENST00000460207 ARID3CA6NKF2 412 aa27.4■■□□□ 1.98
RUNX1-209ENST00000460207 PHLDB1Q86UU1 1377 aa27.36■■□□□ 1.97
RUNX1-209ENST00000460207 ARAP3Q8WWN8 1544 aa27.34■■□□□ 1.97
RUNX1-209ENST00000460207 RAPGEF6Q8TEU7 1601 aa27.33■■□□□ 1.97
RUNX1-209ENST00000460207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.3■■□□□ 1.96
RUNX1-209ENST00000460207 HNRNPUL2Q1KMD3 747 aaKnown RBP27.3■■□□□ 1.96
RUNX1-209ENST00000460207 ABCA9Q8IUA7 1624 aa27.3■■□□□ 1.96
RUNX1-209ENST00000460207 RANGAP1P46060 587 aaPredicted RBP27.27■■□□□ 1.96
RUNX1-209ENST00000460207 NUP153P49790 1475 aaKnown RBP27.26■■□□□ 1.95
RUNX1-209ENST00000460207 FHOD3Q2V2M9 1422 aa27.24■■□□□ 1.95
RUNX1-209ENST00000460207 PLEKHD1A6NEE1 506 aa27.23■■□□□ 1.95
RUNX1-209ENST00000460207 KIF21BO75037 1637 aa27.23■■□□□ 1.95
RUNX1-209ENST00000460207 NEO1Q92859 1461 aa27.22■■□□□ 1.95
RUNX1-209ENST00000460207 EFCAB5A4FU69 1503 aa27.2■■□□□ 1.94
RUNX1-209ENST00000460207 RAPGEF3O95398 923 aa27.16■■□□□ 1.94
RUNX1-209ENST00000460207 UBTFP17480 764 aaKnown RBP27.11■■□□□ 1.93
RUNX1-209ENST00000460207 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
RUNX1-209ENST00000460207 HECW2Q9P2P5 1572 aa27.03■■□□□ 1.92
RUNX1-209ENST00000460207 AKNAQ7Z591 1439 aa27.02■■□□□ 1.92
RUNX1-209ENST00000460207 FMN1Q68DA7 1419 aa27.01■■□□□ 1.91
RUNX1-209ENST00000460207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27■■□□□ 1.91
RUNX1-209ENST00000460207 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
RUNX1-209ENST00000460207 FANCAO15360 1455 aa27■■□□□ 1.91
RUNX1-209ENST00000460207 FRMPD1Q5SYB0 1578 aa26.98■■□□□ 1.91
RUNX1-209ENST00000460207 EHMT2Q96KQ7 1210 aa26.96■■□□□ 1.91
RUNX1-209ENST00000460207 CDK11AQ9UQ88 783 aaPredicted RBP26.96■■□□□ 1.91
RUNX1-209ENST00000460207 CFAP74Q9C0B2 1584 aa26.96■■□□□ 1.91
RUNX1-209ENST00000460207 ADAMTSL3P82987 1691 aa26.95■■□□□ 1.91
RUNX1-209ENST00000460207 ARHGAP35Q9NRY4 1499 aa26.94■■□□□ 1.9
RUNX1-209ENST00000460207 CDK13Q14004 1512 aaKnown RBP26.94■■□□□ 1.9
RUNX1-209ENST00000460207 ARID4BQ4LE39 1312 aaPredicted RBP26.93■■□□□ 1.9
RUNX1-209ENST00000460207 ATP1B4Q9UN42 357 aaPredicted RBP26.92■■□□□ 1.9
RUNX1-209ENST00000460207 PTPRMP28827 1452 aa26.92■■□□□ 1.9
RUNX1-209ENST00000460207 PLCH2O75038 1416 aa26.91■■□□□ 1.9
RUNX1-209ENST00000460207 RICTORQ6R327 1708 aa26.91■■□□□ 1.9
RUNX1-209ENST00000460207 TTC37Q6PGP7 1564 aa26.91■■□□□ 1.9
RUNX1-209ENST00000460207 ILDR1Q86SU0 546 aaPredicted RBP26.88■■□□□ 1.89
RUNX1-209ENST00000460207 HECW1Q76N89 1606 aa26.87■■□□□ 1.89
RUNX1-209ENST00000460207 BCORL1Q5H9F3 1711 aa26.87■■□□□ 1.89
RUNX1-209ENST00000460207 MAGI2Q86UL8 1455 aa26.87■■□□□ 1.89
RUNX1-209ENST00000460207 ARHGEF40Q8TER5 1519 aa26.86■■□□□ 1.89
RUNX1-209ENST00000460207 EFCAB2Q5VUJ9 269 aa26.86■■□□□ 1.89
RUNX1-209ENST00000460207 ZMYM4Q5VZL5 1548 aa26.85■■□□□ 1.89
RUNX1-209ENST00000460207 SCAPERQ9BY12 1400 aa26.83■■□□□ 1.89
RUNX1-209ENST00000460207 POGZQ7Z3K3 1410 aa26.81■■□□□ 1.88
RUNX1-209ENST00000460207 TROQ12816 1431 aaPredicted RBP26.79■■□□□ 1.88
RUNX1-209ENST00000460207 ZFYVE16Q7Z3T8 1539 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms