RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 IGF1RP08069 1367 aa39.65■■■■□ 3.94
PTPN4-207ENST00000460162 JPH4Q96JJ6 628 aa39.58■■■■□ 3.93
PTPN4-207ENST00000460162 KIAA0586Q9BVV6 1533 aa39.54■■■■□ 3.92
PTPN4-207ENST00000460162 CARMIL1Q5VZK9 1371 aa39.42■■■■□ 3.9
PTPN4-207ENST00000460162 KIF13AQ9H1H9 1805 aa39.26■■■■□ 3.88
PTPN4-207ENST00000460162 ADCY10Q96PN6 1610 aa39.26■■■■□ 3.88
PTPN4-207ENST00000460162 IQGAP2Q13576 1575 aa39.25■■■■□ 3.87
PTPN4-207ENST00000460162 MAPKBP1O60336 1514 aa39.2■■■■□ 3.87
PTPN4-207ENST00000460162 RAPGEF2Q9Y4G8 1499 aa39.15■■■■□ 3.86
PTPN4-207ENST00000460162 CARMIL2Q6F5E8 1435 aa39.13■■■■□ 3.85
PTPN4-207ENST00000460162 NPM1P06748 294 aaKnown RBP eCLIP39.09■■■■□ 3.85
PTPN4-207ENST00000460162 ABCC10Q5T3U5 1492 aa39.07■■■■□ 3.85
PTPN4-207ENST00000460162 PTPRGP23470 1445 aa39.06■■■■□ 3.84
PTPN4-207ENST00000460162 TNIKQ9UKE5 1360 aa39.05■■■■□ 3.84
PTPN4-207ENST00000460162 DIP2BQ9P265 1576 aa39.04■■■■□ 3.84
PTPN4-207ENST00000460162 UGGT2Q9NYU1 1516 aa38.99■■■■□ 3.83
PTPN4-207ENST00000460162 DISP1Q96F81 1524 aa38.99■■■■□ 3.83
PTPN4-207ENST00000460162 CTTNBP2Q8WZ74 1663 aa38.96■■■■□ 3.83
PTPN4-207ENST00000460162 ABCC2Q92887 1545 aa38.91■■■■□ 3.82
PTPN4-207ENST00000460162 KIAA0556O60303 1618 aa38.9■■■■□ 3.82
PTPN4-207ENST00000460162 FAM69CQ0P6D2 419 aa38.89■■■■□ 3.82
PTPN4-207ENST00000460162 UHRF1BP1LA0JNW5 1464 aa38.87■■■■□ 3.81
PTPN4-207ENST00000460162 TTBK1Q5TCY1 1321 aaPredicted RBP38.83■■■■□ 3.81
PTPN4-207ENST00000460162 PRXQ9BXM0 1461 aa38.82■■■■□ 3.81
PTPN4-207ENST00000460162 UACAQ9BZF9 1416 aa38.8■■■■□ 3.8
PTPN4-207ENST00000460162 PLB1Q6P1J6 1458 aa38.72■■■■□ 3.79
PTPN4-207ENST00000460162 ASXL2Q76L83 1435 aa38.7■■■■□ 3.79
PTPN4-207ENST00000460162 GOLGA3Q08378 1498 aa38.69■■■■□ 3.78
PTPN4-207ENST00000460162 TSPOAP1O95153 1857 aa38.69■■■■□ 3.78
PTPN4-207ENST00000460162 KDM5BQ9UGL1 1544 aa38.68■■■■□ 3.78
PTPN4-207ENST00000460162 GLI2P10070 1586 aa38.65■■■■□ 3.78
PTPN4-207ENST00000460162 ZCCHC11Q5TAX3 1644 aaKnown RBP38.63■■■■□ 3.78
PTPN4-207ENST00000460162 KDM6BO15054 1643 aa38.63■■■■□ 3.77
PTPN4-207ENST00000460162 PPRC1Q5VV67 1664 aaKnown RBP38.52■■■■□ 3.76
PTPN4-207ENST00000460162 AEBP2Q6ZN18 517 aaPredicted RBP38.51■■■■□ 3.76
PTPN4-207ENST00000460162 EEA1Q15075 1411 aa38.51■■■■□ 3.76
PTPN4-207ENST00000460162 ABCA8O94911 1581 aa38.5■■■■□ 3.75
PTPN4-207ENST00000460162 EPRSP07814 1512 aaKnown RBP38.49■■■■□ 3.75
PTPN4-207ENST00000460162 MAP3K4Q9Y6R4 1608 aa38.47■■■■□ 3.75
PTPN4-207ENST00000460162 CSRNP3Q8WYN3 585 aa38.45■■■■□ 3.75
PTPN4-207ENST00000460162 WDR7Q9Y4E6 1490 aa38.41■■■■□ 3.74
PTPN4-207ENST00000460162 SAMD9Q5K651 1589 aa38.37■■■■□ 3.73
PTPN4-207ENST00000460162 TEX14Q8IWB6 1497 aa38.31■■■■□ 3.72
PTPN4-207ENST00000460162 CFAP43Q8NDM7 1665 aa38.24■■■■□ 3.71
PTPN4-207ENST00000460162 KIF21BO75037 1637 aa38.23■■■■□ 3.71
PTPN4-207ENST00000460162 FAM9AQ8IZU1 332 aaPredicted RBP38.21■■■■□ 3.71
PTPN4-207ENST00000460162 RAPGEF6Q8TEU7 1601 aa38.16■■■■□ 3.7
PTPN4-207ENST00000460162 P3H3Q8IVL6 736 aa38.15■■■■□ 3.7
PTPN4-207ENST00000460162 MAGI3Q5TCQ9 1506 aa38.12■■■■□ 3.69
PTPN4-207ENST00000460162 COL17A1Q9UMD9 1497 aaPredicted RBP38.11■■■■□ 3.69
PTPN4-207ENST00000460162 ATP10BO94823 1461 aa38.09■■■■□ 3.69
PTPN4-207ENST00000460162 CD109Q6YHK3 1445 aa38.08■■■■□ 3.69
PTPN4-207ENST00000460162 EFCAB5A4FU69 1503 aa38.05■■■■□ 3.68
PTPN4-207ENST00000460162 KCNH8Q96L42 1107 aa38.01■■■■□ 3.68
PTPN4-207ENST00000460162 FHOD3Q2V2M9 1422 aa38■■■■□ 3.67
PTPN4-207ENST00000460162 ABCA9Q8IUA7 1624 aa37.98■■■■□ 3.67
PTPN4-207ENST00000460162 ARID3CA6NKF2 412 aa37.97■■■■□ 3.67
PTPN4-207ENST00000460162 NUP153P49790 1475 aaKnown RBP37.96■■■■□ 3.67
PTPN4-207ENST00000460162 KDM4FA0A1W2PPD8 638 aa37.94■■■■□ 3.66
PTPN4-207ENST00000460162 CHIC1Q5VXU3 224 aa37.91■■■■□ 3.66
PTPN4-207ENST00000460162 RANGAP1P46060 587 aaPredicted RBP37.9■■■■□ 3.66
PTPN4-207ENST00000460162 ADGRL1O94910 1474 aa37.84■■■■□ 3.65
PTPN4-207ENST00000460162 ARAP3Q8WWN8 1544 aa37.81■■■■□ 3.64
PTPN4-207ENST00000460162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.77■■■■□ 3.64
PTPN4-207ENST00000460162 HNRNPUL2Q1KMD3 747 aaKnown RBP37.77■■■■□ 3.64
PTPN4-207ENST00000460162 PHLDB1Q86UU1 1377 aa37.74■■■■□ 3.63
PTPN4-207ENST00000460162 NEO1Q92859 1461 aa37.71■■■■□ 3.63
PTPN4-207ENST00000460162 UBTFP17480 764 aaKnown RBP37.69■■■■□ 3.62
PTPN4-207ENST00000460162 ARHGAP35Q9NRY4 1499 aa37.64■■■■□ 3.62
PTPN4-207ENST00000460162 FMN1Q68DA7 1419 aa37.64■■■■□ 3.62
PTPN4-207ENST00000460162 HECW1Q76N89 1606 aa37.63■■■■□ 3.61
PTPN4-207ENST00000460162 PLEKHD1A6NEE1 506 aa37.62■■■■□ 3.61
PTPN4-207ENST00000460162 CDK13Q14004 1512 aaKnown RBP37.61■■■■□ 3.61
PTPN4-207ENST00000460162 EHMT2Q96KQ7 1210 aa37.6■■■■□ 3.61
PTPN4-207ENST00000460162 CFAP74Q9C0B2 1584 aa37.59■■■■□ 3.61
PTPN4-207ENST00000460162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.58■■■■□ 3.61
PTPN4-207ENST00000460162 TTC37Q6PGP7 1564 aa37.56■■■■□ 3.6
PTPN4-207ENST00000460162 FRMPD1Q5SYB0 1578 aa37.55■■■■□ 3.6
PTPN4-207ENST00000460162 FANCAO15360 1455 aa37.47■■■■□ 3.59
PTPN4-207ENST00000460162 RICTORQ6R327 1708 aa37.45■■■■□ 3.59
PTPN4-207ENST00000460162 RAPGEF3O95398 923 aa37.43■■■■□ 3.58
PTPN4-207ENST00000460162 AKNAQ7Z591 1439 aa37.41■■■■□ 3.58
PTPN4-207ENST00000460162 DENND4BO75064 1496 aaPredicted RBP37.4■■■■□ 3.58
PTPN4-207ENST00000460162 ARHGEF40Q8TER5 1519 aa37.39■■■■□ 3.58
PTPN4-207ENST00000460162 LRRIQ1Q96JM4 1722 aa37.37■■■■□ 3.57
PTPN4-207ENST00000460162 MYO5CQ9NQX4 1742 aa37.35■■■■□ 3.57
PTPN4-207ENST00000460162 KIF14Q15058 1648 aa37.35■■■■□ 3.57
PTPN4-207ENST00000460162 ZMYM4Q5VZL5 1548 aa37.33■■■■□ 3.57
PTPN4-207ENST00000460162 ATP1B4Q9UN42 357 aaPredicted RBP37.33■■■■□ 3.57
PTPN4-207ENST00000460162 PLCH2O75038 1416 aa37.31■■■■□ 3.56
PTPN4-207ENST00000460162 CDK11AQ9UQ88 783 aaPredicted RBP37.31■■■■□ 3.56
PTPN4-207ENST00000460162 ADAMTSL3P82987 1691 aa37.31■■■■□ 3.56
PTPN4-207ENST00000460162 PCF11O94913 1555 aaKnown RBP37.3■■■■□ 3.56
PTPN4-207ENST00000460162 TROQ12816 1431 aaPredicted RBP37.28■■■■□ 3.56
PTPN4-207ENST00000460162 HECW2Q9P2P5 1572 aa37.28■■■■□ 3.56
PTPN4-207ENST00000460162 BCORL1Q5H9F3 1711 aa37.27■■■■□ 3.56
PTPN4-207ENST00000460162 CLIP1P30622 1438 aa37.25■■■■□ 3.55
PTPN4-207ENST00000460162 CASKIN1Q8WXD9 1431 aa37.24■■■■□ 3.55
PTPN4-207ENST00000460162 CCDC18Q5T9S5 1454 aa37.24■■■■□ 3.55
PTPN4-207ENST00000460162 ZFYVE16Q7Z3T8 1539 aa37.2■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms