RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 RIMBP3Q9UFD9 1639 aa15.4■□□□□ 0.06
PCCB-202ENST00000459873 ARHGEF11O15085 1522 aa15.39■□□□□ 0.05
PCCB-202ENST00000459873 IQGAP2Q13576 1575 aa15.38■□□□□ 0.05
PCCB-202ENST00000459873 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
PCCB-202ENST00000459873 KIAA0586Q9BVV6 1533 aa15.36■□□□□ 0.05
PCCB-202ENST00000459873 ERCC6L2Q5T890 1561 aa15.32■□□□□ 0.04
PCCB-202ENST00000459873 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
PCCB-202ENST00000459873 UGGT2Q9NYU1 1516 aa15.29■□□□□ 0.04
PCCB-202ENST00000459873 GOLGA3Q08378 1498 aa15.29■□□□□ 0.04
PCCB-202ENST00000459873 ARAP1Q96P48 1450 aa15.28■□□□□ 0.04
PCCB-202ENST00000459873 KIAA0556O60303 1618 aa15.26■□□□□ 0.03
PCCB-202ENST00000459873 FAM9AQ8IZU1 332 aaPredicted RBP15.25■□□□□ 0.03
PCCB-202ENST00000459873 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
PCCB-202ENST00000459873 PRG4Q92954 1404 aaPredicted RBP15.23■□□□□ 0.03
PCCB-202ENST00000459873 DISP1Q96F81 1524 aa15.22■□□□□ 0.03
PCCB-202ENST00000459873 EFCAB5A4FU69 1503 aa15.17■□□□□ 0.02
PCCB-202ENST00000459873 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
PCCB-202ENST00000459873 CARMIL2Q6F5E8 1435 aa15.14■□□□□ 0.01
PCCB-202ENST00000459873 ADCY10Q96PN6 1610 aa15.11■□□□□ 0.01
PCCB-202ENST00000459873 TNIKQ9UKE5 1360 aa15.09■□□□□ 0.01
PCCB-202ENST00000459873 ABCA8O94911 1581 aa15.06■□□□□ 0
PCCB-202ENST00000459873 ARHGAP35Q9NRY4 1499 aa15.05■□□□□ -0
PCCB-202ENST00000459873 ABCC2Q92887 1545 aa15.05■□□□□ -0
PCCB-202ENST00000459873 FHOD3Q2V2M9 1422 aa15.03■□□□□ -0
PCCB-202ENST00000459873 UHRF1BP1LA0JNW5 1464 aa15.02■□□□□ -0
PCCB-202ENST00000459873 PTPRGP23470 1445 aa15.02■□□□□ -0
PCCB-202ENST00000459873 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
PCCB-202ENST00000459873 RAPGEF6Q8TEU7 1601 aa15.01□□□□□ -0.01
PCCB-202ENST00000459873 UBTFP17480 764 aaKnown RBP15□□□□□ -0.01
PCCB-202ENST00000459873 CYB5RLQ6IPT4 315 aa15□□□□□ -0.01
PCCB-202ENST00000459873 PLB1Q6P1J6 1458 aa15□□□□□ -0.01
PCCB-202ENST00000459873 ZCCHC11Q5TAX3 1644 aaKnown RBP14.99□□□□□ -0.01
PCCB-202ENST00000459873 CEP162Q5TB80 1403 aa14.98□□□□□ -0.01
PCCB-202ENST00000459873 UACAQ9BZF9 1416 aa14.98□□□□□ -0.01
PCCB-202ENST00000459873 MAPKBP1O60336 1514 aa14.97□□□□□ -0.01
PCCB-202ENST00000459873 PCF11O94913 1555 aaKnown RBP14.97□□□□□ -0.01
PCCB-202ENST00000459873 CLIP1P30622 1438 aa14.96□□□□□ -0.01
PCCB-202ENST00000459873 KDM5BQ9UGL1 1544 aa14.95□□□□□ -0.02
PCCB-202ENST00000459873 HECW1Q76N89 1606 aa14.95□□□□□ -0.02
PCCB-202ENST00000459873 LRRIQ1Q96JM4 1722 aa14.93□□□□□ -0.02
PCCB-202ENST00000459873 NUP153P49790 1475 aaKnown RBP14.92□□□□□ -0.02
PCCB-202ENST00000459873 FMN1Q68DA7 1419 aa14.92□□□□□ -0.02
PCCB-202ENST00000459873 DIP2BQ9P265 1576 aa14.9□□□□□ -0.02
PCCB-202ENST00000459873 KIF13AQ9H1H9 1805 aa14.89□□□□□ -0.03
PCCB-202ENST00000459873 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
PCCB-202ENST00000459873 P3H3Q8IVL6 736 aa14.89□□□□□ -0.03
PCCB-202ENST00000459873 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
PCCB-202ENST00000459873 TTBK1Q5TCY1 1321 aaPredicted RBP14.88□□□□□ -0.03
PCCB-202ENST00000459873 LOC105371045A0A1W2PR82 267 aa14.85□□□□□ -0.03
PCCB-202ENST00000459873 CDK13Q14004 1512 aaKnown RBP14.84□□□□□ -0.03
PCCB-202ENST00000459873 CASKIN1Q8WXD9 1431 aa14.83□□□□□ -0.03
PCCB-202ENST00000459873 CFAP43Q8NDM7 1665 aa14.83□□□□□ -0.04
PCCB-202ENST00000459873 ASXL2Q76L83 1435 aa14.83□□□□□ -0.04
PCCB-202ENST00000459873 ATP10BO94823 1461 aa14.82□□□□□ -0.04
PCCB-202ENST00000459873 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
PCCB-202ENST00000459873 EPRSP07814 1512 aaKnown RBP14.82□□□□□ -0.04
PCCB-202ENST00000459873 ABCC10Q5T3U5 1492 aa14.81□□□□□ -0.04
PCCB-202ENST00000459873 CCDC18Q5T9S5 1454 aa14.81□□□□□ -0.04
PCCB-202ENST00000459873 GLI2P10070 1586 aa14.8□□□□□ -0.04
PCCB-202ENST00000459873 VPS8Q8N3P4 1428 aa14.79□□□□□ -0.04
PCCB-202ENST00000459873 MAP3K4Q9Y6R4 1608 aa14.78□□□□□ -0.04
PCCB-202ENST00000459873 PPRC1Q5VV67 1664 aaKnown RBP14.76□□□□□ -0.05
PCCB-202ENST00000459873 ABCA9Q8IUA7 1624 aa14.75□□□□□ -0.05
PCCB-202ENST00000459873 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCCB-202ENST00000459873 MAGI3Q5TCQ9 1506 aa14.74□□□□□ -0.05
PCCB-202ENST00000459873 KIF14Q15058 1648 aa14.73□□□□□ -0.05
PCCB-202ENST00000459873 TIAM1Q13009 1591 aa14.73□□□□□ -0.05
PCCB-202ENST00000459873 TTC37Q6PGP7 1564 aa14.73□□□□□ -0.05
PCCB-202ENST00000459873 EHBP1L1Q8N3D4 1523 aa14.7□□□□□ -0.06
PCCB-202ENST00000459873 ARID3CA6NKF2 412 aa14.69□□□□□ -0.06
PCCB-202ENST00000459873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.68□□□□□ -0.06
PCCB-202ENST00000459873 TSPOAP1O95153 1857 aa14.67□□□□□ -0.06
PCCB-202ENST00000459873 TROQ12816 1431 aaPredicted RBP14.67□□□□□ -0.06
PCCB-202ENST00000459873 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
PCCB-202ENST00000459873 MYO5CQ9NQX4 1742 aa14.66□□□□□ -0.06
PCCB-202ENST00000459873 PREX2Q70Z35 1606 aa14.64□□□□□ -0.07
PCCB-202ENST00000459873 CFAP74Q9C0B2 1584 aa14.63□□□□□ -0.07
PCCB-202ENST00000459873 ARAP3Q8WWN8 1544 aa14.61□□□□□ -0.07
PCCB-202ENST00000459873 CDC42BPAQ5VT25 1732 aa14.61□□□□□ -0.07
PCCB-202ENST00000459873 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
PCCB-202ENST00000459873 SUPT6HQ7KZ85 1726 aaKnown RBP14.61□□□□□ -0.07
PCCB-202ENST00000459873 FAM69CQ0P6D2 419 aa14.6□□□□□ -0.07
PCCB-202ENST00000459873 ATP1B4Q9UN42 357 aaPredicted RBP14.6□□□□□ -0.07
PCCB-202ENST00000459873 TEX14Q8IWB6 1497 aa14.6□□□□□ -0.07
PCCB-202ENST00000459873 ITSN2Q9NZM3 1697 aa14.59□□□□□ -0.07
PCCB-202ENST00000459873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.59□□□□□ -0.07
PCCB-202ENST00000459873 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
PCCB-202ENST00000459873 CDC42BPBQ9Y5S2 1711 aa14.58□□□□□ -0.07
PCCB-202ENST00000459873 LRRC9Q6ZRR7 1453 aa14.58□□□□□ -0.08
PCCB-202ENST00000459873 CD109Q6YHK3 1445 aa14.58□□□□□ -0.08
PCCB-202ENST00000459873 KDM6BO15054 1643 aa14.56□□□□□ -0.08
PCCB-202ENST00000459873 PLEKHD1A6NEE1 506 aa14.56□□□□□ -0.08
PCCB-202ENST00000459873 CDK11AQ9UQ88 783 aaPredicted RBP14.55□□□□□ -0.08
PCCB-202ENST00000459873 MTUS2Q5JR59 1369 aa14.55□□□□□ -0.08
PCCB-202ENST00000459873 NEO1Q92859 1461 aa14.54□□□□□ -0.08
PCCB-202ENST00000459873 FRMPD1Q5SYB0 1578 aa14.53□□□□□ -0.08
PCCB-202ENST00000459873 FANCAO15360 1455 aa14.52□□□□□ -0.08
PCCB-202ENST00000459873 NCOA2Q15596 1464 aa14.52□□□□□ -0.08
PCCB-202ENST00000459873 KCNH8Q96L42 1107 aa14.52□□□□□ -0.09
PCCB-202ENST00000459873 ABCC1P33527 1531 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms