RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
HDLBP-228ENST00000459788 PRG4Q92954 1404 aaPredicted RBP17.24■□□□□ 0.35
HDLBP-228ENST00000459788 CARMIL1Q5VZK9 1371 aa17.22■□□□□ 0.35
HDLBP-228ENST00000459788 TRHP20396 242 aaPredicted RBP17.2■□□□□ 0.34
HDLBP-228ENST00000459788 IQGAP2Q13576 1575 aa17.13■□□□□ 0.33
HDLBP-228ENST00000459788 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
HDLBP-228ENST00000459788 CARMIL2Q6F5E8 1435 aa17.09■□□□□ 0.33
HDLBP-228ENST00000459788 KIF13AQ9H1H9 1805 aa17.07■□□□□ 0.32
HDLBP-228ENST00000459788 MAPKBP1O60336 1514 aa17.06■□□□□ 0.32
HDLBP-228ENST00000459788 ADCY10Q96PN6 1610 aa17.06■□□□□ 0.32
HDLBP-228ENST00000459788 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
HDLBP-228ENST00000459788 UGGT2Q9NYU1 1516 aa17.04■□□□□ 0.32
HDLBP-228ENST00000459788 TNIKQ9UKE5 1360 aa17.03■□□□□ 0.32
HDLBP-228ENST00000459788 NPM1P06748 294 aaKnown RBP eCLIP17.03■□□□□ 0.32
HDLBP-228ENST00000459788 PTPRGP23470 1445 aa17.02■□□□□ 0.31
HDLBP-228ENST00000459788 PRXQ9BXM0 1461 aa17■□□□□ 0.31
HDLBP-228ENST00000459788 DISP1Q96F81 1524 aa16.99■□□□□ 0.31
HDLBP-228ENST00000459788 UHRF1BP1LA0JNW5 1464 aa16.99■□□□□ 0.31
HDLBP-228ENST00000459788 ABCC10Q5T3U5 1492 aa16.98■□□□□ 0.31
HDLBP-228ENST00000459788 KIAA0556O60303 1618 aa16.96■□□□□ 0.3
HDLBP-228ENST00000459788 EEA1Q15075 1411 aa16.96■□□□□ 0.3
HDLBP-228ENST00000459788 ABCC2Q92887 1545 aa16.95■□□□□ 0.3
HDLBP-228ENST00000459788 DIP2BQ9P265 1576 aa16.94■□□□□ 0.3
HDLBP-228ENST00000459788 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
HDLBP-228ENST00000459788 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
HDLBP-228ENST00000459788 PLB1Q6P1J6 1458 aa16.88■□□□□ 0.29
HDLBP-228ENST00000459788 KDM5BQ9UGL1 1544 aa16.87■□□□□ 0.29
HDLBP-228ENST00000459788 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
HDLBP-228ENST00000459788 GLI2P10070 1586 aa16.86■□□□□ 0.29
HDLBP-228ENST00000459788 FAM69CQ0P6D2 419 aa16.86■□□□□ 0.29
HDLBP-228ENST00000459788 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
HDLBP-228ENST00000459788 ASXL2Q76L83 1435 aa16.81■□□□□ 0.28
HDLBP-228ENST00000459788 ABCA8O94911 1581 aa16.8■□□□□ 0.28
HDLBP-228ENST00000459788 TSPOAP1O95153 1857 aa16.8■□□□□ 0.28
HDLBP-228ENST00000459788 FAM9AQ8IZU1 332 aaPredicted RBP16.79■□□□□ 0.28
HDLBP-228ENST00000459788 KIF21BO75037 1637 aa16.78■□□□□ 0.28
HDLBP-228ENST00000459788 SAMD9Q5K651 1589 aa16.78■□□□□ 0.28
HDLBP-228ENST00000459788 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
HDLBP-228ENST00000459788 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
HDLBP-228ENST00000459788 MAP3K4Q9Y6R4 1608 aa16.74■□□□□ 0.27
HDLBP-228ENST00000459788 PPRC1Q5VV67 1664 aaKnown RBP16.74■□□□□ 0.27
HDLBP-228ENST00000459788 KDM6BO15054 1643 aa16.74■□□□□ 0.27
HDLBP-228ENST00000459788 WDR7Q9Y4E6 1490 aa16.72■□□□□ 0.27
HDLBP-228ENST00000459788 CFAP43Q8NDM7 1665 aa16.69■□□□□ 0.26
HDLBP-228ENST00000459788 TEX14Q8IWB6 1497 aa16.69■□□□□ 0.26
HDLBP-228ENST00000459788 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
HDLBP-228ENST00000459788 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
HDLBP-228ENST00000459788 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
HDLBP-228ENST00000459788 MAGI3Q5TCQ9 1506 aa16.62■□□□□ 0.25
HDLBP-228ENST00000459788 ATP10BO94823 1461 aa16.61■□□□□ 0.25
HDLBP-228ENST00000459788 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
HDLBP-228ENST00000459788 ABCA9Q8IUA7 1624 aa16.57■□□□□ 0.24
HDLBP-228ENST00000459788 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
HDLBP-228ENST00000459788 P3H3Q8IVL6 736 aa16.56■□□□□ 0.24
HDLBP-228ENST00000459788 NUP153P49790 1475 aaKnown RBP16.54■□□□□ 0.24
HDLBP-228ENST00000459788 PHLDB1Q86UU1 1377 aa16.54■□□□□ 0.24
HDLBP-228ENST00000459788 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
HDLBP-228ENST00000459788 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
HDLBP-228ENST00000459788 COL17A1Q9UMD9 1497 aaPredicted RBP16.5■□□□□ 0.23
HDLBP-228ENST00000459788 FMN1Q68DA7 1419 aa16.5■□□□□ 0.23
HDLBP-228ENST00000459788 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
HDLBP-228ENST00000459788 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
HDLBP-228ENST00000459788 NEO1Q92859 1461 aa16.47■□□□□ 0.23
HDLBP-228ENST00000459788 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
HDLBP-228ENST00000459788 PLEKHD1A6NEE1 506 aa16.45■□□□□ 0.22
HDLBP-228ENST00000459788 ARHGAP35Q9NRY4 1499 aa16.45■□□□□ 0.22
HDLBP-228ENST00000459788 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
HDLBP-228ENST00000459788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-228ENST00000459788 RANGAP1P46060 587 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-228ENST00000459788 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
HDLBP-228ENST00000459788 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
HDLBP-228ENST00000459788 KDM4FA0A1W2PPD8 638 aa16.39■□□□□ 0.21
HDLBP-228ENST00000459788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.37■□□□□ 0.21
HDLBP-228ENST00000459788 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
HDLBP-228ENST00000459788 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
HDLBP-228ENST00000459788 CDK13Q14004 1512 aaKnown RBP16.35■□□□□ 0.21
HDLBP-228ENST00000459788 TTC37Q6PGP7 1564 aa16.34■□□□□ 0.21
HDLBP-228ENST00000459788 RICTORQ6R327 1708 aa16.33■□□□□ 0.2
HDLBP-228ENST00000459788 LRRIQ1Q96JM4 1722 aa16.33■□□□□ 0.2
HDLBP-228ENST00000459788 MYO5CQ9NQX4 1742 aa16.33■□□□□ 0.2
HDLBP-228ENST00000459788 FANCAO15360 1455 aa16.32■□□□□ 0.2
HDLBP-228ENST00000459788 CCDC18Q5T9S5 1454 aa16.32■□□□□ 0.2
HDLBP-228ENST00000459788 CASKIN1Q8WXD9 1431 aa16.32■□□□□ 0.2
HDLBP-228ENST00000459788 KIF14Q15058 1648 aa16.3■□□□□ 0.2
HDLBP-228ENST00000459788 FRMPD1Q5SYB0 1578 aa16.3■□□□□ 0.2
HDLBP-228ENST00000459788 AKNAQ7Z591 1439 aa16.3■□□□□ 0.2
HDLBP-228ENST00000459788 PLCH2O75038 1416 aa16.29■□□□□ 0.2
HDLBP-228ENST00000459788 TROQ12816 1431 aaPredicted RBP16.29■□□□□ 0.2
HDLBP-228ENST00000459788 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
HDLBP-228ENST00000459788 CLIP1P30622 1438 aa16.28■□□□□ 0.2
HDLBP-228ENST00000459788 ZMYM4Q5VZL5 1548 aa16.28■□□□□ 0.2
HDLBP-228ENST00000459788 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
HDLBP-228ENST00000459788 PCF11O94913 1555 aaKnown RBP16.27■□□□□ 0.2
HDLBP-228ENST00000459788 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
HDLBP-228ENST00000459788 MAGI2Q86UL8 1455 aa16.26■□□□□ 0.19
HDLBP-228ENST00000459788 ARHGEF40Q8TER5 1519 aa16.24■□□□□ 0.19
HDLBP-228ENST00000459788 RAPGEF3O95398 923 aa16.23■□□□□ 0.19
HDLBP-228ENST00000459788 ATP1B4Q9UN42 357 aaPredicted RBP16.23■□□□□ 0.19
HDLBP-228ENST00000459788 ADAMTSL3P82987 1691 aa16.22■□□□□ 0.19
HDLBP-228ENST00000459788 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms