RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
TRAPPC10-204ENST00000459741 NPM1P06748 294 aaKnown RBP eCLIP15.16■□□□□ 0.02
TRAPPC10-204ENST00000459741 MTUS2Q5JR59 1369 aa15.14■□□□□ 0.01
TRAPPC10-204ENST00000459741 BECN1Q14457 450 aa15.13■□□□□ 0.01
TRAPPC10-204ENST00000459741 NOP58Q9Y2X3 529 aaKnown RBP15.13■□□□□ 0.01
TRAPPC10-204ENST00000459741 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
TRAPPC10-204ENST00000459741 WDR43Q15061 677 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRAPPC10-204ENST00000459741 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC10-204ENST00000459741 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
TRAPPC10-204ENST00000459741 SALL2Q9Y467 1007 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC10-204ENST00000459741 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
TRAPPC10-204ENST00000459741 ERICH6BQ5W0A0 696 aa15.08■□□□□ 0.01
TRAPPC10-204ENST00000459741 CHIC2Q9UKJ5 165 aa15.08■□□□□ 0
TRAPPC10-204ENST00000459741 WRNQ14191 1432 aaPredicted RBP eCLIP15.07■□□□□ 0
TRAPPC10-204ENST00000459741 A0A0G2JS52 829 aa15.07■□□□□ 0
TRAPPC10-204ENST00000459741 RBM19Q9Y4C8 960 aaKnown RBP15.05■□□□□ 0
TRAPPC10-204ENST00000459741 TRIM44Q96DX7 344 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC10-204ENST00000459741 DEKP35659 375 aaKnown RBP14.98□□□□□ -0.01
TRAPPC10-204ENST00000459741 ARXQ96QS3 562 aa14.98□□□□□ -0.01
TRAPPC10-204ENST00000459741 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
TRAPPC10-204ENST00000459741 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
TRAPPC10-204ENST00000459741 TSPY4P0CV99 314 aa14.96□□□□□ -0.01
TRAPPC10-204ENST00000459741 TSPY10P0CW01 314 aa14.96□□□□□ -0.01
TRAPPC10-204ENST00000459741 GOLGA6L22H0YM25 854 aa14.96□□□□□ -0.01
TRAPPC10-204ENST00000459741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRAPPC10-204ENST00000459741 RRP7BPQ9NSQ0 103 aa14.94□□□□□ -0.02
TRAPPC10-204ENST00000459741 KIF27Q86VH2 1401 aa14.94□□□□□ -0.02
TRAPPC10-204ENST00000459741 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
TRAPPC10-204ENST00000459741 ZBTB7CA1YPR0 619 aa14.93□□□□□ -0.02
TRAPPC10-204ENST00000459741 CDK11BP21127 795 aaKnown RBP14.93□□□□□ -0.02
TRAPPC10-204ENST00000459741 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
TRAPPC10-204ENST00000459741 SIN3AQ96ST3 1273 aa14.92□□□□□ -0.02
TRAPPC10-204ENST00000459741 LAS1LQ9Y4W2 734 aaKnown RBP14.91□□□□□ -0.02
TRAPPC10-204ENST00000459741 B4GALNT3Q6L9W6 998 aa14.91□□□□□ -0.02
TRAPPC10-204ENST00000459741 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
TRAPPC10-204ENST00000459741 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
TRAPPC10-204ENST00000459741 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
TRAPPC10-204ENST00000459741 NACADO15069 1562 aa14.87□□□□□ -0.03
TRAPPC10-204ENST00000459741 CDCA8Q53HL2 280 aa14.87□□□□□ -0.03
TRAPPC10-204ENST00000459741 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC10-204ENST00000459741 SETD5Q9C0A6 1442 aa14.86□□□□□ -0.03
TRAPPC10-204ENST00000459741 TNNT2P45379 298 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC10-204ENST00000459741 FHAD1B1AJZ9 1412 aa14.86□□□□□ -0.03
TRAPPC10-204ENST00000459741 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
TRAPPC10-204ENST00000459741 NCLP19338 710 aaKnown RBP14.84□□□□□ -0.03
TRAPPC10-204ENST00000459741 L1TD1Q5T7N2 865 aaKnown RBP14.84□□□□□ -0.03
TRAPPC10-204ENST00000459741 NAP1L5Q96NT1 182 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC10-204ENST00000459741 SOGA1O94964 1423 aa14.82□□□□□ -0.04
TRAPPC10-204ENST00000459741 CARD11Q9BXL7 1154 aa14.82□□□□□ -0.04
TRAPPC10-204ENST00000459741 HAP1P54257 671 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC10-204ENST00000459741 PPP1R15AO75807 674 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC10-204ENST00000459741 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
TRAPPC10-204ENST00000459741 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC10-204ENST00000459741 TCERG1O14776 1098 aaKnown RBP14.78□□□□□ -0.04
TRAPPC10-204ENST00000459741 CFAP53Q96M91 514 aa14.78□□□□□ -0.04
TRAPPC10-204ENST00000459741 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
TRAPPC10-204ENST00000459741 RGS3P49796 1198 aa14.76□□□□□ -0.05
TRAPPC10-204ENST00000459741 MS4A1P11836 297 aa14.75□□□□□ -0.05
TRAPPC10-204ENST00000459741 PTMAP06454 111 aaKnown RBP14.75□□□□□ -0.05
TRAPPC10-204ENST00000459741 IPO9Q96P70 1041 aaKnown RBP14.74□□□□□ -0.05
TRAPPC10-204ENST00000459741 HSPA5P11021 654 aaKnown RBP14.74□□□□□ -0.05
TRAPPC10-204ENST00000459741 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC10-204ENST00000459741 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
TRAPPC10-204ENST00000459741 CASC1Q6TDU7 716 aa14.73□□□□□ -0.05
TRAPPC10-204ENST00000459741 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
TRAPPC10-204ENST00000459741 RAB3GAP2Q9H2M9 1393 aa14.72□□□□□ -0.05
TRAPPC10-204ENST00000459741 CECR2Q9BXF3 1484 aa14.72□□□□□ -0.05
TRAPPC10-204ENST00000459741 ARID4BQ4LE39 1312 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC10-204ENST00000459741 CFDP1Q9UEE9 299 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC10-204ENST00000459741 ARHGAP35Q9NRY4 1499 aa14.7□□□□□ -0.06
TRAPPC10-204ENST00000459741 USP35Q9P2H5 1018 aa14.69□□□□□ -0.06
TRAPPC10-204ENST00000459741 FANCIQ9NVI1 1328 aa14.69□□□□□ -0.06
TRAPPC10-204ENST00000459741 PLEKHD1A6NEE1 506 aa14.68□□□□□ -0.06
TRAPPC10-204ENST00000459741 DNTTIP2Q5QJE6 756 aaKnown RBP14.68□□□□□ -0.06
TRAPPC10-204ENST00000459741 SENP3-EIF4A1A0A087X0R7 540 aa14.67□□□□□ -0.06
TRAPPC10-204ENST00000459741 HSCBQ8IWL3 235 aa14.67□□□□□ -0.06
TRAPPC10-204ENST00000459741 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
TRAPPC10-204ENST00000459741 KCNH8Q96L42 1107 aa14.66□□□□□ -0.06
TRAPPC10-204ENST00000459741 NUDCQ9Y266 331 aa14.66□□□□□ -0.06
TRAPPC10-204ENST00000459741 TULP1O00294 542 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC10-204ENST00000459741 HSP90AB1P08238 724 aaKnown RBP14.66□□□□□ -0.06
TRAPPC10-204ENST00000459741 RGL3Q3MIN7 710 aa14.66□□□□□ -0.06
TRAPPC10-204ENST00000459741 PTMSP20962 102 aa14.66□□□□□ -0.06
TRAPPC10-204ENST00000459741 KANK4Q5T7N3 995 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC10-204ENST00000459741 RCAN3Q9UKA8 241 aa14.65□□□□□ -0.06
TRAPPC10-204ENST00000459741 RALBP1Q15311 655 aa14.64□□□□□ -0.07
TRAPPC10-204ENST00000459741 DHX57Q6P158 1386 aaKnown RBP14.64□□□□□ -0.07
TRAPPC10-204ENST00000459741 TMF1P82094 1093 aa14.63□□□□□ -0.07
TRAPPC10-204ENST00000459741 CARMIL1Q5VZK9 1371 aa14.63□□□□□ -0.07
TRAPPC10-204ENST00000459741 NPHP1O15259 732 aa14.63□□□□□ -0.07
TRAPPC10-204ENST00000459741 KTN1Q86UP2 1357 aaKnown RBP14.62□□□□□ -0.07
TRAPPC10-204ENST00000459741 CFAP44Q96MT7 982 aa14.62□□□□□ -0.07
TRAPPC10-204ENST00000459741 FRAT1Q92837 279 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC10-204ENST00000459741 ABCC8Q09428 1581 aa14.62□□□□□ -0.07
TRAPPC10-204ENST00000459741 MROH2BQ7Z745 1585 aa14.61□□□□□ -0.07
TRAPPC10-204ENST00000459741 MSNP26038 577 aaKnown RBP14.61□□□□□ -0.07
TRAPPC10-204ENST00000459741 MAPK8IP3Q9UPT6 1336 aa14.6□□□□□ -0.07
TRAPPC10-204ENST00000459741 CC2D1BQ5T0F9 858 aaKnown RBP14.6□□□□□ -0.07
TRAPPC10-204ENST00000459741 PDE3BQ13370 1112 aa14.6□□□□□ -0.07
TRAPPC10-204ENST00000459741 PNNQ9H307 717 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms