RNA–Protein interactions for RNA: ENST00000458616.1

NELFA-211, Transcript of negative elongation factor complex member A, humanhuman

TSL 3

Gene NELFA, Length 792 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-211ENST00000458616 KIF27Q86VH2 1401 aa29.3■■■□□ 2.28
NELFA-211ENST00000458616 KIAA0586Q9BVV6 1533 aa29.22■■■□□ 2.27
NELFA-211ENST00000458616 CUL7Q14999 1698 aa29.15■■■□□ 2.26
NELFA-211ENST00000458616 CARMIL1Q5VZK9 1371 aa29.15■■■□□ 2.26
NELFA-211ENST00000458616 KIF13AQ9H1H9 1805 aa29.08■■■□□ 2.25
NELFA-211ENST00000458616 NPM1P06748 294 aaKnown RBP eCLIP29.06■■■□□ 2.24
NELFA-211ENST00000458616 ADCY10Q96PN6 1610 aa29.05■■■□□ 2.24
NELFA-211ENST00000458616 FAM69CQ0P6D2 419 aa29.03■■■□□ 2.24
NELFA-211ENST00000458616 ABCC10Q5T3U5 1492 aa29.02■■■□□ 2.24
NELFA-211ENST00000458616 MAPKBP1O60336 1514 aa28.99■■■□□ 2.23
NELFA-211ENST00000458616 PTPRGP23470 1445 aa28.97■■■□□ 2.23
NELFA-211ENST00000458616 AEBP2Q6ZN18 517 aaPredicted RBP28.94■■■□□ 2.22
NELFA-211ENST00000458616 TTBK1Q5TCY1 1321 aaPredicted RBP28.92■■■□□ 2.22
NELFA-211ENST00000458616 TNIKQ9UKE5 1360 aa28.9■■■□□ 2.22
NELFA-211ENST00000458616 DIP2BQ9P265 1576 aa28.89■■■□□ 2.22
NELFA-211ENST00000458616 CARMIL2Q6F5E8 1435 aa28.88■■■□□ 2.21
NELFA-211ENST00000458616 IQGAP2Q13576 1575 aa28.87■■■□□ 2.21
NELFA-211ENST00000458616 RAPGEF2Q9Y4G8 1499 aa28.84■■■□□ 2.21
NELFA-211ENST00000458616 DISP1Q96F81 1524 aa28.84■■■□□ 2.21
NELFA-211ENST00000458616 ABCC2Q92887 1545 aa28.79■■■□□ 2.2
NELFA-211ENST00000458616 UGGT2Q9NYU1 1516 aa28.74■■■□□ 2.19
NELFA-211ENST00000458616 UHRF1BP1LA0JNW5 1464 aa28.74■■■□□ 2.19
NELFA-211ENST00000458616 UACAQ9BZF9 1416 aa28.74■■■□□ 2.19
NELFA-211ENST00000458616 ASXL2Q76L83 1435 aa28.7■■■□□ 2.19
NELFA-211ENST00000458616 TSPOAP1O95153 1857 aa28.66■■■□□ 2.18
NELFA-211ENST00000458616 PLB1Q6P1J6 1458 aa28.66■■■□□ 2.18
NELFA-211ENST00000458616 KDM5BQ9UGL1 1544 aa28.62■■■□□ 2.17
NELFA-211ENST00000458616 KIAA0556O60303 1618 aa28.61■■■□□ 2.17
NELFA-211ENST00000458616 KDM6BO15054 1643 aa28.61■■■□□ 2.17
NELFA-211ENST00000458616 GLI2P10070 1586 aa28.59■■■□□ 2.17
NELFA-211ENST00000458616 PRXQ9BXM0 1461 aa28.59■■■□□ 2.17
NELFA-211ENST00000458616 PPRC1Q5VV67 1664 aaKnown RBP28.53■■■□□ 2.16
NELFA-211ENST00000458616 EPRSP07814 1512 aaKnown RBP28.53■■■□□ 2.16
NELFA-211ENST00000458616 KDM4FA0A1W2PPD8 638 aa28.52■■■□□ 2.16
NELFA-211ENST00000458616 ZCCHC11Q5TAX3 1644 aaKnown RBP28.5■■■□□ 2.15
NELFA-211ENST00000458616 CTTNBP2Q8WZ74 1663 aa28.49■■■□□ 2.15
NELFA-211ENST00000458616 GOLGA3Q08378 1498 aa28.46■■■□□ 2.15
NELFA-211ENST00000458616 COL17A1Q9UMD9 1497 aaPredicted RBP28.46■■■□□ 2.15
NELFA-211ENST00000458616 MAP3K4Q9Y6R4 1608 aa28.41■■■□□ 2.14
NELFA-211ENST00000458616 ABCA8O94911 1581 aa28.41■■■□□ 2.14
NELFA-211ENST00000458616 CSRNP3Q8WYN3 585 aa28.4■■■□□ 2.14
NELFA-211ENST00000458616 WDR7Q9Y4E6 1490 aa28.39■■■□□ 2.13
NELFA-211ENST00000458616 P3H3Q8IVL6 736 aa28.35■■■□□ 2.13
NELFA-211ENST00000458616 KCNH8Q96L42 1107 aa28.32■■■□□ 2.12
NELFA-211ENST00000458616 TEX14Q8IWB6 1497 aa28.31■■■□□ 2.12
NELFA-211ENST00000458616 CD109Q6YHK3 1445 aa28.26■■■□□ 2.11
NELFA-211ENST00000458616 ARID3CA6NKF2 412 aa28.24■■■□□ 2.11
NELFA-211ENST00000458616 ATP10BO94823 1461 aa28.22■■■□□ 2.11
NELFA-211ENST00000458616 MAGI3Q5TCQ9 1506 aa28.22■■■□□ 2.11
NELFA-211ENST00000458616 SAMD9Q5K651 1589 aa28.17■■■□□ 2.1
NELFA-211ENST00000458616 ADGRL1O94910 1474 aa28.16■■■□□ 2.1
NELFA-211ENST00000458616 EEA1Q15075 1411 aa28.16■■■□□ 2.1
NELFA-211ENST00000458616 CFAP43Q8NDM7 1665 aa28.16■■■□□ 2.1
NELFA-211ENST00000458616 FAM9AQ8IZU1 332 aaPredicted RBP28.15■■■□□ 2.1
NELFA-211ENST00000458616 RANGAP1P46060 587 aaPredicted RBP28.1■■■□□ 2.09
NELFA-211ENST00000458616 RAPGEF6Q8TEU7 1601 aa28.04■■■□□ 2.08
NELFA-211ENST00000458616 FHOD3Q2V2M9 1422 aa28.03■■■□□ 2.08
NELFA-211ENST00000458616 NUP153P49790 1475 aaKnown RBP28.02■■■□□ 2.08
NELFA-211ENST00000458616 ARAP3Q8WWN8 1544 aa28.01■■■□□ 2.07
NELFA-211ENST00000458616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.99■■■□□ 2.07
NELFA-211ENST00000458616 HNRNPUL2Q1KMD3 747 aaKnown RBP27.99■■■□□ 2.07
NELFA-211ENST00000458616 ABCA9Q8IUA7 1624 aa27.99■■■□□ 2.07
NELFA-211ENST00000458616 PHLDB1Q86UU1 1377 aa27.93■■■□□ 2.06
NELFA-211ENST00000458616 KIF21BO75037 1637 aa27.92■■■□□ 2.06
NELFA-211ENST00000458616 RAPGEF3O95398 923 aa27.91■■■□□ 2.06
NELFA-211ENST00000458616 CHIC1Q5VXU3 224 aa27.9■■■□□ 2.06
NELFA-211ENST00000458616 PLEKHD1A6NEE1 506 aa27.88■■■□□ 2.05
NELFA-211ENST00000458616 NEO1Q92859 1461 aa27.86■■■□□ 2.05
NELFA-211ENST00000458616 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
NELFA-211ENST00000458616 EFCAB5A4FU69 1503 aa27.85■■■□□ 2.05
NELFA-211ENST00000458616 UBTFP17480 764 aaKnown RBP27.8■■■□□ 2.04
NELFA-211ENST00000458616 FRMPD1Q5SYB0 1578 aa27.76■■■□□ 2.03
NELFA-211ENST00000458616 HECW2Q9P2P5 1572 aa27.75■■■□□ 2.03
NELFA-211ENST00000458616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.75■■■□□ 2.03
NELFA-211ENST00000458616 CDK13Q14004 1512 aaKnown RBP27.72■■■□□ 2.03
NELFA-211ENST00000458616 AKNAQ7Z591 1439 aa27.72■■■□□ 2.03
NELFA-211ENST00000458616 ARHGAP35Q9NRY4 1499 aa27.7■■■□□ 2.03
NELFA-211ENST00000458616 FANCAO15360 1455 aa27.68■■■□□ 2.02
NELFA-211ENST00000458616 DENND4BO75064 1496 aaPredicted RBP27.68■■■□□ 2.02
NELFA-211ENST00000458616 TTC37Q6PGP7 1564 aa27.67■■■□□ 2.02
NELFA-211ENST00000458616 ADAMTSL3P82987 1691 aa27.65■■■□□ 2.02
NELFA-211ENST00000458616 ATP1B4Q9UN42 357 aaPredicted RBP27.65■■■□□ 2.02
NELFA-211ENST00000458616 FMN1Q68DA7 1419 aa27.63■■■□□ 2.01
NELFA-211ENST00000458616 ILDR1Q86SU0 546 aaPredicted RBP27.62■■■□□ 2.01
NELFA-211ENST00000458616 PTPRMP28827 1452 aa27.62■■■□□ 2.01
NELFA-211ENST00000458616 RICTORQ6R327 1708 aa27.61■■■□□ 2.01
NELFA-211ENST00000458616 ARID4BQ4LE39 1312 aaPredicted RBP27.61■■■□□ 2.01
NELFA-211ENST00000458616 PLCH2O75038 1416 aa27.6■■■□□ 2.01
NELFA-211ENST00000458616 BCORL1Q5H9F3 1711 aa27.57■■■□□ 2
NELFA-211ENST00000458616 CFAP74Q9C0B2 1584 aa27.56■■■□□ 2
NELFA-211ENST00000458616 ARHGEF40Q8TER5 1519 aa27.55■■■□□ 2
NELFA-211ENST00000458616 HECW1Q76N89 1606 aa27.54■■■□□ 2
NELFA-211ENST00000458616 YEATS2Q9ULM3 1422 aa27.54■■■□□ 2
NELFA-211ENST00000458616 SCAPERQ9BY12 1400 aa27.53■■■□□ 2
NELFA-211ENST00000458616 CDK11AQ9UQ88 783 aaPredicted RBP27.52■■■□□ 2
NELFA-211ENST00000458616 ZMYM4Q5VZL5 1548 aa27.51■■■□□ 2
NELFA-211ENST00000458616 MADDQ8WXG6 1647 aa27.51■■□□□ 1.99
NELFA-211ENST00000458616 EFCAB2Q5VUJ9 269 aa27.49■■□□□ 1.99
NELFA-211ENST00000458616 TROQ12816 1431 aaPredicted RBP27.48■■□□□ 1.99
NELFA-211ENST00000458616 MAGI2Q86UL8 1455 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms