RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ADAMTS12P58397 1594 aa14.24□□□□□ -0.13
CLTCL1-204ENST00000458188 PRXQ9BXM0 1461 aa14.23□□□□□ -0.13
CLTCL1-204ENST00000458188 RAPGEF2Q9Y4G8 1499 aa14.23□□□□□ -0.13
CLTCL1-204ENST00000458188 GRIN2AQ12879 1464 aa14.22□□□□□ -0.13
CLTCL1-204ENST00000458188 UBTFP17480 764 aaKnown RBP14.21□□□□□ -0.13
CLTCL1-204ENST00000458188 RANGAP1P46060 587 aaPredicted RBP14.21□□□□□ -0.13
CLTCL1-204ENST00000458188 CUL7Q14999 1698 aa14.17□□□□□ -0.14
CLTCL1-204ENST00000458188 CEP170Q5SW79 1584 aa14.13□□□□□ -0.15
CLTCL1-204ENST00000458188 NUP160Q12769 1436 aa14.13□□□□□ -0.15
CLTCL1-204ENST00000458188 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
CLTCL1-204ENST00000458188 JPH4Q96JJ6 628 aa14.11□□□□□ -0.15
CLTCL1-204ENST00000458188 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
CLTCL1-204ENST00000458188 KIF21BO75037 1637 aa14.08□□□□□ -0.15
CLTCL1-204ENST00000458188 P3H3Q8IVL6 736 aa14.08□□□□□ -0.16
CLTCL1-204ENST00000458188 KIAA0586Q9BVV6 1533 aa14.08□□□□□ -0.16
CLTCL1-204ENST00000458188 TTBK1Q5TCY1 1321 aaPredicted RBP14.08□□□□□ -0.16
CLTCL1-204ENST00000458188 PRG4Q92954 1404 aaPredicted RBP14.03□□□□□ -0.16
CLTCL1-204ENST00000458188 ILDR1Q86SU0 546 aaPredicted RBP14.02□□□□□ -0.17
CLTCL1-204ENST00000458188 TNIKQ9UKE5 1360 aa14.01□□□□□ -0.17
CLTCL1-204ENST00000458188 IQGAP2Q13576 1575 aa14□□□□□ -0.17
CLTCL1-204ENST00000458188 ERCC6L2Q5T890 1561 aa13.99□□□□□ -0.17
CLTCL1-204ENST00000458188 DISP1Q96F81 1524 aa13.94□□□□□ -0.18
CLTCL1-204ENST00000458188 CARMIL2Q6F5E8 1435 aa13.93□□□□□ -0.18
CLTCL1-204ENST00000458188 CTTNBP2Q8WZ74 1663 aa13.93□□□□□ -0.18
CLTCL1-204ENST00000458188 UGGT2Q9NYU1 1516 aa13.93□□□□□ -0.18
CLTCL1-204ENST00000458188 CLIP1P30622 1438 aa13.91□□□□□ -0.18
CLTCL1-204ENST00000458188 FHOD3Q2V2M9 1422 aa13.91□□□□□ -0.18
CLTCL1-204ENST00000458188 SHROOM2Q13796 1616 aa13.91□□□□□ -0.18
CLTCL1-204ENST00000458188 CEP162Q5TB80 1403 aa13.9□□□□□ -0.18
CLTCL1-204ENST00000458188 PTPRGP23470 1445 aa13.9□□□□□ -0.19
CLTCL1-204ENST00000458188 ARHGAP35Q9NRY4 1499 aa13.89□□□□□ -0.19
CLTCL1-204ENST00000458188 ARID3CA6NKF2 412 aa13.88□□□□□ -0.19
CLTCL1-204ENST00000458188 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
CLTCL1-204ENST00000458188 KIF13AQ9H1H9 1805 aa13.87□□□□□ -0.19
CLTCL1-204ENST00000458188 KIAA0556O60303 1618 aa13.86□□□□□ -0.19
CLTCL1-204ENST00000458188 KDM4FA0A1W2PPD8 638 aa13.84□□□□□ -0.19
CLTCL1-204ENST00000458188 FAM69CQ0P6D2 419 aa13.83□□□□□ -0.2
CLTCL1-204ENST00000458188 SAMD9Q5K651 1589 aa13.83□□□□□ -0.2
CLTCL1-204ENST00000458188 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
CLTCL1-204ENST00000458188 PLB1Q6P1J6 1458 aa13.8□□□□□ -0.2
CLTCL1-204ENST00000458188 EFCAB5A4FU69 1503 aa13.8□□□□□ -0.2
CLTCL1-204ENST00000458188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
CLTCL1-204ENST00000458188 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
CLTCL1-204ENST00000458188 UACAQ9BZF9 1416 aa13.78□□□□□ -0.2
CLTCL1-204ENST00000458188 ABCC10Q5T3U5 1492 aa13.74□□□□□ -0.21
CLTCL1-204ENST00000458188 FMN1Q68DA7 1419 aa13.74□□□□□ -0.21
CLTCL1-204ENST00000458188 KDM6BO15054 1643 aa13.73□□□□□ -0.21
CLTCL1-204ENST00000458188 ABCA8O94911 1581 aa13.71□□□□□ -0.22
CLTCL1-204ENST00000458188 VPS8Q8N3P4 1428 aa13.69□□□□□ -0.22
CLTCL1-204ENST00000458188 ABCC2Q92887 1545 aa13.69□□□□□ -0.22
CLTCL1-204ENST00000458188 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
CLTCL1-204ENST00000458188 NUP153P49790 1475 aaKnown RBP13.68□□□□□ -0.22
CLTCL1-204ENST00000458188 CASKIN1Q8WXD9 1431 aa13.68□□□□□ -0.22
CLTCL1-204ENST00000458188 PPARGC1BQ86YN6 1023 aaKnown RBP13.68□□□□□ -0.22
CLTCL1-204ENST00000458188 UHRF1BP1LA0JNW5 1464 aa13.67□□□□□ -0.22
CLTCL1-204ENST00000458188 ATP10BO94823 1461 aa13.67□□□□□ -0.22
CLTCL1-204ENST00000458188 KCNH8Q96L42 1107 aa13.67□□□□□ -0.22
CLTCL1-204ENST00000458188 TSPOAP1O95153 1857 aa13.67□□□□□ -0.22
CLTCL1-204ENST00000458188 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
CLTCL1-204ENST00000458188 MAPKBP1O60336 1514 aa13.66□□□□□ -0.22
CLTCL1-204ENST00000458188 PCF11O94913 1555 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-204ENST00000458188 DIP2BQ9P265 1576 aa13.66□□□□□ -0.22
CLTCL1-204ENST00000458188 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
CLTCL1-204ENST00000458188 PLEKHD1A6NEE1 506 aa13.63□□□□□ -0.23
CLTCL1-204ENST00000458188 APLP2Q06481 763 aa13.63□□□□□ -0.23
CLTCL1-204ENST00000458188 EPRSP07814 1512 aaKnown RBP13.63□□□□□ -0.23
CLTCL1-204ENST00000458188 KDM5BQ9UGL1 1544 aa13.63□□□□□ -0.23
CLTCL1-204ENST00000458188 KANK4Q5T7N3 995 aaPredicted RBP13.62□□□□□ -0.23
CLTCL1-204ENST00000458188 FYCO1Q9BQS8 1478 aa13.61□□□□□ -0.23
CLTCL1-204ENST00000458188 ASXL2Q76L83 1435 aa13.6□□□□□ -0.23
CLTCL1-204ENST00000458188 HECW1Q76N89 1606 aa13.6□□□□□ -0.23
CLTCL1-204ENST00000458188 CDK11AQ9UQ88 783 aaPredicted RBP13.59□□□□□ -0.23
CLTCL1-204ENST00000458188 ZCCHC11Q5TAX3 1644 aaKnown RBP13.58□□□□□ -0.24
CLTCL1-204ENST00000458188 ADGRL1O94910 1474 aa13.58□□□□□ -0.24
CLTCL1-204ENST00000458188 FBXO41Q8TF61 875 aa13.56□□□□□ -0.24
CLTCL1-204ENST00000458188 HECW2Q9P2P5 1572 aa13.56□□□□□ -0.24
CLTCL1-204ENST00000458188 CCDC18Q5T9S5 1454 aa13.55□□□□□ -0.24
CLTCL1-204ENST00000458188 MTUS2Q5JR59 1369 aa13.54□□□□□ -0.24
CLTCL1-204ENST00000458188 MAGI3Q5TCQ9 1506 aa13.54□□□□□ -0.24
CLTCL1-204ENST00000458188 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
CLTCL1-204ENST00000458188 WDR7Q9Y4E6 1490 aa13.53□□□□□ -0.24
CLTCL1-204ENST00000458188 TROQ12816 1431 aaPredicted RBP13.5□□□□□ -0.25
CLTCL1-204ENST00000458188 TIAM1Q13009 1591 aa13.49□□□□□ -0.25
CLTCL1-204ENST00000458188 LRRC9Q6ZRR7 1453 aa13.48□□□□□ -0.25
CLTCL1-204ENST00000458188 MAP3K1Q13233 1512 aa13.45□□□□□ -0.26
CLTCL1-204ENST00000458188 ZNF777Q9ULD5 760 aaPredicted RBP13.44□□□□□ -0.26
CLTCL1-204ENST00000458188 KIF14Q15058 1648 aa13.43□□□□□ -0.26
CLTCL1-204ENST00000458188 CD109Q6YHK3 1445 aa13.43□□□□□ -0.26
CLTCL1-204ENST00000458188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLTCL1-204ENST00000458188 CFAP43Q8NDM7 1665 aa13.42□□□□□ -0.26
CLTCL1-204ENST00000458188 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
CLTCL1-204ENST00000458188 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
CLTCL1-204ENST00000458188 GLI2P10070 1586 aa13.41□□□□□ -0.26
CLTCL1-204ENST00000458188 EHBP1L1Q8N3D4 1523 aa13.41□□□□□ -0.26
CLTCL1-204ENST00000458188 PPRC1Q5VV67 1664 aaKnown RBP13.4□□□□□ -0.26
CLTCL1-204ENST00000458188 CFDP1Q9UEE9 299 aaPredicted RBP13.4□□□□□ -0.26
CLTCL1-204ENST00000458188 PHLDB1Q86UU1 1377 aa13.4□□□□□ -0.26
CLTCL1-204ENST00000458188 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
CLTCL1-204ENST00000458188 TTC37Q6PGP7 1564 aa13.38□□□□□ -0.27
CLTCL1-204ENST00000458188 TEX14Q8IWB6 1497 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms