RNA–Protein interactions for RNA: ENST00000458113.6

NCOR1-210, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 3,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-210ENST00000458113 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
NCOR1-210ENST00000458113 LAS1LQ9Y4W2 734 aaKnown RBP12.97□□□□□ -0.33
NCOR1-210ENST00000458113 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
NCOR1-210ENST00000458113 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.33
NCOR1-210ENST00000458113 IPO9Q96P70 1041 aaKnown RBP12.96□□□□□ -0.34
NCOR1-210ENST00000458113 BRPF3Q9ULD4 1205 aa12.96□□□□□ -0.34
NCOR1-210ENST00000458113 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
NCOR1-210ENST00000458113 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
NCOR1-210ENST00000458113 ZMYND15Q9H091 742 aa12.91□□□□□ -0.34
NCOR1-210ENST00000458113 HMGXB3Q12766 1538 aa12.87□□□□□ -0.35
NCOR1-210ENST00000458113 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
NCOR1-210ENST00000458113 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
NCOR1-210ENST00000458113 USP35Q9P2H5 1018 aa12.85□□□□□ -0.35
NCOR1-210ENST00000458113 A0A0U1RQG5 324 aaPredicted RBP12.84□□□□□ -0.35
NCOR1-210ENST00000458113 PPM1GO15355 546 aaPredicted RBP12.84□□□□□ -0.35
NCOR1-210ENST00000458113 HIRIP3Q9BW71 556 aaPredicted RBP12.83□□□□□ -0.35
NCOR1-210ENST00000458113 DHX57Q6P158 1386 aaKnown RBP12.83□□□□□ -0.36
NCOR1-210ENST00000458113 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
NCOR1-210ENST00000458113 PRDM2Q13029 1718 aa12.8□□□□□ -0.36
NCOR1-210ENST00000458113 TNIKQ9UKE5 1360 aa12.8□□□□□ -0.36
NCOR1-210ENST00000458113 GSE1Q14687 1217 aa12.79□□□□□ -0.36
NCOR1-210ENST00000458113 WASHC2AQ641Q2 1341 aa12.78□□□□□ -0.36
NCOR1-210ENST00000458113 HSP90AA2PQ14568 343 aaPredicted RBP12.77□□□□□ -0.37
NCOR1-210ENST00000458113 NAP1L5Q96NT1 182 aaPredicted RBP12.77□□□□□ -0.37
NCOR1-210ENST00000458113 ATAD2BQ9ULI0 1458 aa12.77□□□□□ -0.37
NCOR1-210ENST00000458113 NCAPD3P42695 1498 aa12.75□□□□□ -0.37
NCOR1-210ENST00000458113 WASHC2CQ9Y4E1 1318 aa12.74□□□□□ -0.37
NCOR1-210ENST00000458113 FAM43AQ8N2R8 423 aa12.72□□□□□ -0.37
NCOR1-210ENST00000458113 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.37
NCOR1-210ENST00000458113 PPP1R15AO75807 674 aaPredicted RBP12.69□□□□□ -0.38
NCOR1-210ENST00000458113 FRAT1Q92837 279 aaPredicted RBP12.69□□□□□ -0.38
NCOR1-210ENST00000458113 SIN3AQ96ST3 1273 aa12.68□□□□□ -0.38
NCOR1-210ENST00000458113 EEA1Q15075 1411 aa12.68□□□□□ -0.38
NCOR1-210ENST00000458113 FAM9BQ8IZU0 186 aa12.68□□□□□ -0.38
NCOR1-210ENST00000458113 CCDC88BA6NC98 1476 aa12.67□□□□□ -0.38
NCOR1-210ENST00000458113 PNNQ9H307 717 aaKnown RBP12.63□□□□□ -0.39
NCOR1-210ENST00000458113 DDRGK1Q96HY6 314 aa12.63□□□□□ -0.39
NCOR1-210ENST00000458113 ARXQ96QS3 562 aa12.62□□□□□ -0.39
NCOR1-210ENST00000458113 RRP9O43818 475 aaKnown RBP12.62□□□□□ -0.39
NCOR1-210ENST00000458113 NFKBIBQ15653 356 aa12.61□□□□□ -0.39
NCOR1-210ENST00000458113 RBM10P98175 930 aaKnown RBP12.61□□□□□ -0.39
NCOR1-210ENST00000458113 PDE4CQ08493 712 aa12.61□□□□□ -0.39
NCOR1-210ENST00000458113 ARID4BQ4LE39 1312 aaPredicted RBP12.61□□□□□ -0.39
NCOR1-210ENST00000458113 CLIP1P30622 1438 aa12.61□□□□□ -0.39
NCOR1-210ENST00000458113 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
NCOR1-210ENST00000458113 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
NCOR1-210ENST00000458113 SOGA1O94964 1423 aa12.57□□□□□ -0.4
NCOR1-210ENST00000458113 MRS2Q9HD23 443 aa12.57□□□□□ -0.4
NCOR1-210ENST00000458113 BIVM-ERCC5R4GMW8 1640 aa12.55□□□□□ -0.4
NCOR1-210ENST00000458113 CNGB1Q14028 1251 aaPredicted RBP12.55□□□□□ -0.4
NCOR1-210ENST00000458113 PDE4AP27815 886 aa12.54□□□□□ -0.4
NCOR1-210ENST00000458113 VPS8Q8N3P4 1428 aa12.54□□□□□ -0.4
NCOR1-210ENST00000458113 CC2D2AQ9P2K1 1620 aa12.54□□□□□ -0.4
NCOR1-210ENST00000458113 SLC4A3P48751 1232 aa12.53□□□□□ -0.4
NCOR1-210ENST00000458113 ABCC8Q09428 1581 aa12.53□□□□□ -0.4
NCOR1-210ENST00000458113 TCERG1O14776 1098 aaKnown RBP12.53□□□□□ -0.4
NCOR1-210ENST00000458113 AAMPQ13685 434 aa12.5□□□□□ -0.41
NCOR1-210ENST00000458113 FGD1P98174 961 aa12.5□□□□□ -0.41
NCOR1-210ENST00000458113 L1TD1Q5T7N2 865 aaKnown RBP12.49□□□□□ -0.41
NCOR1-210ENST00000458113 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
NCOR1-210ENST00000458113 RRAGDQ9NQL2 400 aaPredicted RBP12.49□□□□□ -0.41
NCOR1-210ENST00000458113 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
NCOR1-210ENST00000458113 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
NCOR1-210ENST00000458113 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
NCOR1-210ENST00000458113 FRAT2O75474 233 aaPredicted RBP12.47□□□□□ -0.41
NCOR1-210ENST00000458113 TONSLQ96HA7 1378 aa12.47□□□□□ -0.41
NCOR1-210ENST00000458113 SENP3-EIF4A1A0A087X0R7 540 aa12.47□□□□□ -0.41
NCOR1-210ENST00000458113 CFTRP13569 1480 aa12.46□□□□□ -0.41
NCOR1-210ENST00000458113 RAB3GAP2Q9H2M9 1393 aa12.46□□□□□ -0.41
NCOR1-210ENST00000458113 TOP2BQ02880 1626 aa12.45□□□□□ -0.42
NCOR1-210ENST00000458113 AKNAQ7Z591 1439 aa12.44□□□□□ -0.42
NCOR1-210ENST00000458113 PDIA4P13667 645 aaKnown RBP12.44□□□□□ -0.42
NCOR1-210ENST00000458113 BACH2Q9BYV9 841 aa12.43□□□□□ -0.42
NCOR1-210ENST00000458113 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
NCOR1-210ENST00000458113 FAM50AQ14320 339 aaKnown RBP12.41□□□□□ -0.42
NCOR1-210ENST00000458113 NUDCQ9Y266 331 aa12.41□□□□□ -0.42
NCOR1-210ENST00000458113 RGS3P49796 1198 aa12.41□□□□□ -0.42
NCOR1-210ENST00000458113 RUSC2Q8N2Y8 1516 aa12.41□□□□□ -0.42
NCOR1-210ENST00000458113 CCNB3Q8WWL7 1395 aa12.41□□□□□ -0.42
NCOR1-210ENST00000458113 CCDC184Q52MB2 194 aa12.41□□□□□ -0.42
NCOR1-210ENST00000458113 KANK4Q5T7N3 995 aaPredicted RBP12.41□□□□□ -0.42
NCOR1-210ENST00000458113 CEP164Q9UPV0 1460 aa12.4□□□□□ -0.42
NCOR1-210ENST00000458113 MS4A1P11836 297 aa12.39□□□□□ -0.43
NCOR1-210ENST00000458113 SYNJ1O43426 1573 aa12.36□□□□□ -0.43
NCOR1-210ENST00000458113 TRIM44Q96DX7 344 aaPredicted RBP12.36□□□□□ -0.43
NCOR1-210ENST00000458113 POGKQ9P215 609 aa12.36□□□□□ -0.43
NCOR1-210ENST00000458113 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
NCOR1-210ENST00000458113 LAMC3Q9Y6N6 1575 aa12.36□□□□□ -0.43
NCOR1-210ENST00000458113 PDCL3Q9H2J4 239 aa12.35□□□□□ -0.43
NCOR1-210ENST00000458113 EXOC6Q8TAG9 804 aa12.35□□□□□ -0.43
NCOR1-210ENST00000458113 ARID3AQ99856 593 aa12.35□□□□□ -0.43
NCOR1-210ENST00000458113 GOLGA6L3A6NEY3 463 aa12.34□□□□□ -0.43
NCOR1-210ENST00000458113 CLCN1P35523 988 aa12.34□□□□□ -0.43
NCOR1-210ENST00000458113 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
NCOR1-210ENST00000458113 SETD5Q9C0A6 1442 aa12.33□□□□□ -0.44
NCOR1-210ENST00000458113 GZF1Q9H116 711 aaPredicted RBP12.32□□□□□ -0.44
NCOR1-210ENST00000458113 TPM2P07951 284 aa12.31□□□□□ -0.44
NCOR1-210ENST00000458113 BBXQ8WY36 941 aaPredicted RBP12.31□□□□□ -0.44
NCOR1-210ENST00000458113 PRKRIP1Q9H875 184 aaPredicted RBP12.31□□□□□ -0.44
NCOR1-210ENST00000458113 MAPKBP1O60336 1514 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms