RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ADCY10Q96PN6 1610 aa21.32■■□□□ 1
LMCD1-206ENST00000456506 JPH4Q96JJ6 628 aa21.3■■□□□ 1
LMCD1-206ENST00000456506 MAPKBP1O60336 1514 aa21.28■■□□□ 1
LMCD1-206ENST00000456506 DIP2BQ9P265 1576 aa21.27■□□□□ 0.99
LMCD1-206ENST00000456506 KIAA0586Q9BVV6 1533 aa21.23■□□□□ 0.99
LMCD1-206ENST00000456506 ABCC10Q5T3U5 1492 aa21.22■□□□□ 0.99
LMCD1-206ENST00000456506 IGF1RP08069 1367 aa21.21■□□□□ 0.99
LMCD1-206ENST00000456506 AEBP2Q6ZN18 517 aaPredicted RBP21.18■□□□□ 0.98
LMCD1-206ENST00000456506 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
LMCD1-206ENST00000456506 TSPOAP1O95153 1857 aa21.15■□□□□ 0.98
LMCD1-206ENST00000456506 KDM6BO15054 1643 aa21.07■□□□□ 0.96
LMCD1-206ENST00000456506 PPRC1Q5VV67 1664 aaKnown RBP21.06■□□□□ 0.96
LMCD1-206ENST00000456506 FAM69CQ0P6D2 419 aa21.06■□□□□ 0.96
LMCD1-206ENST00000456506 IQGAP2Q13576 1575 aa21.06■□□□□ 0.96
LMCD1-206ENST00000456506 CARMIL1Q5VZK9 1371 aa21.02■□□□□ 0.96
LMCD1-206ENST00000456506 NPM1P06748 294 aaKnown RBP eCLIP21.02■□□□□ 0.96
LMCD1-206ENST00000456506 ABCC2Q92887 1545 aa20.99■□□□□ 0.95
LMCD1-206ENST00000456506 DISP1Q96F81 1524 aa20.98■□□□□ 0.95
LMCD1-206ENST00000456506 GLI2P10070 1586 aa20.97■□□□□ 0.95
LMCD1-206ENST00000456506 PTPRGP23470 1445 aa20.97■□□□□ 0.95
LMCD1-206ENST00000456506 TNIKQ9UKE5 1360 aa20.96■□□□□ 0.95
LMCD1-206ENST00000456506 UHRF1BP1LA0JNW5 1464 aa20.95■□□□□ 0.94
LMCD1-206ENST00000456506 CARMIL2Q6F5E8 1435 aa20.93■□□□□ 0.94
LMCD1-206ENST00000456506 UGGT2Q9NYU1 1516 aa20.93■□□□□ 0.94
LMCD1-206ENST00000456506 CTTNBP2Q8WZ74 1663 aa20.92■□□□□ 0.94
LMCD1-206ENST00000456506 MAP3K4Q9Y6R4 1608 aa20.91■□□□□ 0.94
LMCD1-206ENST00000456506 ZCCHC11Q5TAX3 1644 aaKnown RBP20.9■□□□□ 0.94
LMCD1-206ENST00000456506 KIAA0556O60303 1618 aa20.89■□□□□ 0.94
LMCD1-206ENST00000456506 ASXL2Q76L83 1435 aa20.89■□□□□ 0.94
LMCD1-206ENST00000456506 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
LMCD1-206ENST00000456506 KDM5BQ9UGL1 1544 aa20.87■□□□□ 0.93
LMCD1-206ENST00000456506 RAPGEF2Q9Y4G8 1499 aa20.86■□□□□ 0.93
LMCD1-206ENST00000456506 UACAQ9BZF9 1416 aa20.86■□□□□ 0.93
LMCD1-206ENST00000456506 KDM4FA0A1W2PPD8 638 aa20.85■□□□□ 0.93
LMCD1-206ENST00000456506 EPRSP07814 1512 aaKnown RBP20.81■□□□□ 0.92
LMCD1-206ENST00000456506 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
LMCD1-206ENST00000456506 COL17A1Q9UMD9 1497 aaPredicted RBP20.78■□□□□ 0.92
LMCD1-206ENST00000456506 ABCA8O94911 1581 aa20.73■□□□□ 0.91
LMCD1-206ENST00000456506 CFAP43Q8NDM7 1665 aa20.71■□□□□ 0.91
LMCD1-206ENST00000456506 ADGRL1O94910 1474 aa20.69■□□□□ 0.9
LMCD1-206ENST00000456506 TEX14Q8IWB6 1497 aa20.68■□□□□ 0.9
LMCD1-206ENST00000456506 WDR7Q9Y4E6 1490 aa20.68■□□□□ 0.9
LMCD1-206ENST00000456506 PRXQ9BXM0 1461 aa20.66■□□□□ 0.9
LMCD1-206ENST00000456506 GOLGA3Q08378 1498 aa20.63■□□□□ 0.89
LMCD1-206ENST00000456506 MAGI3Q5TCQ9 1506 aa20.6■□□□□ 0.89
LMCD1-206ENST00000456506 SAMD9Q5K651 1589 aa20.55■□□□□ 0.88
LMCD1-206ENST00000456506 KIF21BO75037 1637 aa20.52■□□□□ 0.88
LMCD1-206ENST00000456506 CD109Q6YHK3 1445 aa20.52■□□□□ 0.87
LMCD1-206ENST00000456506 ABCA9Q8IUA7 1624 aa20.51■□□□□ 0.87
LMCD1-206ENST00000456506 HECW2Q9P2P5 1572 aa20.51■□□□□ 0.87
LMCD1-206ENST00000456506 ATP10BO94823 1461 aa20.47■□□□□ 0.87
LMCD1-206ENST00000456506 RAPGEF6Q8TEU7 1601 aa20.46■□□□□ 0.87
LMCD1-206ENST00000456506 ARAP3Q8WWN8 1544 aa20.46■□□□□ 0.87
LMCD1-206ENST00000456506 KCNH8Q96L42 1107 aa20.41■□□□□ 0.86
LMCD1-206ENST00000456506 ADAMTSL3P82987 1691 aa20.38■□□□□ 0.85
LMCD1-206ENST00000456506 FRMPD1Q5SYB0 1578 aa20.38■□□□□ 0.85
LMCD1-206ENST00000456506 NUP153P49790 1475 aaKnown RBP20.34■□□□□ 0.85
LMCD1-206ENST00000456506 ILDR1Q86SU0 546 aaPredicted RBP20.33■□□□□ 0.85
LMCD1-206ENST00000456506 P3H3Q8IVL6 736 aa20.33■□□□□ 0.85
LMCD1-206ENST00000456506 RICTORQ6R327 1708 aa20.33■□□□□ 0.84
LMCD1-206ENST00000456506 BCORL1Q5H9F3 1711 aa20.31■□□□□ 0.84
LMCD1-206ENST00000456506 NEO1Q92859 1461 aa20.3■□□□□ 0.84
LMCD1-206ENST00000456506 ARID3CA6NKF2 412 aa20.3■□□□□ 0.84
LMCD1-206ENST00000456506 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
LMCD1-206ENST00000456506 PHLDB1Q86UU1 1377 aa20.29■□□□□ 0.84
LMCD1-206ENST00000456506 EEA1Q15075 1411 aa20.26■□□□□ 0.83
LMCD1-206ENST00000456506 SIGLEC1Q9BZZ2 1709 aa20.24■□□□□ 0.83
LMCD1-206ENST00000456506 FHOD3Q2V2M9 1422 aa20.24■□□□□ 0.83
LMCD1-206ENST00000456506 MADDQ8WXG6 1647 aa20.24■□□□□ 0.83
LMCD1-206ENST00000456506 EFCAB5A4FU69 1503 aa20.22■□□□□ 0.83
LMCD1-206ENST00000456506 ARHGEF40Q8TER5 1519 aa20.22■□□□□ 0.83
LMCD1-206ENST00000456506 TTC37Q6PGP7 1564 aa20.22■□□□□ 0.83
LMCD1-206ENST00000456506 CFAP74Q9C0B2 1584 aa20.22■□□□□ 0.83
LMCD1-206ENST00000456506 PTPRMP28827 1452 aa20.22■□□□□ 0.83
LMCD1-206ENST00000456506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.22■□□□□ 0.83
LMCD1-206ENST00000456506 RAPGEF3O95398 923 aa20.19■□□□□ 0.82
LMCD1-206ENST00000456506 RIMS1Q86UR5 1692 aaKnown RBP20.17■□□□□ 0.82
LMCD1-206ENST00000456506 ZMYM4Q5VZL5 1548 aa20.17■□□□□ 0.82
LMCD1-206ENST00000456506 FAM9AQ8IZU1 332 aaPredicted RBP20.16■□□□□ 0.82
LMCD1-206ENST00000456506 LRRIQ1Q96JM4 1722 aa20.14■□□□□ 0.81
LMCD1-206ENST00000456506 FANCAO15360 1455 aa20.12■□□□□ 0.81
LMCD1-206ENST00000456506 CDK13Q14004 1512 aaKnown RBP20.12■□□□□ 0.81
LMCD1-206ENST00000456506 AKNAQ7Z591 1439 aa20.11■□□□□ 0.81
LMCD1-206ENST00000456506 DENND4BO75064 1496 aaPredicted RBP20.11■□□□□ 0.81
LMCD1-206ENST00000456506 MYO5CQ9NQX4 1742 aa20.1■□□□□ 0.81
LMCD1-206ENST00000456506 PCF11O94913 1555 aaKnown RBP20.1■□□□□ 0.81
LMCD1-206ENST00000456506 LMTK3Q96Q04 1460 aa20.09■□□□□ 0.81
LMCD1-206ENST00000456506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.81
LMCD1-206ENST00000456506 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.81
LMCD1-206ENST00000456506 HECW1Q76N89 1606 aa20.08■□□□□ 0.8
LMCD1-206ENST00000456506 FER1L4A9Z1Z3 1794 aa20.07■□□□□ 0.8
LMCD1-206ENST00000456506 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
LMCD1-206ENST00000456506 ZFYVE16Q7Z3T8 1539 aa20.06■□□□□ 0.8
LMCD1-206ENST00000456506 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
LMCD1-206ENST00000456506 KIF14Q15058 1648 aa20.04■□□□□ 0.8
LMCD1-206ENST00000456506 YEATS2Q9ULM3 1422 aa20.03■□□□□ 0.8
LMCD1-206ENST00000456506 MAGI2Q86UL8 1455 aa20.02■□□□□ 0.8
LMCD1-206ENST00000456506 ARHGAP35Q9NRY4 1499 aa20.01■□□□□ 0.79
LMCD1-206ENST00000456506 PLCH2O75038 1416 aa20■□□□□ 0.79
LMCD1-206ENST00000456506 POGZQ7Z3K3 1410 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms