RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 NAP1L5Q96NT1 182 aaPredicted RBP6.63□□□□□ -1.35
PCDH9-203ENST00000456367 HOMEZQ8IX15 550 aa6.62□□□□□ -1.35
PCDH9-203ENST00000456367 TNIKQ9UKE5 1360 aa6.62□□□□□ -1.35
PCDH9-203ENST00000456367 TMC1Q8TDI8 760 aa6.61□□□□□ -1.35
PCDH9-203ENST00000456367 CEP162Q5TB80 1403 aa6.61□□□□□ -1.35
PCDH9-203ENST00000456367 GOLGA6L22H0YM25 854 aa6.6□□□□□ -1.35
PCDH9-203ENST00000456367 PODXL2Q9NZ53 605 aa6.6□□□□□ -1.35
PCDH9-203ENST00000456367 GOLGA3Q08378 1498 aa6.59□□□□□ -1.35
PCDH9-203ENST00000456367 EIF4G2P78344 907 aaKnown RBP eCLIP6.59□□□□□ -1.359e-10■■■■■ 41.2
PCDH9-203ENST00000456367 IRX6P78412 446 aaPredicted RBP6.59□□□□□ -1.35
PCDH9-203ENST00000456367 CLIP1P30622 1438 aa6.59□□□□□ -1.36
PCDH9-203ENST00000456367 IPO9Q96P70 1041 aaKnown RBP6.58□□□□□ -1.36
PCDH9-203ENST00000456367 TCERG1O14776 1098 aaKnown RBP6.56□□□□□ -1.36
PCDH9-203ENST00000456367 TULP1O00294 542 aaPredicted RBP6.56□□□□□ -1.36
PCDH9-203ENST00000456367 PTMSP20962 102 aa6.56□□□□□ -1.36
PCDH9-203ENST00000456367 PNNQ9H307 717 aaKnown RBP6.56□□□□□ -1.36
PCDH9-203ENST00000456367 CDK11BP21127 795 aaKnown RBP6.55□□□□□ -1.36
PCDH9-203ENST00000456367 LAS1LQ9Y4W2 734 aaKnown RBP6.55□□□□□ -1.36
PCDH9-203ENST00000456367 ZNF326Q5BKZ1 582 aaKnown RBP6.54□□□□□ -1.36
PCDH9-203ENST00000456367 ARID4BQ4LE39 1312 aaPredicted RBP6.53□□□□□ -1.36
PCDH9-203ENST00000456367 B4GALNT3Q6L9W6 998 aa6.52□□□□□ -1.37
PCDH9-203ENST00000456367 CEP164Q9UPV0 1460 aa6.51□□□□□ -1.37
PCDH9-203ENST00000456367 HSP90AA2PQ14568 343 aaPredicted RBP6.51□□□□□ -1.37
PCDH9-203ENST00000456367 SLC4A1APQ9BWU0 796 aaKnown RBP6.51□□□□□ -1.37
PCDH9-203ENST00000456367 WDR43Q15061 677 aaKnown RBP eCLIP6.51□□□□□ -1.37
PCDH9-203ENST00000456367 MSNP26038 577 aaKnown RBP6.5□□□□□ -1.37
PCDH9-203ENST00000456367 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.49□□□□□ -1.37
PCDH9-203ENST00000456367 PTMAP06454 111 aaKnown RBP6.49□□□□□ -1.37
PCDH9-203ENST00000456367 WRNQ14191 1432 aaPredicted RBP eCLIP6.49□□□□□ -1.37
PCDH9-203ENST00000456367 RSF1Q96T23 1441 aaPredicted RBP6.49□□□□□ -1.37
PCDH9-203ENST00000456367 RB1CC1Q8TDY2 1594 aa6.48□□□□□ -1.37
PCDH9-203ENST00000456367 GSE1Q14687 1217 aa6.48□□□□□ -1.37
PCDH9-203ENST00000456367 DNTTIP2Q5QJE6 756 aaKnown RBP6.48□□□□□ -1.37
PCDH9-203ENST00000456367 CHAF1AQ13111 956 aaPredicted RBP6.47□□□□□ -1.37
PCDH9-203ENST00000456367 VSIG10Q8N0Z9 540 aa6.46□□□□□ -1.37
PCDH9-203ENST00000456367 GOLGA6L3A6NEY3 463 aa6.46□□□□□ -1.38
PCDH9-203ENST00000456367 CFAP44Q96MT7 982 aa6.46□□□□□ -1.38
PCDH9-203ENST00000456367 PLEKHG5O94827 1062 aa6.46□□□□□ -1.38
PCDH9-203ENST00000456367 MS4A1P11836 297 aa6.45□□□□□ -1.38
PCDH9-203ENST00000456367 CCNB3Q8WWL7 1395 aa6.45□□□□□ -1.38
PCDH9-203ENST00000456367 PKNOX2Q96KN3 472 aa6.45□□□□□ -1.38
PCDH9-203ENST00000456367 VPS8Q8N3P4 1428 aa6.44□□□□□ -1.38
PCDH9-203ENST00000456367 KLHL34Q8N239 644 aa6.44□□□□□ -1.38
PCDH9-203ENST00000456367 GBP4Q96PP9 640 aa6.44□□□□□ -1.38
PCDH9-203ENST00000456367 CHMP4BQ9H444 224 aaKnown RBP6.44□□□□□ -1.38
PCDH9-203ENST00000456367 MYH16Q9H6N6 1097 aa6.44□□□□□ -1.38
PCDH9-203ENST00000456367 MAP7D2Q96T17 732 aa6.44□□□□□ -1.38
PCDH9-203ENST00000456367 HSCBQ8IWL3 235 aa6.44□□□□□ -1.38
PCDH9-203ENST00000456367 SALL2Q9Y467 1007 aaPredicted RBP6.43□□□□□ -1.38
PCDH9-203ENST00000456367 NUDCQ9Y266 331 aa6.43□□□□□ -1.38
PCDH9-203ENST00000456367 PDE3BQ13370 1112 aa6.43□□□□□ -1.38
PCDH9-203ENST00000456367 C14orf37Q86TY3 774 aa6.43□□□□□ -1.38
PCDH9-203ENST00000456367 MTERF4Q7Z6M4 381 aaKnown RBP6.43□□□□□ -1.38
PCDH9-203ENST00000456367 HIRIP3Q9BW71 556 aaPredicted RBP6.43□□□□□ -1.38
PCDH9-203ENST00000456367 SETD5Q9C0A6 1442 aa6.42□□□□□ -1.38
PCDH9-203ENST00000456367 MTUS2Q5JR59 1369 aa6.42□□□□□ -1.38
PCDH9-203ENST00000456367 CDCA8Q53HL2 280 aa6.41□□□□□ -1.38
PCDH9-203ENST00000456367 CASC1Q6TDU7 716 aa6.41□□□□□ -1.38
PCDH9-203ENST00000456367 HSP90AB1P08238 724 aaKnown RBP6.41□□□□□ -1.38
PCDH9-203ENST00000456367 FAM43AQ8N2R8 423 aa6.41□□□□□ -1.38
PCDH9-203ENST00000456367 NRDCO43847 1150 aa6.4□□□□□ -1.38
PCDH9-203ENST00000456367 KIAA2012Q0VF49 1180 aa6.4□□□□□ -1.38
PCDH9-203ENST00000456367 GOLGA6L6A8MZA4 724 aa6.4□□□□□ -1.39
PCDH9-203ENST00000456367 UBE2Q2Q8WVN8 375 aa6.4□□□□□ -1.39
PCDH9-203ENST00000456367 SCRIBQ14160 1630 aa6.39□□□□□ -1.39
PCDH9-203ENST00000456367 DDX11L8A8MPP1 907 aa6.39□□□□□ -1.39
PCDH9-203ENST00000456367 RGS3P49796 1198 aa6.39□□□□□ -1.39
PCDH9-203ENST00000456367 ZBED9Q6R2W3 1325 aa6.39□□□□□ -1.39
PCDH9-203ENST00000456367 RCAN3Q9UKA8 241 aa6.39□□□□□ -1.39
PCDH9-203ENST00000456367 SKOR2Q2VWA4 1001 aaPredicted RBP6.39□□□□□ -1.39
PCDH9-203ENST00000456367 PPP1R15AO75807 674 aaPredicted RBP6.38□□□□□ -1.39
PCDH9-203ENST00000456367 TPRNQ4KMQ1 711 aa6.38□□□□□ -1.39
PCDH9-203ENST00000456367 ANO8Q9HCE9 1232 aaPredicted RBP6.38□□□□□ -1.39
PCDH9-203ENST00000456367 TPM2P07951 284 aa6.38□□□□□ -1.39
PCDH9-203ENST00000456367 PDE4AP27815 886 aa6.38□□□□□ -1.39
PCDH9-203ENST00000456367 SIN3AQ96ST3 1273 aa6.38□□□□□ -1.39
PCDH9-203ENST00000456367 RALBP1Q15311 655 aa6.37□□□□□ -1.39
PCDH9-203ENST00000456367 P3H3Q8IVL6 736 aa6.37□□□□□ -1.39
PCDH9-203ENST00000456367 FHAD1B1AJZ9 1412 aa6.37□□□□□ -1.39
PCDH9-203ENST00000456367 PHLDB1Q86UU1 1377 aa6.37□□□□□ -1.39
PCDH9-203ENST00000456367 RRP9O43818 475 aaKnown RBP6.37□□□□□ -1.39
PCDH9-203ENST00000456367 PDIA4P13667 645 aaKnown RBP6.37□□□□□ -1.39
PCDH9-203ENST00000456367 CSPP1Q1MSJ5 1256 aa6.37□□□□□ -1.39
PCDH9-203ENST00000456367 SYAP1Q96A49 352 aaPredicted RBP6.37□□□□□ -1.39
PCDH9-203ENST00000456367 DHX57Q6P158 1386 aaKnown RBP6.37□□□□□ -1.39
PCDH9-203ENST00000456367 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.37□□□□□ -1.39
PCDH9-203ENST00000456367 PDE4CQ08493 712 aa6.36□□□□□ -1.39
PCDH9-203ENST00000456367 FAM161AQ3B820 660 aa6.36□□□□□ -1.39
PCDH9-203ENST00000456367 ROCK2O75116 1388 aaKnown RBP6.36□□□□□ -1.39
PCDH9-203ENST00000456367 TNNT3P45378 269 aaPredicted RBP6.36□□□□□ -1.39
PCDH9-203ENST00000456367 ISY1Q9ULR0 285 aaKnown RBP6.36□□□□□ -1.39
PCDH9-203ENST00000456367 CENPQQ7L2Z9 268 aaPredicted RBP6.35□□□□□ -1.39
PCDH9-203ENST00000456367 FTSJ3Q8IY81 847 aaKnown RBP6.35□□□□□ -1.39
PCDH9-203ENST00000456367 CFAP53Q96M91 514 aa6.35□□□□□ -1.39
PCDH9-203ENST00000456367 ABCC9O60706 1549 aa6.35□□□□□ -1.39
PCDH9-203ENST00000456367 HSPA5P11021 654 aaKnown RBP6.35□□□□□ -1.39
PCDH9-203ENST00000456367 ZRSR1Q15695 479 aaKnown RBP6.35□□□□□ -1.39
PCDH9-203ENST00000456367 TAOK2Q9UL54 1235 aa6.35□□□□□ -1.39
PCDH9-203ENST00000456367 PMFBP1Q8TBY8 1022 aa6.34□□□□□ -1.39
PCDH9-203ENST00000456367 KNSTRNQ9Y448 316 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms