RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 THOC2Q8NI27 1593 aaKnown RBP6.5□□□□□ -1.37
DEPDC1-202ENST00000456315 MAPKBP1O60336 1514 aa6.5□□□□□ -1.37
DEPDC1-202ENST00000456315 CC2D2AQ9P2K1 1620 aa6.48□□□□□ -1.37
DEPDC1-202ENST00000456315 RAPGEF2Q9Y4G8 1499 aa6.48□□□□□ -1.37
DEPDC1-202ENST00000456315 BRPF3Q9ULD4 1205 aa6.46□□□□□ -1.38
DEPDC1-202ENST00000456315 VPS8Q8N3P4 1428 aa6.45□□□□□ -1.38
DEPDC1-202ENST00000456315 CLSPNQ9HAW4 1339 aa6.45□□□□□ -1.38
DEPDC1-202ENST00000456315 RAB3GAP2Q9H2M9 1393 aa6.43□□□□□ -1.38
DEPDC1-202ENST00000456315 HNRNPUQ00839 825 aaKnown RBP eCLIP6.42□□□□□ -1.38
DEPDC1-202ENST00000456315 ARAP1Q96P48 1450 aa6.42□□□□□ -1.38
DEPDC1-202ENST00000456315 KIF21BO75037 1637 aa6.41□□□□□ -1.38
DEPDC1-202ENST00000456315 DCAF11Q8TEB1 546 aa6.41□□□□□ -1.38
DEPDC1-202ENST00000456315 CENPFP49454 3210 aa6.41□□□□□ -1.38
DEPDC1-202ENST00000456315 UBE2Q2Q8WVN8 375 aa6.4□□□□□ -1.39
DEPDC1-202ENST00000456315 TIMELESSQ9UNS1 1208 aa6.4□□□□□ -1.39
DEPDC1-202ENST00000456315 WASHC2AQ641Q2 1341 aa6.39□□□□□ -1.39
DEPDC1-202ENST00000456315 AKNAQ7Z591 1439 aa6.38□□□□□ -1.39
DEPDC1-202ENST00000456315 PEG3Q9GZU2 1588 aa6.38□□□□□ -1.39
DEPDC1-202ENST00000456315 LAMA3Q16787 3333 aa6.37□□□□□ -1.39
DEPDC1-202ENST00000456315 GOLGA3Q08378 1498 aa6.37□□□□□ -1.39
DEPDC1-202ENST00000456315 KDM5BQ9UGL1 1544 aa6.37□□□□□ -1.39
DEPDC1-202ENST00000456315 SYNJ1O43426 1573 aa6.36□□□□□ -1.39
DEPDC1-202ENST00000456315 AQRO60306 1485 aaKnown RBP eCLIP6.36□□□□□ -1.39
DEPDC1-202ENST00000456315 NOP58Q9Y2X3 529 aaKnown RBP6.36□□□□□ -1.39
DEPDC1-202ENST00000456315 SLC4A3P48751 1232 aa6.35□□□□□ -1.39
DEPDC1-202ENST00000456315 LAS1LQ9Y4W2 734 aaKnown RBP6.35□□□□□ -1.39
DEPDC1-202ENST00000456315 RRBP1Q9P2E9 1410 aaKnown RBP6.35□□□□□ -1.39
DEPDC1-202ENST00000456315 SMARCA2P51531 1590 aa6.35□□□□□ -1.39
DEPDC1-202ENST00000456315 PHLDB1Q86UU1 1377 aa6.34□□□□□ -1.39
DEPDC1-202ENST00000456315 WASHC2CQ9Y4E1 1318 aa6.34□□□□□ -1.39
DEPDC1-202ENST00000456315 CCNB3Q8WWL7 1395 aa6.34□□□□□ -1.4
DEPDC1-202ENST00000456315 CCER2I3L3R5 266 aa6.34□□□□□ -1.4
DEPDC1-202ENST00000456315 PLEKHG5O94827 1062 aa6.34□□□□□ -1.4
DEPDC1-202ENST00000456315 CNGB1Q14028 1251 aaPredicted RBP6.34□□□□□ -1.4
DEPDC1-202ENST00000456315 CDK11AQ9UQ88 783 aaPredicted RBP6.33□□□□□ -1.4
DEPDC1-202ENST00000456315 DENND4BO75064 1496 aaPredicted RBP6.32□□□□□ -1.4
DEPDC1-202ENST00000456315 BAZ1AQ9NRL2 1556 aaPredicted RBP6.32□□□□□ -1.4
DEPDC1-202ENST00000456315 FAM9BQ8IZU0 186 aa6.32□□□□□ -1.4
DEPDC1-202ENST00000456315 PTPRKQ15262 1439 aa6.32□□□□□ -1.4
DEPDC1-202ENST00000456315 PPP4R2Q9NY27 417 aa6.31□□□□□ -1.4
DEPDC1-202ENST00000456315 NEFLP07196 543 aa6.31□□□□□ -1.4
DEPDC1-202ENST00000456315 IPO9Q96P70 1041 aaKnown RBP6.3□□□□□ -1.4
DEPDC1-202ENST00000456315 RNF123Q5XPI4 1314 aa6.3□□□□□ -1.4
DEPDC1-202ENST00000456315 PRKRIP1Q9H875 184 aaPredicted RBP6.29□□□□□ -1.4
DEPDC1-202ENST00000456315 CEP164Q9UPV0 1460 aa6.29□□□□□ -1.4
DEPDC1-202ENST00000456315 ANP32CO43423 234 aa6.29□□□□□ -1.4
DEPDC1-202ENST00000456315 EIF5BO60841 1220 aaKnown RBP6.28□□□□□ -1.4
DEPDC1-202ENST00000456315 RRAGDQ9NQL2 400 aaPredicted RBP6.28□□□□□ -1.4
DEPDC1-202ENST00000456315 FOXD1Q16676 465 aa6.28□□□□□ -1.4
DEPDC1-202ENST00000456315 NBPF8Q3BBV2 869 aa6.27□□□□□ -1.41
DEPDC1-202ENST00000456315 PRDM2Q13029 1718 aa6.27□□□□□ -1.41
DEPDC1-202ENST00000456315 ARHGAP35Q9NRY4 1499 aa6.27□□□□□ -1.41
DEPDC1-202ENST00000456315 PRXQ9BXM0 1461 aa6.27□□□□□ -1.41
DEPDC1-202ENST00000456315 EEA1Q15075 1411 aa6.26□□□□□ -1.41
DEPDC1-202ENST00000456315 NPM2Q86SE8 214 aaKnown RBP6.26□□□□□ -1.41
DEPDC1-202ENST00000456315 NEFMP07197 916 aa6.26□□□□□ -1.41
DEPDC1-202ENST00000456315 VCANP13611 3396 aa6.26□□□□□ -1.41
DEPDC1-202ENST00000456315 NCAPD3P42695 1498 aa6.25□□□□□ -1.41
DEPDC1-202ENST00000456315 FRAT1Q92837 279 aaPredicted RBP6.25□□□□□ -1.41
DEPDC1-202ENST00000456315 HMGXB3Q12766 1538 aa6.25□□□□□ -1.41
DEPDC1-202ENST00000456315 HSPA5P11021 654 aaKnown RBP6.25□□□□□ -1.41
DEPDC1-202ENST00000456315 ERICH6BQ5W0A0 696 aa6.25□□□□□ -1.41
DEPDC1-202ENST00000456315 ERICH6Q7L0X2 663 aa6.25□□□□□ -1.41
DEPDC1-202ENST00000456315 ZMYND15Q9H091 742 aa6.25□□□□□ -1.41
DEPDC1-202ENST00000456315 FRAT2O75474 233 aaPredicted RBP6.24□□□□□ -1.41
DEPDC1-202ENST00000456315 P3H3Q8IVL6 736 aa6.24□□□□□ -1.41
DEPDC1-202ENST00000456315 EXOC6Q8TAG9 804 aa6.24□□□□□ -1.41
DEPDC1-202ENST00000456315 BACH2Q9BYV9 841 aa6.23□□□□□ -1.41
DEPDC1-202ENST00000456315 SETD5Q9C0A6 1442 aa6.23□□□□□ -1.41
DEPDC1-202ENST00000456315 PLIN1O60240 522 aa6.23□□□□□ -1.41
DEPDC1-202ENST00000456315 NFKBIBQ15653 356 aa6.23□□□□□ -1.41
DEPDC1-202ENST00000456315 CDCA7LQ96GN5 454 aa6.23□□□□□ -1.41
DEPDC1-202ENST00000456315 C20orf194Q5TEA3 1177 aa6.23□□□□□ -1.41
DEPDC1-202ENST00000456315 TOP2AP11388 1531 aaKnown RBP6.22□□□□□ -1.41
DEPDC1-202ENST00000456315 MRS2Q9HD23 443 aa6.22□□□□□ -1.41
DEPDC1-202ENST00000456315 PDE4AP27815 886 aa6.22□□□□□ -1.41
DEPDC1-202ENST00000456315 ZBTB47Q9UFB7 747 aaPredicted RBP6.22□□□□□ -1.41
DEPDC1-202ENST00000456315 ZBED9Q6R2W3 1325 aa6.21□□□□□ -1.41
DEPDC1-202ENST00000456315 FAM50AQ14320 339 aaKnown RBP6.21□□□□□ -1.41
DEPDC1-202ENST00000456315 POGKQ9P215 609 aa6.21□□□□□ -1.41
DEPDC1-202ENST00000456315 LAMA2P24043 3122 aaKnown RBP6.21□□□□□ -1.42
DEPDC1-202ENST00000456315 PABPN1Q86U42 306 aaKnown RBP eCLIP6.21□□□□□ -1.42
DEPDC1-202ENST00000456315 PKNOX2Q96KN3 472 aa6.21□□□□□ -1.42
DEPDC1-202ENST00000456315 L3MBTL2Q969R5 705 aa6.2□□□□□ -1.42
DEPDC1-202ENST00000456315 PANK2Q9BZ23 570 aa6.2□□□□□ -1.42
DEPDC1-202ENST00000456315 USP19O94966 1318 aa6.19□□□□□ -1.42
DEPDC1-202ENST00000456315 DHX29Q7Z478 1369 aaKnown RBP6.19□□□□□ -1.42
DEPDC1-202ENST00000456315 SEC24BO95487 1268 aa6.19□□□□□ -1.42
DEPDC1-202ENST00000456315 PNISRQ8TF01 805 aaKnown RBP6.19□□□□□ -1.42
DEPDC1-202ENST00000456315 KIF7Q2M1P5 1343 aa6.19□□□□□ -1.42
DEPDC1-202ENST00000456315 SPATA31E1Q6ZUB1 1445 aa6.18□□□□□ -1.42
DEPDC1-202ENST00000456315 ERBB4Q15303 1308 aa6.18□□□□□ -1.42
DEPDC1-202ENST00000456315 GSE1Q14687 1217 aa6.18□□□□□ -1.42
DEPDC1-202ENST00000456315 XIRP2A4UGR9 3374 aa6.17□□□□□ -1.42
DEPDC1-202ENST00000456315 SMARCA4P51532 1647 aa6.17□□□□□ -1.42
DEPDC1-202ENST00000456315 WDR62O43379 1518 aa6.17□□□□□ -1.42
DEPDC1-202ENST00000456315 BRCA2P51587 3418 aa6.16□□□□□ -1.42
DEPDC1-202ENST00000456315 NAIPQ13075 1403 aa6.16□□□□□ -1.42
DEPDC1-202ENST00000456315 KDM6BO15054 1643 aa6.16□□□□□ -1.42
DEPDC1-202ENST00000456315 VSIG10Q8N0Z9 540 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms