RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 ADAMTS12P58397 1594 aa11.74□□□□□ -0.53
ERCC3-204ENST00000456257 PBRM1Q86U86 1689 aa11.73□□□□□ -0.53
ERCC3-204ENST00000456257 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
ERCC3-204ENST00000456257 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
ERCC3-204ENST00000456257 KIAA0586Q9BVV6 1533 aa11.7□□□□□ -0.54
ERCC3-204ENST00000456257 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
ERCC3-204ENST00000456257 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
ERCC3-204ENST00000456257 MAP3K1Q13233 1512 aa11.69□□□□□ -0.54
ERCC3-204ENST00000456257 GRIN2AQ12879 1464 aa11.69□□□□□ -0.54
ERCC3-204ENST00000456257 NUP160Q12769 1436 aa11.68□□□□□ -0.54
ERCC3-204ENST00000456257 UGGT2Q9NYU1 1516 aa11.66□□□□□ -0.54
ERCC3-204ENST00000456257 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
ERCC3-204ENST00000456257 CTTNBP2Q8WZ74 1663 aa11.65□□□□□ -0.54
ERCC3-204ENST00000456257 PCGF6Q9BYE7 350 aa11.65□□□□□ -0.54
ERCC3-204ENST00000456257 SAMD9Q5K651 1589 aa11.65□□□□□ -0.54
ERCC3-204ENST00000456257 FMN1Q68DA7 1419 aa11.62□□□□□ -0.55
ERCC3-204ENST00000456257 CASKIN1Q8WXD9 1431 aa11.62□□□□□ -0.55
ERCC3-204ENST00000456257 RANGAP1P46060 587 aaPredicted RBP11.62□□□□□ -0.55
ERCC3-204ENST00000456257 IQGAP2Q13576 1575 aa11.62□□□□□ -0.55
ERCC3-204ENST00000456257 APLP2Q06481 763 aa11.61□□□□□ -0.55
ERCC3-204ENST00000456257 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
ERCC3-204ENST00000456257 POTEDQ86YR6 584 aa11.58□□□□□ -0.56
ERCC3-204ENST00000456257 DISP1Q96F81 1524 aa11.58□□□□□ -0.56
ERCC3-204ENST00000456257 FHOD3Q2V2M9 1422 aa11.58□□□□□ -0.56
ERCC3-204ENST00000456257 CEP170Q5SW79 1584 aa11.58□□□□□ -0.56
ERCC3-204ENST00000456257 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
ERCC3-204ENST00000456257 KANK4Q5T7N3 995 aaPredicted RBP11.57□□□□□ -0.56
ERCC3-204ENST00000456257 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
ERCC3-204ENST00000456257 PPARGC1BQ86YN6 1023 aaKnown RBP11.56□□□□□ -0.56
ERCC3-204ENST00000456257 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
ERCC3-204ENST00000456257 FBLN2P98095 1184 aa11.53□□□□□ -0.56
ERCC3-204ENST00000456257 LRRC9Q6ZRR7 1453 aa11.51□□□□□ -0.57
ERCC3-204ENST00000456257 TIAM1Q13009 1591 aa11.51□□□□□ -0.57
ERCC3-204ENST00000456257 CARMIL2Q6F5E8 1435 aa11.51□□□□□ -0.57
ERCC3-204ENST00000456257 KIAA0556O60303 1618 aa11.49□□□□□ -0.57
ERCC3-204ENST00000456257 RRBP1Q9P2E9 1410 aaKnown RBP11.49□□□□□ -0.57
ERCC3-204ENST00000456257 PCF11O94913 1555 aaKnown RBP11.49□□□□□ -0.57
ERCC3-204ENST00000456257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.46□□□□□ -0.57
ERCC3-204ENST00000456257 SHROOM2Q13796 1616 aa11.46□□□□□ -0.58
ERCC3-204ENST00000456257 CCDC18Q5T9S5 1454 aa11.45□□□□□ -0.58
ERCC3-204ENST00000456257 PRG4Q92954 1404 aaPredicted RBP11.44□□□□□ -0.58
ERCC3-204ENST00000456257 CLASP1Q7Z460 1538 aa11.44□□□□□ -0.58
ERCC3-204ENST00000456257 CFAP43Q8NDM7 1665 aa11.43□□□□□ -0.58
ERCC3-204ENST00000456257 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
ERCC3-204ENST00000456257 HRCP23327 699 aa11.42□□□□□ -0.58
ERCC3-204ENST00000456257 CHD1O14646 1710 aa11.42□□□□□ -0.58
ERCC3-204ENST00000456257 ARHGEF11O15085 1522 aa11.41□□□□□ -0.58
ERCC3-204ENST00000456257 NUP153P49790 1475 aaKnown RBP11.41□□□□□ -0.58
ERCC3-204ENST00000456257 PTPRGP23470 1445 aa11.41□□□□□ -0.58
ERCC3-204ENST00000456257 ABCA8O94911 1581 aa11.41□□□□□ -0.58
ERCC3-204ENST00000456257 PHLDB1Q86UU1 1377 aa11.41□□□□□ -0.58
ERCC3-204ENST00000456257 CCNB3Q8WWL7 1395 aa11.41□□□□□ -0.58
ERCC3-204ENST00000456257 HECW1Q76N89 1606 aa11.39□□□□□ -0.59
ERCC3-204ENST00000456257 MTUS2Q5JR59 1369 aa11.39□□□□□ -0.59
ERCC3-204ENST00000456257 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
ERCC3-204ENST00000456257 ATP1B4Q9UN42 357 aaPredicted RBP11.38□□□□□ -0.59
ERCC3-204ENST00000456257 CDK11AQ9UQ88 783 aaPredicted RBP11.38□□□□□ -0.59
ERCC3-204ENST00000456257 LRRIQ1Q96JM4 1722 aa11.38□□□□□ -0.59
ERCC3-204ENST00000456257 TTBK1Q5TCY1 1321 aaPredicted RBP11.37□□□□□ -0.59
ERCC3-204ENST00000456257 RAPGEF6Q8TEU7 1601 aa11.37□□□□□ -0.59
ERCC3-204ENST00000456257 PLB1Q6P1J6 1458 aa11.37□□□□□ -0.59
ERCC3-204ENST00000456257 MAGI3Q5TCQ9 1506 aa11.36□□□□□ -0.59
ERCC3-204ENST00000456257 ATP10BO94823 1461 aa11.36□□□□□ -0.59
ERCC3-204ENST00000456257 EHBP1L1Q8N3D4 1523 aa11.35□□□□□ -0.59
ERCC3-204ENST00000456257 UACAQ9BZF9 1416 aa11.35□□□□□ -0.59
ERCC3-204ENST00000456257 UHRF1BP1LA0JNW5 1464 aa11.34□□□□□ -0.59
ERCC3-204ENST00000456257 NCOA2Q15596 1464 aa11.34□□□□□ -0.59
ERCC3-204ENST00000456257 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
ERCC3-204ENST00000456257 TROQ12816 1431 aaPredicted RBP11.33□□□□□ -0.6
ERCC3-204ENST00000456257 MYOM3Q5VTT5 1437 aa11.33□□□□□ -0.6
ERCC3-204ENST00000456257 FGD6Q6ZV73 1430 aa11.33□□□□□ -0.6
ERCC3-204ENST00000456257 MIA2Q96PC5 1412 aa11.33□□□□□ -0.6
ERCC3-204ENST00000456257 CDK13Q14004 1512 aaKnown RBP11.32□□□□□ -0.6
ERCC3-204ENST00000456257 TCOF1Q13428 1488 aaKnown RBP11.31□□□□□ -0.6
ERCC3-204ENST00000456257 ERCC6L2Q5T890 1561 aa11.3□□□□□ -0.6
ERCC3-204ENST00000456257 PLEKHD1A6NEE1 506 aa11.3□□□□□ -0.6
ERCC3-204ENST00000456257 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
ERCC3-204ENST00000456257 MSH5O43196 834 aa11.29□□□□□ -0.6
ERCC3-204ENST00000456257 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
ERCC3-204ENST00000456257 ABCC2Q92887 1545 aa11.27□□□□□ -0.61
ERCC3-204ENST00000456257 KDM5BQ9UGL1 1544 aa11.27□□□□□ -0.61
ERCC3-204ENST00000456257 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
ERCC3-204ENST00000456257 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
ERCC3-204ENST00000456257 ADCY10Q96PN6 1610 aa11.24□□□□□ -0.61
ERCC3-204ENST00000456257 GPATCH8Q9UKJ3 1502 aaKnown RBP11.24□□□□□ -0.61
ERCC3-204ENST00000456257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
ERCC3-204ENST00000456257 PTPRKQ15262 1439 aa11.23□□□□□ -0.61
ERCC3-204ENST00000456257 FAM50AQ14320 339 aaKnown RBP11.22□□□□□ -0.61
ERCC3-204ENST00000456257 SETD5Q9C0A6 1442 aa11.22□□□□□ -0.61
ERCC3-204ENST00000456257 AKNAQ7Z591 1439 aa11.2□□□□□ -0.62
ERCC3-204ENST00000456257 ACIN1Q9UKV3 1341 aaKnown RBP11.2□□□□□ -0.62
ERCC3-204ENST00000456257 ARID3CA6NKF2 412 aa11.2□□□□□ -0.62
ERCC3-204ENST00000456257 PIAS4Q8N2W9 510 aaPredicted RBP11.2□□□□□ -0.62
ERCC3-204ENST00000456257 PTPN23Q9H3S7 1636 aa11.2□□□□□ -0.62
ERCC3-204ENST00000456257 CCER1Q8TC90 406 aaPredicted RBP11.19□□□□□ -0.62
ERCC3-204ENST00000456257 HFM1A2PYH4 1435 aa11.18□□□□□ -0.62
ERCC3-204ENST00000456257 ROCK1Q13464 1354 aa11.18□□□□□ -0.62
ERCC3-204ENST00000456257 CFDP1Q9UEE9 299 aaPredicted RBP11.18□□□□□ -0.62
ERCC3-204ENST00000456257 RSPH4AQ5TD94 716 aa11.17□□□□□ -0.62
ERCC3-204ENST00000456257 ABCC5O15440 1437 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms