RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
LINC01563-201ENST00000456235 RAPGEF2Q9Y4G8 1499 aa23.61■■□□□ 1.37
LINC01563-201ENST00000456235 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
LINC01563-201ENST00000456235 CTTNBP2Q8WZ74 1663 aa23.54■■□□□ 1.36
LINC01563-201ENST00000456235 PRXQ9BXM0 1461 aa23.54■■□□□ 1.36
LINC01563-201ENST00000456235 KIAA0586Q9BVV6 1533 aa23.5■■□□□ 1.35
LINC01563-201ENST00000456235 IQGAP2Q13576 1575 aa23.5■■□□□ 1.35
LINC01563-201ENST00000456235 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
LINC01563-201ENST00000456235 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
LINC01563-201ENST00000456235 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
LINC01563-201ENST00000456235 CYB5RLQ6IPT4 315 aa23.49■■□□□ 1.35
LINC01563-201ENST00000456235 EEA1Q15075 1411 aa23.49■■□□□ 1.35
LINC01563-201ENST00000456235 JPH4Q96JJ6 628 aa23.44■■□□□ 1.34
LINC01563-201ENST00000456235 KIF21BO75037 1637 aa23.41■■□□□ 1.34
LINC01563-201ENST00000456235 TTBK1Q5TCY1 1321 aaPredicted RBP23.37■■□□□ 1.33
LINC01563-201ENST00000456235 KIAA0556O60303 1618 aa23.31■■□□□ 1.32
LINC01563-201ENST00000456235 DISP1Q96F81 1524 aa23.31■■□□□ 1.32
LINC01563-201ENST00000456235 UGGT2Q9NYU1 1516 aa23.31■■□□□ 1.32
LINC01563-201ENST00000456235 RANGAP1P46060 587 aaPredicted RBP23.3■■□□□ 1.32
LINC01563-201ENST00000456235 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
LINC01563-201ENST00000456235 CARMIL2Q6F5E8 1435 aa23.24■■□□□ 1.31
LINC01563-201ENST00000456235 ADCY10Q96PN6 1610 aa23.22■■□□□ 1.31
LINC01563-201ENST00000456235 P3H3Q8IVL6 736 aa23.18■■□□□ 1.3
LINC01563-201ENST00000456235 TNIKQ9UKE5 1360 aa23.17■■□□□ 1.3
LINC01563-201ENST00000456235 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
LINC01563-201ENST00000456235 SAMD9Q5K651 1589 aa23.17■■□□□ 1.3
LINC01563-201ENST00000456235 PTPRGP23470 1445 aa23.16■■□□□ 1.3
LINC01563-201ENST00000456235 FHOD3Q2V2M9 1422 aa23.08■■□□□ 1.28
LINC01563-201ENST00000456235 PLB1Q6P1J6 1458 aa23.06■■□□□ 1.28
LINC01563-201ENST00000456235 ABCC2Q92887 1545 aa23.03■■□□□ 1.28
LINC01563-201ENST00000456235 UACAQ9BZF9 1416 aa23.02■■□□□ 1.28
LINC01563-201ENST00000456235 TRHP20396 242 aaPredicted RBP23.02■■□□□ 1.28
LINC01563-201ENST00000456235 EFCAB5A4FU69 1503 aa23.01■■□□□ 1.27
LINC01563-201ENST00000456235 ABCA8O94911 1581 aa23■■□□□ 1.27
LINC01563-201ENST00000456235 ZCCHC11Q5TAX3 1644 aaKnown RBP23■■□□□ 1.27
LINC01563-201ENST00000456235 ARID3CA6NKF2 412 aa22.98■■□□□ 1.27
LINC01563-201ENST00000456235 ARHGAP35Q9NRY4 1499 aa22.97■■□□□ 1.27
LINC01563-201ENST00000456235 UHRF1BP1LA0JNW5 1464 aa22.96■■□□□ 1.27
LINC01563-201ENST00000456235 KIF13AQ9H1H9 1805 aa22.96■■□□□ 1.27
LINC01563-201ENST00000456235 RAPGEF6Q8TEU7 1601 aa22.95■■□□□ 1.26
LINC01563-201ENST00000456235 NPM1P06748 294 aaKnown RBP eCLIP22.93■■□□□ 1.26
LINC01563-201ENST00000456235 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
LINC01563-201ENST00000456235 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
LINC01563-201ENST00000456235 KDM5BQ9UGL1 1544 aa22.88■■□□□ 1.25
LINC01563-201ENST00000456235 DIP2BQ9P265 1576 aa22.88■■□□□ 1.25
LINC01563-201ENST00000456235 ASXL2Q76L83 1435 aa22.85■■□□□ 1.25
LINC01563-201ENST00000456235 CLIP1P30622 1438 aa22.83■■□□□ 1.25
LINC01563-201ENST00000456235 NUP153P49790 1475 aaKnown RBP22.83■■□□□ 1.25
LINC01563-201ENST00000456235 TSPOAP1O95153 1857 aa22.81■■□□□ 1.24
LINC01563-201ENST00000456235 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
LINC01563-201ENST00000456235 LRRIQ1Q96JM4 1722 aa22.8■■□□□ 1.24
LINC01563-201ENST00000456235 ABCC10Q5T3U5 1492 aa22.79■■□□□ 1.24
LINC01563-201ENST00000456235 CEP162Q5TB80 1403 aa22.79■■□□□ 1.24
LINC01563-201ENST00000456235 ATP10BO94823 1461 aa22.78■■□□□ 1.24
LINC01563-201ENST00000456235 CDK13Q14004 1512 aaKnown RBP22.77■■□□□ 1.24
LINC01563-201ENST00000456235 FAM69CQ0P6D2 419 aa22.76■■□□□ 1.23
LINC01563-201ENST00000456235 ATP1B4Q9UN42 357 aaPredicted RBP22.76■■□□□ 1.23
LINC01563-201ENST00000456235 HECW1Q76N89 1606 aa22.75■■□□□ 1.23
LINC01563-201ENST00000456235 WDR7Q9Y4E6 1490 aa22.74■■□□□ 1.23
LINC01563-201ENST00000456235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.74■■□□□ 1.23
LINC01563-201ENST00000456235 HNRNPUL2Q1KMD3 747 aaKnown RBP22.74■■□□□ 1.23
LINC01563-201ENST00000456235 FMN1Q68DA7 1419 aa22.74■■□□□ 1.23
LINC01563-201ENST00000456235 EPRSP07814 1512 aaKnown RBP22.72■■□□□ 1.23
LINC01563-201ENST00000456235 PPRC1Q5VV67 1664 aaKnown RBP22.68■■□□□ 1.22
LINC01563-201ENST00000456235 KCNH8Q96L42 1107 aa22.67■■□□□ 1.22
LINC01563-201ENST00000456235 MAP3K4Q9Y6R4 1608 aa22.66■■□□□ 1.22
LINC01563-201ENST00000456235 GLI2P10070 1586 aa22.65■■□□□ 1.22
LINC01563-201ENST00000456235 CASKIN1Q8WXD9 1431 aa22.61■■□□□ 1.21
LINC01563-201ENST00000456235 FYCO1Q9BQS8 1478 aa22.59■■□□□ 1.21
LINC01563-201ENST00000456235 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.21
LINC01563-201ENST00000456235 KIF14Q15058 1648 aa22.56■■□□□ 1.2
LINC01563-201ENST00000456235 TTC37Q6PGP7 1564 aa22.55■■□□□ 1.2
LINC01563-201ENST00000456235 ABCA9Q8IUA7 1624 aa22.54■■□□□ 1.2
LINC01563-201ENST00000456235 MAGI3Q5TCQ9 1506 aa22.53■■□□□ 1.2
LINC01563-201ENST00000456235 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
LINC01563-201ENST00000456235 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
LINC01563-201ENST00000456235 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.5■■□□□ 1.19
LINC01563-201ENST00000456235 CD109Q6YHK3 1445 aa22.49■■□□□ 1.19
LINC01563-201ENST00000456235 KDM6BO15054 1643 aa22.49■■□□□ 1.19
LINC01563-201ENST00000456235 VPS8Q8N3P4 1428 aa22.46■■□□□ 1.19
LINC01563-201ENST00000456235 TROQ12816 1431 aaPredicted RBP22.43■■□□□ 1.18
LINC01563-201ENST00000456235 TEX14Q8IWB6 1497 aa22.41■■□□□ 1.18
LINC01563-201ENST00000456235 MYO5CQ9NQX4 1742 aa22.41■■□□□ 1.18
LINC01563-201ENST00000456235 COL17A1Q9UMD9 1497 aaPredicted RBP22.38■■□□□ 1.17
LINC01563-201ENST00000456235 CDK11AQ9UQ88 783 aaPredicted RBP22.37■■□□□ 1.17
LINC01563-201ENST00000456235 TIAM1Q13009 1591 aa22.37■■□□□ 1.17
LINC01563-201ENST00000456235 CDC42BPAQ5VT25 1732 aa22.33■■□□□ 1.17
LINC01563-201ENST00000456235 CDC42BPBQ9Y5S2 1711 aa22.32■■□□□ 1.16
LINC01563-201ENST00000456235 EHBP1L1Q8N3D4 1523 aa22.31■■□□□ 1.16
LINC01563-201ENST00000456235 PREX2Q70Z35 1606 aa22.31■■□□□ 1.16
LINC01563-201ENST00000456235 FANCAO15360 1455 aa22.3■■□□□ 1.16
LINC01563-201ENST00000456235 MTUS2Q5JR59 1369 aa22.3■■□□□ 1.16
LINC01563-201ENST00000456235 ARHGAP5Q13017 1502 aa22.29■■□□□ 1.16
LINC01563-201ENST00000456235 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
LINC01563-201ENST00000456235 FRMPD1Q5SYB0 1578 aa22.25■■□□□ 1.15
LINC01563-201ENST00000456235 PLCH2O75038 1416 aa22.25■■□□□ 1.15
LINC01563-201ENST00000456235 NEO1Q92859 1461 aa22.25■■□□□ 1.15
LINC01563-201ENST00000456235 SUPT6HQ7KZ85 1726 aaKnown RBP22.24■■□□□ 1.15
LINC01563-201ENST00000456235 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
LINC01563-201ENST00000456235 KANK4Q5T7N3 995 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms