RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 JPH4Q96JJ6 628 aa30.41■■■□□ 2.46
COL13A1-206ENST00000456019 TRHP20396 242 aaPredicted RBP30.4■■■□□ 2.46
COL13A1-206ENST00000456019 PRG4Q92954 1404 aaPredicted RBP30.39■■■□□ 2.45
COL13A1-206ENST00000456019 CARMIL1Q5VZK9 1371 aa30.37■■■□□ 2.45
COL13A1-206ENST00000456019 KIAA0586Q9BVV6 1533 aa30.33■■■□□ 2.45
COL13A1-206ENST00000456019 RAPGEF2Q9Y4G8 1499 aa30.15■■■□□ 2.42
COL13A1-206ENST00000456019 IQGAP2Q13576 1575 aa30.09■■■□□ 2.41
COL13A1-206ENST00000456019 CARMIL2Q6F5E8 1435 aa30.04■■■□□ 2.4
COL13A1-206ENST00000456019 NPM1P06748 294 aaKnown RBP eCLIP29.98■■■□□ 2.39
COL13A1-206ENST00000456019 PTPRGP23470 1445 aa29.97■■■□□ 2.39
COL13A1-206ENST00000456019 ADCY10Q96PN6 1610 aa29.96■■■□□ 2.39
COL13A1-206ENST00000456019 TNIKQ9UKE5 1360 aa29.96■■■□□ 2.39
COL13A1-206ENST00000456019 PRXQ9BXM0 1461 aa29.92■■■□□ 2.38
COL13A1-206ENST00000456019 UGGT2Q9NYU1 1516 aa29.91■■■□□ 2.38
COL13A1-206ENST00000456019 DISP1Q96F81 1524 aa29.91■■■□□ 2.38
COL13A1-206ENST00000456019 CHIC1Q5VXU3 224 aa29.89■■■□□ 2.38
COL13A1-206ENST00000456019 TTBK1Q5TCY1 1321 aaPredicted RBP29.89■■■□□ 2.38
COL13A1-206ENST00000456019 MAPKBP1O60336 1514 aa29.88■■■□□ 2.37
COL13A1-206ENST00000456019 CTTNBP2Q8WZ74 1663 aa29.85■■■□□ 2.37
COL13A1-206ENST00000456019 KIF13AQ9H1H9 1805 aa29.82■■■□□ 2.36
COL13A1-206ENST00000456019 CSRNP3Q8WYN3 585 aa29.8■■■□□ 2.36
COL13A1-206ENST00000456019 KIAA0556O60303 1618 aa29.8■■■□□ 2.36
COL13A1-206ENST00000456019 ABCC10Q5T3U5 1492 aa29.8■■■□□ 2.36
COL13A1-206ENST00000456019 EEA1Q15075 1411 aa29.78■■■□□ 2.36
COL13A1-206ENST00000456019 ABCC2Q92887 1545 aa29.76■■■□□ 2.36
COL13A1-206ENST00000456019 UHRF1BP1LA0JNW5 1464 aa29.76■■■□□ 2.35
COL13A1-206ENST00000456019 FAM69CQ0P6D2 419 aa29.76■■■□□ 2.35
COL13A1-206ENST00000456019 UACAQ9BZF9 1416 aa29.76■■■□□ 2.35
COL13A1-206ENST00000456019 GOLGA3Q08378 1498 aa29.74■■■□□ 2.35
COL13A1-206ENST00000456019 DIP2BQ9P265 1576 aa29.72■■■□□ 2.35
COL13A1-206ENST00000456019 PLB1Q6P1J6 1458 aa29.61■■■□□ 2.33
COL13A1-206ENST00000456019 KDM5BQ9UGL1 1544 aa29.61■■■□□ 2.33
COL13A1-206ENST00000456019 ASXL2Q76L83 1435 aa29.61■■■□□ 2.33
COL13A1-206ENST00000456019 FAM9AQ8IZU1 332 aaPredicted RBP29.59■■■□□ 2.33
COL13A1-206ENST00000456019 ZCCHC11Q5TAX3 1644 aaKnown RBP29.53■■■□□ 2.32
COL13A1-206ENST00000456019 ABCA8O94911 1581 aa29.51■■■□□ 2.31
COL13A1-206ENST00000456019 GLI2P10070 1586 aa29.49■■■□□ 2.31
COL13A1-206ENST00000456019 KIF21BO75037 1637 aa29.47■■■□□ 2.31
COL13A1-206ENST00000456019 P3H3Q8IVL6 736 aa29.47■■■□□ 2.31
COL13A1-206ENST00000456019 SAMD9Q5K651 1589 aa29.46■■■□□ 2.31
COL13A1-206ENST00000456019 TSPOAP1O95153 1857 aa29.45■■■□□ 2.31
COL13A1-206ENST00000456019 EPRSP07814 1512 aaKnown RBP29.44■■■□□ 2.3
COL13A1-206ENST00000456019 WDR7Q9Y4E6 1490 aa29.4■■■□□ 2.3
COL13A1-206ENST00000456019 KDM6BO15054 1643 aa29.37■■■□□ 2.29
COL13A1-206ENST00000456019 RANGAP1P46060 587 aaPredicted RBP29.35■■■□□ 2.29
COL13A1-206ENST00000456019 MAP3K4Q9Y6R4 1608 aa29.33■■■□□ 2.29
COL13A1-206ENST00000456019 PPRC1Q5VV67 1664 aaKnown RBP29.32■■■□□ 2.28
COL13A1-206ENST00000456019 FHOD3Q2V2M9 1422 aa29.28■■■□□ 2.28
COL13A1-206ENST00000456019 EFCAB5A4FU69 1503 aa29.27■■■□□ 2.28
COL13A1-206ENST00000456019 RAPGEF6Q8TEU7 1601 aa29.27■■■□□ 2.28
COL13A1-206ENST00000456019 ATP10BO94823 1461 aa29.26■■■□□ 2.27
COL13A1-206ENST00000456019 TEX14Q8IWB6 1497 aa29.26■■■□□ 2.27
COL13A1-206ENST00000456019 ARID3CA6NKF2 412 aa29.25■■■□□ 2.27
COL13A1-206ENST00000456019 UBTFP17480 764 aaKnown RBP29.25■■■□□ 2.27
COL13A1-206ENST00000456019 KCNH8Q96L42 1107 aa29.24■■■□□ 2.27
COL13A1-206ENST00000456019 EHMT2Q96KQ7 1210 aa29.23■■■□□ 2.27
COL13A1-206ENST00000456019 CD109Q6YHK3 1445 aa29.18■■■□□ 2.26
COL13A1-206ENST00000456019 CFAP43Q8NDM7 1665 aa29.18■■■□□ 2.26
COL13A1-206ENST00000456019 NUP153P49790 1475 aaKnown RBP29.16■■■□□ 2.26
COL13A1-206ENST00000456019 MAGI3Q5TCQ9 1506 aa29.14■■■□□ 2.25
COL13A1-206ENST00000456019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.13■■■□□ 2.25
COL13A1-206ENST00000456019 HNRNPUL2Q1KMD3 747 aaKnown RBP29.13■■■□□ 2.25
COL13A1-206ENST00000456019 COL17A1Q9UMD9 1497 aaPredicted RBP29.1■■■□□ 2.25
COL13A1-206ENST00000456019 ARHGAP35Q9NRY4 1499 aa29.04■■■□□ 2.24
COL13A1-206ENST00000456019 ABCA9Q8IUA7 1624 aa29.03■■■□□ 2.24
COL13A1-206ENST00000456019 FMN1Q68DA7 1419 aa29.02■■■□□ 2.24
COL13A1-206ENST00000456019 PLEKHD1A6NEE1 506 aa29■■■□□ 2.23
COL13A1-206ENST00000456019 PHLDB1Q86UU1 1377 aa28.91■■■□□ 2.22
COL13A1-206ENST00000456019 HECW1Q76N89 1606 aa28.91■■■□□ 2.22
COL13A1-206ENST00000456019 CDK13Q14004 1512 aaKnown RBP28.9■■■□□ 2.22
COL13A1-206ENST00000456019 ARAP3Q8WWN8 1544 aa28.9■■■□□ 2.22
COL13A1-206ENST00000456019 KDM4FA0A1W2PPD8 638 aa28.89■■■□□ 2.22
COL13A1-206ENST00000456019 ATP1B4Q9UN42 357 aaPredicted RBP28.89■■■□□ 2.22
COL13A1-206ENST00000456019 NEO1Q92859 1461 aa28.86■■■□□ 2.21
COL13A1-206ENST00000456019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.82■■■□□ 2.2
COL13A1-206ENST00000456019 CDK11AQ9UQ88 783 aaPredicted RBP28.8■■■□□ 2.2
COL13A1-206ENST00000456019 ADGRL1O94910 1474 aa28.77■■■□□ 2.2
COL13A1-206ENST00000456019 TTC37Q6PGP7 1564 aa28.76■■■□□ 2.19
COL13A1-206ENST00000456019 CLIP1P30622 1438 aa28.74■■■□□ 2.19
COL13A1-206ENST00000456019 CFAP74Q9C0B2 1584 aa28.73■■■□□ 2.19
COL13A1-206ENST00000456019 FANCAO15360 1455 aa28.72■■■□□ 2.19
COL13A1-206ENST00000456019 CASKIN1Q8WXD9 1431 aa28.72■■■□□ 2.19
COL13A1-206ENST00000456019 RAPGEF3O95398 923 aa28.72■■■□□ 2.19
COL13A1-206ENST00000456019 AKNAQ7Z591 1439 aa28.7■■■□□ 2.19
COL13A1-206ENST00000456019 PCF11O94913 1555 aaKnown RBP28.7■■■□□ 2.18
COL13A1-206ENST00000456019 TROQ12816 1431 aaPredicted RBP28.69■■■□□ 2.18
COL13A1-206ENST00000456019 LRRIQ1Q96JM4 1722 aa28.68■■■□□ 2.18
COL13A1-206ENST00000456019 CCDC18Q5T9S5 1454 aa28.67■■■□□ 2.18
COL13A1-206ENST00000456019 PLCH2O75038 1416 aa28.66■■■□□ 2.18
COL13A1-206ENST00000456019 FRMPD1Q5SYB0 1578 aa28.66■■■□□ 2.18
COL13A1-206ENST00000456019 DENND4BO75064 1496 aaPredicted RBP28.66■■■□□ 2.18
COL13A1-206ENST00000456019 KIF14Q15058 1648 aa28.65■■■□□ 2.18
COL13A1-206ENST00000456019 FYCO1Q9BQS8 1478 aa28.64■■■□□ 2.17
COL13A1-206ENST00000456019 MYO5CQ9NQX4 1742 aa28.59■■■□□ 2.17
COL13A1-206ENST00000456019 RICTORQ6R327 1708 aa28.58■■■□□ 2.17
COL13A1-206ENST00000456019 EFCAB2Q5VUJ9 269 aa28.56■■■□□ 2.16
COL13A1-206ENST00000456019 SCAPERQ9BY12 1400 aa28.52■■■□□ 2.16
COL13A1-206ENST00000456019 ZMYM4Q5VZL5 1548 aa28.51■■■□□ 2.15
COL13A1-206ENST00000456019 ARHGEF40Q8TER5 1519 aa28.51■■■□□ 2.15
COL13A1-206ENST00000456019 CEP162Q5TB80 1403 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms