RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 ARAP1Q96P48 1450 aa25.51■■□□□ 1.67
TMEM220-202ENST00000455996 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
TMEM220-202ENST00000455996 VPS8Q8N3P4 1428 aa25.5■■□□□ 1.67
TMEM220-202ENST00000455996 EFCAB5A4FU69 1503 aa25.45■■□□□ 1.66
TMEM220-202ENST00000455996 RANGAP1P46060 587 aaPredicted RBP25.43■■□□□ 1.66
TMEM220-202ENST00000455996 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.66
TMEM220-202ENST00000455996 KIAA0586Q9BVV6 1533 aa25.39■■□□□ 1.65
TMEM220-202ENST00000455996 IQGAP2Q13576 1575 aa25.38■■□□□ 1.65
TMEM220-202ENST00000455996 NUP160Q12769 1436 aa25.37■■□□□ 1.65
TMEM220-202ENST00000455996 SAMD9Q5K651 1589 aa25.37■■□□□ 1.65
TMEM220-202ENST00000455996 CEP170Q5SW79 1584 aa25.32■■□□□ 1.64
TMEM220-202ENST00000455996 UGGT2Q9NYU1 1516 aa25.32■■□□□ 1.64
TMEM220-202ENST00000455996 FBLN2P98095 1184 aa25.26■■□□□ 1.63
TMEM220-202ENST00000455996 FHOD3Q2V2M9 1422 aa25.25■■□□□ 1.63
TMEM220-202ENST00000455996 FMN1Q68DA7 1419 aa25.19■■□□□ 1.62
TMEM220-202ENST00000455996 CHD1O14646 1710 aa25.19■■□□□ 1.62
TMEM220-202ENST00000455996 P3H3Q8IVL6 736 aa25.19■■□□□ 1.62
TMEM220-202ENST00000455996 TRIM26Q12899 539 aaPredicted RBP25.17■■□□□ 1.62
TMEM220-202ENST00000455996 DISP1Q96F81 1524 aa25.16■■□□□ 1.62
TMEM220-202ENST00000455996 MAP3K1Q13233 1512 aa25.15■■□□□ 1.62
TMEM220-202ENST00000455996 CASKIN1Q8WXD9 1431 aa25.15■■□□□ 1.62
TMEM220-202ENST00000455996 FYCO1Q9BQS8 1478 aa25.14■■□□□ 1.61
TMEM220-202ENST00000455996 APLP2Q06481 763 aa25.13■■□□□ 1.61
TMEM220-202ENST00000455996 KIAA0556O60303 1618 aa25.13■■□□□ 1.61
TMEM220-202ENST00000455996 PCF11O94913 1555 aaKnown RBP25.11■■□□□ 1.61
TMEM220-202ENST00000455996 JPH4Q96JJ6 628 aa25.11■■□□□ 1.61
TMEM220-202ENST00000455996 PPARGC1BQ86YN6 1023 aaKnown RBP25.1■■□□□ 1.61
TMEM220-202ENST00000455996 CARMIL2Q6F5E8 1435 aa25.04■■□□□ 1.6
TMEM220-202ENST00000455996 TIAM1Q13009 1591 aa25.03■■□□□ 1.6
TMEM220-202ENST00000455996 PCGF6Q9BYE7 350 aa25.03■■□□□ 1.6
TMEM220-202ENST00000455996 SHROOM2Q13796 1616 aa25.02■■□□□ 1.6
TMEM220-202ENST00000455996 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
TMEM220-202ENST00000455996 CFAP43Q8NDM7 1665 aa24.99■■□□□ 1.59
TMEM220-202ENST00000455996 KANK4Q5T7N3 995 aaPredicted RBP24.96■■□□□ 1.59
TMEM220-202ENST00000455996 PRG4Q92954 1404 aaPredicted RBP24.95■■□□□ 1.58
TMEM220-202ENST00000455996 LRRC9Q6ZRR7 1453 aa24.93■■□□□ 1.58
TMEM220-202ENST00000455996 HECW1Q76N89 1606 aa24.92■■□□□ 1.58
TMEM220-202ENST00000455996 CCDC18Q5T9S5 1454 aa24.9■■□□□ 1.58
TMEM220-202ENST00000455996 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
TMEM220-202ENST00000455996 LRRIQ1Q96JM4 1722 aa24.87■■□□□ 1.57
TMEM220-202ENST00000455996 ATP1B4Q9UN42 357 aaPredicted RBP24.86■■□□□ 1.57
TMEM220-202ENST00000455996 RAPGEF6Q8TEU7 1601 aa24.85■■□□□ 1.57
TMEM220-202ENST00000455996 EPRSP07814 1512 aaKnown RBP24.84■■□□□ 1.57
TMEM220-202ENST00000455996 NUP153P49790 1475 aaKnown RBP24.82■■□□□ 1.56
TMEM220-202ENST00000455996 ABCA8O94911 1581 aa24.81■■□□□ 1.56
TMEM220-202ENST00000455996 PTPRGP23470 1445 aa24.79■■□□□ 1.56
TMEM220-202ENST00000455996 PLB1Q6P1J6 1458 aa24.79■■□□□ 1.56
TMEM220-202ENST00000455996 OSCARQ8IYS5 282 aa24.77■■□□□ 1.56
TMEM220-202ENST00000455996 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
TMEM220-202ENST00000455996 EHBP1L1Q8N3D4 1523 aa24.75■■□□□ 1.55
TMEM220-202ENST00000455996 RRBP1Q9P2E9 1410 aaKnown RBP24.75■■□□□ 1.55
TMEM220-202ENST00000455996 CDK13Q14004 1512 aaKnown RBP24.74■■□□□ 1.55
TMEM220-202ENST00000455996 MTUS2Q5JR59 1369 aa24.73■■□□□ 1.55
TMEM220-202ENST00000455996 MAGI3Q5TCQ9 1506 aa24.72■■□□□ 1.55
TMEM220-202ENST00000455996 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
TMEM220-202ENST00000455996 UACAQ9BZF9 1416 aa24.67■■□□□ 1.54
TMEM220-202ENST00000455996 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
TMEM220-202ENST00000455996 NCOA2Q15596 1464 aa24.63■■□□□ 1.53
TMEM220-202ENST00000455996 SUPT6HQ7KZ85 1726 aaKnown RBP24.63■■□□□ 1.53
TMEM220-202ENST00000455996 ATP10BO94823 1461 aa24.63■■□□□ 1.53
TMEM220-202ENST00000455996 CCNB3Q8WWL7 1395 aa24.62■■□□□ 1.53
TMEM220-202ENST00000455996 CDK11AQ9UQ88 783 aaPredicted RBP24.62■■□□□ 1.53
TMEM220-202ENST00000455996 ABCC2Q92887 1545 aa24.6■■□□□ 1.53
TMEM220-202ENST00000455996 UHRF1BP1LA0JNW5 1464 aa24.6■■□□□ 1.53
TMEM220-202ENST00000455996 TROQ12816 1431 aaPredicted RBP24.58■■□□□ 1.52
TMEM220-202ENST00000455996 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
TMEM220-202ENST00000455996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.56■■□□□ 1.52
TMEM220-202ENST00000455996 MYOM3Q5VTT5 1437 aa24.54■■□□□ 1.52
TMEM220-202ENST00000455996 FGD6Q6ZV73 1430 aa24.52■■□□□ 1.52
TMEM220-202ENST00000455996 ADCY10Q96PN6 1610 aa24.51■■□□□ 1.51
TMEM220-202ENST00000455996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
TMEM220-202ENST00000455996 HNRNPUL2Q1KMD3 747 aaKnown RBP24.5■■□□□ 1.51
TMEM220-202ENST00000455996 KDM5BQ9UGL1 1544 aa24.48■■□□□ 1.51
TMEM220-202ENST00000455996 PLEKHD1A6NEE1 506 aa24.47■■□□□ 1.51
TMEM220-202ENST00000455996 MIA2Q96PC5 1412 aa24.45■■□□□ 1.5
TMEM220-202ENST00000455996 TCOF1Q13428 1488 aaKnown RBP24.43■■□□□ 1.5
TMEM220-202ENST00000455996 KIF14Q15058 1648 aa24.4■■□□□ 1.5
TMEM220-202ENST00000455996 ABCC10Q5T3U5 1492 aa24.39■■□□□ 1.5
TMEM220-202ENST00000455996 ZCCHC11Q5TAX3 1644 aaKnown RBP24.39■■□□□ 1.49
TMEM220-202ENST00000455996 PTPN23Q9H3S7 1636 aa24.37■■□□□ 1.49
TMEM220-202ENST00000455996 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
TMEM220-202ENST00000455996 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
TMEM220-202ENST00000455996 ITSN2Q9NZM3 1697 aa24.31■■□□□ 1.48
TMEM220-202ENST00000455996 HRCP23327 699 aa24.29■■□□□ 1.48
TMEM220-202ENST00000455996 CDC42BPAQ5VT25 1732 aa24.24■■□□□ 1.47
TMEM220-202ENST00000455996 PTPRKQ15262 1439 aa24.23■■□□□ 1.47
TMEM220-202ENST00000455996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.23■■□□□ 1.47
TMEM220-202ENST00000455996 ITGAEP38570 1179 aa24.23■■□□□ 1.47
TMEM220-202ENST00000455996 CFDP1Q9UEE9 299 aaPredicted RBP24.23■■□□□ 1.47
TMEM220-202ENST00000455996 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
TMEM220-202ENST00000455996 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
TMEM220-202ENST00000455996 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
TMEM220-202ENST00000455996 WDR7Q9Y4E6 1490 aa24.22■■□□□ 1.47
TMEM220-202ENST00000455996 CAMSAP2Q08AD1 1489 aa24.19■■□□□ 1.46
TMEM220-202ENST00000455996 TTC37Q6PGP7 1564 aa24.18■■□□□ 1.46
TMEM220-202ENST00000455996 PREX2Q70Z35 1606 aa24.18■■□□□ 1.46
TMEM220-202ENST00000455996 SETD5Q9C0A6 1442 aa24.17■■□□□ 1.46
TMEM220-202ENST00000455996 ZNF644Q9H582 1327 aaPredicted RBP24.17■■□□□ 1.46
TMEM220-202ENST00000455996 ASXL2Q76L83 1435 aa24.16■■□□□ 1.46
TMEM220-202ENST00000455996 DNMT1P26358 1616 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms