RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
CHCHD4P3-201ENST00000455954 IGF1RP08069 1367 aa15.65■□□□□ 0.1
CHCHD4P3-201ENST00000455954 CEP170Q5SW79 1584 aa15.64■□□□□ 0.09
CHCHD4P3-201ENST00000455954 CUL7Q14999 1698 aa15.58■□□□□ 0.08
CHCHD4P3-201ENST00000455954 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
CHCHD4P3-201ENST00000455954 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
CHCHD4P3-201ENST00000455954 JPH4Q96JJ6 628 aa15.54■□□□□ 0.08
CHCHD4P3-201ENST00000455954 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
CHCHD4P3-201ENST00000455954 RUSC2Q8N2Y8 1516 aa15.51■□□□□ 0.07
CHCHD4P3-201ENST00000455954 PRG4Q92954 1404 aaPredicted RBP15.51■□□□□ 0.07
CHCHD4P3-201ENST00000455954 KIAA0586Q9BVV6 1533 aa15.5■□□□□ 0.07
CHCHD4P3-201ENST00000455954 RAPGEF2Q9Y4G8 1499 aa15.45■□□□□ 0.06
CHCHD4P3-201ENST00000455954 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
CHCHD4P3-201ENST00000455954 IQGAP2Q13576 1575 aa15.37■□□□□ 0.05
CHCHD4P3-201ENST00000455954 CARMIL2Q6F5E8 1435 aa15.35■□□□□ 0.05
CHCHD4P3-201ENST00000455954 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
CHCHD4P3-201ENST00000455954 PRXQ9BXM0 1461 aa15.34■□□□□ 0.05
CHCHD4P3-201ENST00000455954 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
CHCHD4P3-201ENST00000455954 PTPRGP23470 1445 aa15.32■□□□□ 0.04
CHCHD4P3-201ENST00000455954 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHCHD4P3-201ENST00000455954 TNIKQ9UKE5 1360 aa15.31■□□□□ 0.04
CHCHD4P3-201ENST00000455954 EEA1Q15075 1411 aa15.31■□□□□ 0.04
CHCHD4P3-201ENST00000455954 UGGT2Q9NYU1 1516 aa15.29■□□□□ 0.04
CHCHD4P3-201ENST00000455954 DISP1Q96F81 1524 aa15.28■□□□□ 0.04
CHCHD4P3-201ENST00000455954 MYT1Q01538 1121 aa15.28■□□□□ 0.04
CHCHD4P3-201ENST00000455954 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.04
CHCHD4P3-201ENST00000455954 CTTNBP2Q8WZ74 1663 aa15.26■□□□□ 0.03
CHCHD4P3-201ENST00000455954 ADCY10Q96PN6 1610 aa15.25■□□□□ 0.03
CHCHD4P3-201ENST00000455954 FAM9AQ8IZU1 332 aaPredicted RBP15.23■□□□□ 0.03
CHCHD4P3-201ENST00000455954 KIAA0556O60303 1618 aa15.22■□□□□ 0.03
CHCHD4P3-201ENST00000455954 GOLGA3Q08378 1498 aa15.21■□□□□ 0.03
CHCHD4P3-201ENST00000455954 ACIN1Q9UKV3 1341 aaKnown RBP15.21■□□□□ 0.03
CHCHD4P3-201ENST00000455954 MAPKBP1O60336 1514 aa15.21■□□□□ 0.03
CHCHD4P3-201ENST00000455954 UACAQ9BZF9 1416 aa15.2■□□□□ 0.02
CHCHD4P3-201ENST00000455954 UHRF1BP1LA0JNW5 1464 aa15.19■□□□□ 0.02
CHCHD4P3-201ENST00000455954 ABCC2Q92887 1545 aa15.17■□□□□ 0.02
CHCHD4P3-201ENST00000455954 ABCC10Q5T3U5 1492 aa15.16■□□□□ 0.02
CHCHD4P3-201ENST00000455954 CENPBP07199 599 aaPredicted RBP15.16■□□□□ 0.02
CHCHD4P3-201ENST00000455954 FAM69CQ0P6D2 419 aa15.16■□□□□ 0.02
CHCHD4P3-201ENST00000455954 KIF13AQ9H1H9 1805 aa15.14■□□□□ 0.01
CHCHD4P3-201ENST00000455954 KIF21BO75037 1637 aa15.14■□□□□ 0.01
CHCHD4P3-201ENST00000455954 KDM5BQ9UGL1 1544 aa15.12■□□□□ 0.01
CHCHD4P3-201ENST00000455954 DIP2BQ9P265 1576 aa15.11■□□□□ 0.01
CHCHD4P3-201ENST00000455954 CCER1Q8TC90 406 aaPredicted RBP15.11■□□□□ 0.01
CHCHD4P3-201ENST00000455954 PLB1Q6P1J6 1458 aa15.1■□□□□ 0.01
CHCHD4P3-201ENST00000455954 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
CHCHD4P3-201ENST00000455954 ASXL2Q76L83 1435 aa15.09■□□□□ 0.01
CHCHD4P3-201ENST00000455954 CEP162Q5TB80 1403 aa15.09■□□□□ 0.01
CHCHD4P3-201ENST00000455954 ABCA8O94911 1581 aa15.07■□□□□ 0
CHCHD4P3-201ENST00000455954 SAMD9Q5K651 1589 aa15.07■□□□□ 0
CHCHD4P3-201ENST00000455954 RANGAP1P46060 587 aaPredicted RBP15.06■□□□□ 0
CHCHD4P3-201ENST00000455954 ZCCHC11Q5TAX3 1644 aaKnown RBP15.06■□□□□ 0
CHCHD4P3-201ENST00000455954 UBTFP17480 764 aaKnown RBP15.05■□□□□ -0
CHCHD4P3-201ENST00000455954 DIEXFQ68CQ4 756 aaKnown RBP15.04■□□□□ -0
CHCHD4P3-201ENST00000455954 EHMT2Q96KQ7 1210 aa15.03■□□□□ -0
CHCHD4P3-201ENST00000455954 GLI2P10070 1586 aa15.02■□□□□ -0
CHCHD4P3-201ENST00000455954 NEUROD1Q13562 356 aa15.02■□□□□ -0
CHCHD4P3-201ENST00000455954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
CHCHD4P3-201ENST00000455954 EFCAB5A4FU69 1503 aa15□□□□□ -0.01
CHCHD4P3-201ENST00000455954 EPRSP07814 1512 aaKnown RBP15□□□□□ -0.01
CHCHD4P3-201ENST00000455954 WDR7Q9Y4E6 1490 aa15□□□□□ -0.01
CHCHD4P3-201ENST00000455954 FHOD3Q2V2M9 1422 aa14.99□□□□□ -0.01
CHCHD4P3-201ENST00000455954 TSPOAP1O95153 1857 aa14.97□□□□□ -0.01
CHCHD4P3-201ENST00000455954 ATP10BO94823 1461 aa14.96□□□□□ -0.01
CHCHD4P3-201ENST00000455954 RAPGEF6Q8TEU7 1601 aa14.96□□□□□ -0.01
CHCHD4P3-201ENST00000455954 ARID3CA6NKF2 412 aa14.96□□□□□ -0.01
CHCHD4P3-201ENST00000455954 KCNH8Q96L42 1107 aa14.95□□□□□ -0.02
CHCHD4P3-201ENST00000455954 MAP3K4Q9Y6R4 1608 aa14.93□□□□□ -0.02
CHCHD4P3-201ENST00000455954 ZNF316A6NFI3 1004 aaPredicted RBP14.93□□□□□ -0.02
CHCHD4P3-201ENST00000455954 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
CHCHD4P3-201ENST00000455954 GTF3C3Q9Y5Q9 886 aa14.92□□□□□ -0.02
CHCHD4P3-201ENST00000455954 KDM6BO15054 1643 aa14.92□□□□□ -0.02
CHCHD4P3-201ENST00000455954 PPRC1Q5VV67 1664 aaKnown RBP14.91□□□□□ -0.02
CHCHD4P3-201ENST00000455954 NUP153P49790 1475 aaKnown RBP14.91□□□□□ -0.02
CHCHD4P3-201ENST00000455954 TEX14Q8IWB6 1497 aa14.9□□□□□ -0.02
CHCHD4P3-201ENST00000455954 ARHGAP35Q9NRY4 1499 aa14.89□□□□□ -0.03
CHCHD4P3-201ENST00000455954 CD109Q6YHK3 1445 aa14.89□□□□□ -0.03
CHCHD4P3-201ENST00000455954 FMN1Q68DA7 1419 aa14.88□□□□□ -0.03
CHCHD4P3-201ENST00000455954 CFAP43Q8NDM7 1665 aa14.87□□□□□ -0.03
CHCHD4P3-201ENST00000455954 PLEKHD1A6NEE1 506 aa14.86□□□□□ -0.03
CHCHD4P3-201ENST00000455954 MAGI3Q5TCQ9 1506 aa14.86□□□□□ -0.03
CHCHD4P3-201ENST00000455954 CLSPNQ9HAW4 1339 aa14.84□□□□□ -0.03
CHCHD4P3-201ENST00000455954 ATP1B4Q9UN42 357 aaPredicted RBP14.82□□□□□ -0.04
CHCHD4P3-201ENST00000455954 COL17A1Q9UMD9 1497 aaPredicted RBP14.82□□□□□ -0.04
CHCHD4P3-201ENST00000455954 ABCA9Q8IUA7 1624 aa14.81□□□□□ -0.04
CHCHD4P3-201ENST00000455954 VPS8Q8N3P4 1428 aa14.8□□□□□ -0.04
CHCHD4P3-201ENST00000455954 HECW1Q76N89 1606 aa14.8□□□□□ -0.04
CHCHD4P3-201ENST00000455954 CDK13Q14004 1512 aaKnown RBP14.78□□□□□ -0.04
CHCHD4P3-201ENST00000455954 CLIP1P30622 1438 aa14.77□□□□□ -0.04
CHCHD4P3-201ENST00000455954 PHLDB1Q86UU1 1377 aa14.77□□□□□ -0.04
CHCHD4P3-201ENST00000455954 AEBP2Q6ZN18 517 aaPredicted RBP14.77□□□□□ -0.05
CHCHD4P3-201ENST00000455954 CDK11AQ9UQ88 783 aaPredicted RBP14.77□□□□□ -0.05
CHCHD4P3-201ENST00000455954 ARAP3Q8WWN8 1544 aa14.74□□□□□ -0.05
CHCHD4P3-201ENST00000455954 CASKIN1Q8WXD9 1431 aa14.74□□□□□ -0.05
CHCHD4P3-201ENST00000455954 NEO1Q92859 1461 aa14.73□□□□□ -0.05
CHCHD4P3-201ENST00000455954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.72□□□□□ -0.05
CHCHD4P3-201ENST00000455954 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
CHCHD4P3-201ENST00000455954 CCDC18Q5T9S5 1454 aa14.69□□□□□ -0.06
CHCHD4P3-201ENST00000455954 TROQ12816 1431 aaPredicted RBP14.69□□□□□ -0.06
CHCHD4P3-201ENST00000455954 FYCO1Q9BQS8 1478 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms