RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 GAPVD1Q14C86 1478 aa22.71■■□□□ 1.23
GTF2IRD1-203ENST00000455841 ABCA10Q8WWZ4 1543 aa22.68■■□□□ 1.22
GTF2IRD1-203ENST00000455841 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
GTF2IRD1-203ENST00000455841 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
GTF2IRD1-203ENST00000455841 CCNB3Q8WWL7 1395 aa22.54■■□□□ 1.2
GTF2IRD1-203ENST00000455841 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
GTF2IRD1-203ENST00000455841 MTUS2Q5JR59 1369 aa22.51■■□□□ 1.19
GTF2IRD1-203ENST00000455841 NEUROD1Q13562 356 aa22.5■■□□□ 1.19
GTF2IRD1-203ENST00000455841 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
GTF2IRD1-203ENST00000455841 FHAD1B1AJZ9 1412 aa22.49■■□□□ 1.19
GTF2IRD1-203ENST00000455841 PHLDB1Q86UU1 1377 aa22.47■■□□□ 1.19
GTF2IRD1-203ENST00000455841 CHIC2Q9UKJ5 165 aa22.46■■□□□ 1.19
GTF2IRD1-203ENST00000455841 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
GTF2IRD1-203ENST00000455841 YTHDC1Q96MU7 727 aaKnown RBP22.42■■□□□ 1.18
GTF2IRD1-203ENST00000455841 LRRC9Q6ZRR7 1453 aa22.38■■□□□ 1.17
GTF2IRD1-203ENST00000455841 ZNF316A6NFI3 1004 aaPredicted RBP22.37■■□□□ 1.17
GTF2IRD1-203ENST00000455841 TIAM1Q13009 1591 aa22.36■■□□□ 1.17
GTF2IRD1-203ENST00000455841 CUL7Q14999 1698 aa22.36■■□□□ 1.17
GTF2IRD1-203ENST00000455841 FMN1Q68DA7 1419 aa22.33■■□□□ 1.17
GTF2IRD1-203ENST00000455841 SIN3AQ96ST3 1273 aa22.33■■□□□ 1.16
GTF2IRD1-203ENST00000455841 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
GTF2IRD1-203ENST00000455841 RRP7BPQ9NSQ0 103 aa22.32■■□□□ 1.16
GTF2IRD1-203ENST00000455841 GRIN2BQ13224 1484 aa22.31■■□□□ 1.16
GTF2IRD1-203ENST00000455841 RAB3GAP2Q9H2M9 1393 aa22.31■■□□□ 1.16
GTF2IRD1-203ENST00000455841 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
GTF2IRD1-203ENST00000455841 SNAPC4Q5SXM2 1469 aa22.31■■□□□ 1.16
GTF2IRD1-203ENST00000455841 ZNF777Q9ULD5 760 aaPredicted RBP22.31■■□□□ 1.16
GTF2IRD1-203ENST00000455841 DHX57Q6P158 1386 aaKnown RBP22.3■■□□□ 1.16
GTF2IRD1-203ENST00000455841 RRBP1Q9P2E9 1410 aaKnown RBP22.28■■□□□ 1.16
GTF2IRD1-203ENST00000455841 CASKIN1Q8WXD9 1431 aa22.26■■□□□ 1.15
GTF2IRD1-203ENST00000455841 CTTNBP2Q8WZ74 1663 aa22.25■■□□□ 1.15
GTF2IRD1-203ENST00000455841 WDR97A6NE52 1622 aa22.25■■□□□ 1.15
GTF2IRD1-203ENST00000455841 TRIM52Q96A61 297 aa22.25■■□□□ 1.15
GTF2IRD1-203ENST00000455841 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
GTF2IRD1-203ENST00000455841 HIRIP3Q9BW71 556 aaPredicted RBP22.23■■□□□ 1.15
GTF2IRD1-203ENST00000455841 FYCO1Q9BQS8 1478 aa22.2■■□□□ 1.14
GTF2IRD1-203ENST00000455841 EFCAB5A4FU69 1503 aa22.2■■□□□ 1.14
GTF2IRD1-203ENST00000455841 JPH4Q96JJ6 628 aa22.18■■□□□ 1.14
GTF2IRD1-203ENST00000455841 PBRM1Q86U86 1689 aa22.18■■□□□ 1.14
GTF2IRD1-203ENST00000455841 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
GTF2IRD1-203ENST00000455841 SETD5Q9C0A6 1442 aa22.15■■□□□ 1.14
GTF2IRD1-203ENST00000455841 IQGAP2Q13576 1575 aa22.14■■□□□ 1.13
GTF2IRD1-203ENST00000455841 MIER1Q8N108 512 aa22.12■■□□□ 1.13
GTF2IRD1-203ENST00000455841 WDR62O43379 1518 aa22.11■■□□□ 1.13
GTF2IRD1-203ENST00000455841 ADAMTS12P58397 1594 aa22.11■■□□□ 1.13
GTF2IRD1-203ENST00000455841 ZNF644Q9H582 1327 aaPredicted RBP22.11■■□□□ 1.13
GTF2IRD1-203ENST00000455841 EIF4G3O43432 1585 aaKnown RBP22.11■■□□□ 1.13
GTF2IRD1-203ENST00000455841 NCOA2Q15596 1464 aa22.1■■□□□ 1.13
GTF2IRD1-203ENST00000455841 FGD6Q6ZV73 1430 aa22.1■■□□□ 1.13
GTF2IRD1-203ENST00000455841 GRIN2AQ12879 1464 aa22.08■■□□□ 1.12
GTF2IRD1-203ENST00000455841 FOXD1Q16676 465 aa22.07■■□□□ 1.12
GTF2IRD1-203ENST00000455841 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
GTF2IRD1-203ENST00000455841 MAP3K1Q13233 1512 aa22■■□□□ 1.11
GTF2IRD1-203ENST00000455841 CFAP43Q8NDM7 1665 aa22■■□□□ 1.11
GTF2IRD1-203ENST00000455841 KIAA0586Q9BVV6 1533 aa22■■□□□ 1.11
GTF2IRD1-203ENST00000455841 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
GTF2IRD1-203ENST00000455841 EPRSP07814 1512 aaKnown RBP21.99■■□□□ 1.11
GTF2IRD1-203ENST00000455841 PLB1Q6P1J6 1458 aa21.99■■□□□ 1.11
GTF2IRD1-203ENST00000455841 CFDP1Q9UEE9 299 aaPredicted RBP21.99■■□□□ 1.11
GTF2IRD1-203ENST00000455841 MYOM3Q5VTT5 1437 aa21.99■■□□□ 1.11
GTF2IRD1-203ENST00000455841 PTPRKQ15262 1439 aa21.99■■□□□ 1.11
GTF2IRD1-203ENST00000455841 KCNH8Q96L42 1107 aa21.98■■□□□ 1.11
GTF2IRD1-203ENST00000455841 MAGI3Q5TCQ9 1506 aa21.97■■□□□ 1.11
GTF2IRD1-203ENST00000455841 THOC2Q8NI27 1593 aaKnown RBP21.96■■□□□ 1.11
GTF2IRD1-203ENST00000455841 PLEKHD1A6NEE1 506 aa21.95■■□□□ 1.1
GTF2IRD1-203ENST00000455841 PRG4Q92954 1404 aaPredicted RBP21.94■■□□□ 1.1
GTF2IRD1-203ENST00000455841 SYNJ2O15056 1496 aa21.94■■□□□ 1.1
GTF2IRD1-203ENST00000455841 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
GTF2IRD1-203ENST00000455841 LRRIQ1Q96JM4 1722 aa21.92■■□□□ 1.1
GTF2IRD1-203ENST00000455841 CARMIL2Q6F5E8 1435 aa21.92■■□□□ 1.1
GTF2IRD1-203ENST00000455841 DISP1Q96F81 1524 aa21.91■■□□□ 1.1
GTF2IRD1-203ENST00000455841 TONSLQ96HA7 1378 aa21.9■■□□□ 1.1
GTF2IRD1-203ENST00000455841 DDX10Q13206 875 aaKnown RBP21.9■■□□□ 1.1
GTF2IRD1-203ENST00000455841 CCDC18Q5T9S5 1454 aa21.89■■□□□ 1.09
GTF2IRD1-203ENST00000455841 MAGI1Q96QZ7 1491 aaPredicted RBP21.89■■□□□ 1.09
GTF2IRD1-203ENST00000455841 CENPBP07199 599 aaPredicted RBP21.88■■□□□ 1.09
GTF2IRD1-203ENST00000455841 CNGB1Q14028 1251 aaPredicted RBP21.88■■□□□ 1.09
GTF2IRD1-203ENST00000455841 HECW1Q76N89 1606 aa21.88■■□□□ 1.09
GTF2IRD1-203ENST00000455841 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
GTF2IRD1-203ENST00000455841 ZNF326Q5BKZ1 582 aaKnown RBP21.87■■□□□ 1.09
GTF2IRD1-203ENST00000455841 SUPT6HQ7KZ85 1726 aaKnown RBP21.87■■□□□ 1.09
GTF2IRD1-203ENST00000455841 EHBP1L1Q8N3D4 1523 aa21.86■■□□□ 1.09
GTF2IRD1-203ENST00000455841 KIAA0556O60303 1618 aa21.83■■□□□ 1.09
GTF2IRD1-203ENST00000455841 NUP153P49790 1475 aaKnown RBP21.83■■□□□ 1.09
GTF2IRD1-203ENST00000455841 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
GTF2IRD1-203ENST00000455841 UGGT2Q9NYU1 1516 aa21.82■■□□□ 1.08
GTF2IRD1-203ENST00000455841 MAPKBP1O60336 1514 aa21.82■■□□□ 1.08
GTF2IRD1-203ENST00000455841 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
GTF2IRD1-203ENST00000455841 PTPRGP23470 1445 aa21.8■■□□□ 1.08
GTF2IRD1-203ENST00000455841 HNRNPMP52272 730 aaKnown RBP eCLIP21.8■■□□□ 1.08
GTF2IRD1-203ENST00000455841 PTPN23Q9H3S7 1636 aa21.79■■□□□ 1.08
GTF2IRD1-203ENST00000455841 NAIPQ13075 1403 aa21.78■■□□□ 1.08
GTF2IRD1-203ENST00000455841 MYT1LQ9UL68 1186 aa21.78■■□□□ 1.08
GTF2IRD1-203ENST00000455841 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
GTF2IRD1-203ENST00000455841 POLR3GLQ9BT43 218 aa21.77■■□□□ 1.08
GTF2IRD1-203ENST00000455841 MPHOSPH9Q99550 1183 aa21.76■■□□□ 1.07
GTF2IRD1-203ENST00000455841 GTF3C3Q9Y5Q9 886 aa21.74■■□□□ 1.07
GTF2IRD1-203ENST00000455841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.74■■□□□ 1.073e-9■■□□□ 14
GTF2IRD1-203ENST00000455841 HFM1A2PYH4 1435 aa21.72■■□□□ 1.07
GTF2IRD1-203ENST00000455841 PPP1R15AO75807 674 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms