RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 EEA1Q15075 1411 aa11.92□□□□□ -0.5
COMMD1-205ENST00000455659 IQGAP2Q13576 1575 aa11.92□□□□□ -0.5
COMMD1-205ENST00000455659 ERCC6L2Q5T890 1561 aa11.92□□□□□ -0.5
COMMD1-205ENST00000455659 KIAA0586Q9BVV6 1533 aa11.9□□□□□ -0.5
COMMD1-205ENST00000455659 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
COMMD1-205ENST00000455659 CHIC1Q5VXU3 224 aa11.87□□□□□ -0.51
COMMD1-205ENST00000455659 KIF21BO75037 1637 aa11.86□□□□□ -0.51
COMMD1-205ENST00000455659 PRG4Q92954 1404 aaPredicted RBP11.85□□□□□ -0.51
COMMD1-205ENST00000455659 KIAA0556O60303 1618 aa11.82□□□□□ -0.52
COMMD1-205ENST00000455659 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
COMMD1-205ENST00000455659 CYB5RLQ6IPT4 315 aa11.79□□□□□ -0.52
COMMD1-205ENST00000455659 CSRNP3Q8WYN3 585 aa11.78□□□□□ -0.52
COMMD1-205ENST00000455659 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
COMMD1-205ENST00000455659 DISP1Q96F81 1524 aa11.77□□□□□ -0.52
COMMD1-205ENST00000455659 FAM9AQ8IZU1 332 aaPredicted RBP11.77□□□□□ -0.53
COMMD1-205ENST00000455659 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.53
COMMD1-205ENST00000455659 GOLGA3Q08378 1498 aa11.76□□□□□ -0.53
COMMD1-205ENST00000455659 ADCY10Q96PN6 1610 aa11.75□□□□□ -0.53
COMMD1-205ENST00000455659 SAMD9Q5K651 1589 aa11.75□□□□□ -0.53
COMMD1-205ENST00000455659 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
COMMD1-205ENST00000455659 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
COMMD1-205ENST00000455659 ABCC2Q92887 1545 aa11.69□□□□□ -0.54
COMMD1-205ENST00000455659 PTPRGP23470 1445 aa11.69□□□□□ -0.54
COMMD1-205ENST00000455659 MAPKBP1O60336 1514 aa11.65□□□□□ -0.54
COMMD1-205ENST00000455659 TTBK1Q5TCY1 1321 aaPredicted RBP11.65□□□□□ -0.54
COMMD1-205ENST00000455659 ZCCHC11Q5TAX3 1644 aaKnown RBP11.64□□□□□ -0.55
COMMD1-205ENST00000455659 UHRF1BP1LA0JNW5 1464 aa11.64□□□□□ -0.55
COMMD1-205ENST00000455659 ABCA8O94911 1581 aa11.64□□□□□ -0.55
COMMD1-205ENST00000455659 EHMT2Q96KQ7 1210 aa11.64□□□□□ -0.55
COMMD1-205ENST00000455659 KIF13AQ9H1H9 1805 aa11.64□□□□□ -0.55
COMMD1-205ENST00000455659 UACAQ9BZF9 1416 aa11.63□□□□□ -0.55
COMMD1-205ENST00000455659 PLB1Q6P1J6 1458 aa11.63□□□□□ -0.55
COMMD1-205ENST00000455659 FHOD3Q2V2M9 1422 aa11.62□□□□□ -0.55
COMMD1-205ENST00000455659 RAPGEF6Q8TEU7 1601 aa11.62□□□□□ -0.55
COMMD1-205ENST00000455659 DIP2BQ9P265 1576 aa11.61□□□□□ -0.55
COMMD1-205ENST00000455659 UBTFP17480 764 aaKnown RBP11.6□□□□□ -0.55
COMMD1-205ENST00000455659 KDM5BQ9UGL1 1544 aa11.59□□□□□ -0.55
COMMD1-205ENST00000455659 RANGAP1P46060 587 aaPredicted RBP11.58□□□□□ -0.56
COMMD1-205ENST00000455659 ARHGAP35Q9NRY4 1499 aa11.57□□□□□ -0.56
COMMD1-205ENST00000455659 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
COMMD1-205ENST00000455659 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
COMMD1-205ENST00000455659 P3H3Q8IVL6 736 aa11.55□□□□□ -0.56
COMMD1-205ENST00000455659 HECW1Q76N89 1606 aa11.55□□□□□ -0.56
COMMD1-205ENST00000455659 ABCC10Q5T3U5 1492 aa11.55□□□□□ -0.56
COMMD1-205ENST00000455659 ASXL2Q76L83 1435 aa11.54□□□□□ -0.56
COMMD1-205ENST00000455659 PCF11O94913 1555 aaKnown RBP11.54□□□□□ -0.56
COMMD1-205ENST00000455659 NUP153P49790 1475 aaKnown RBP11.53□□□□□ -0.56
COMMD1-205ENST00000455659 WDR7Q9Y4E6 1490 aa11.53□□□□□ -0.56
COMMD1-205ENST00000455659 TSPOAP1O95153 1857 aa11.53□□□□□ -0.56
COMMD1-205ENST00000455659 FMN1Q68DA7 1419 aa11.52□□□□□ -0.56
COMMD1-205ENST00000455659 CLIP1P30622 1438 aa11.51□□□□□ -0.57
COMMD1-205ENST00000455659 GLI2P10070 1586 aa11.5□□□□□ -0.57
COMMD1-205ENST00000455659 LRRIQ1Q96JM4 1722 aa11.5□□□□□ -0.57
COMMD1-205ENST00000455659 MAP3K4Q9Y6R4 1608 aa11.49□□□□□ -0.57
COMMD1-205ENST00000455659 CEP162Q5TB80 1403 aa11.49□□□□□ -0.57
COMMD1-205ENST00000455659 EPRSP07814 1512 aaKnown RBP11.49□□□□□ -0.57
COMMD1-205ENST00000455659 PPRC1Q5VV67 1664 aaKnown RBP11.49□□□□□ -0.57
COMMD1-205ENST00000455659 CDK13Q14004 1512 aaKnown RBP11.48□□□□□ -0.57
COMMD1-205ENST00000455659 CFAP43Q8NDM7 1665 aa11.48□□□□□ -0.57
COMMD1-205ENST00000455659 ATP10BO94823 1461 aa11.47□□□□□ -0.57
COMMD1-205ENST00000455659 FYCO1Q9BQS8 1478 aa11.46□□□□□ -0.57
COMMD1-205ENST00000455659 ARID3CA6NKF2 412 aa11.46□□□□□ -0.57
COMMD1-205ENST00000455659 FAM69CQ0P6D2 419 aa11.44□□□□□ -0.58
COMMD1-205ENST00000455659 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
COMMD1-205ENST00000455659 ABCA9Q8IUA7 1624 aa11.43□□□□□ -0.58
COMMD1-205ENST00000455659 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
COMMD1-205ENST00000455659 KDM6BO15054 1643 aa11.42□□□□□ -0.58
COMMD1-205ENST00000455659 KIF14Q15058 1648 aa11.42□□□□□ -0.58
COMMD1-205ENST00000455659 TTC37Q6PGP7 1564 aa11.41□□□□□ -0.58
COMMD1-205ENST00000455659 TEX14Q8IWB6 1497 aa11.4□□□□□ -0.58
COMMD1-205ENST00000455659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.39□□□□□ -0.59
COMMD1-205ENST00000455659 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
COMMD1-205ENST00000455659 MYO5CQ9NQX4 1742 aa11.38□□□□□ -0.59
COMMD1-205ENST00000455659 CFAP74Q9C0B2 1584 aa11.37□□□□□ -0.59
COMMD1-205ENST00000455659 MAGI3Q5TCQ9 1506 aa11.36□□□□□ -0.59
COMMD1-205ENST00000455659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.36□□□□□ -0.59
COMMD1-205ENST00000455659 ATP1B4Q9UN42 357 aaPredicted RBP11.36□□□□□ -0.59
COMMD1-205ENST00000455659 CD109Q6YHK3 1445 aa11.35□□□□□ -0.59
COMMD1-205ENST00000455659 LOC105371045A0A1W2PR82 267 aa11.35□□□□□ -0.59
COMMD1-205ENST00000455659 TROQ12816 1431 aaPredicted RBP11.35□□□□□ -0.59
COMMD1-205ENST00000455659 VPS8Q8N3P4 1428 aa11.35□□□□□ -0.59
COMMD1-205ENST00000455659 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
COMMD1-205ENST00000455659 EHBP1L1Q8N3D4 1523 aa11.33□□□□□ -0.6
COMMD1-205ENST00000455659 PREX2Q70Z35 1606 aa11.32□□□□□ -0.6
COMMD1-205ENST00000455659 TIAM1Q13009 1591 aa11.32□□□□□ -0.6
COMMD1-205ENST00000455659 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
COMMD1-205ENST00000455659 CDC42BPAQ5VT25 1732 aa11.3□□□□□ -0.6
COMMD1-205ENST00000455659 ARAP3Q8WWN8 1544 aa11.3□□□□□ -0.6
COMMD1-205ENST00000455659 CDK11AQ9UQ88 783 aaPredicted RBP11.29□□□□□ -0.6
COMMD1-205ENST00000455659 NEO1Q92859 1461 aa11.29□□□□□ -0.6
COMMD1-205ENST00000455659 ITSN2Q9NZM3 1697 aa11.28□□□□□ -0.6
COMMD1-205ENST00000455659 FANCAO15360 1455 aa11.28□□□□□ -0.6
COMMD1-205ENST00000455659 CDC42BPBQ9Y5S2 1711 aa11.28□□□□□ -0.6
COMMD1-205ENST00000455659 ARHGAP5Q13017 1502 aa11.28□□□□□ -0.6
COMMD1-205ENST00000455659 FRMPD1Q5SYB0 1578 aa11.28□□□□□ -0.6
COMMD1-205ENST00000455659 SUPT6HQ7KZ85 1726 aaKnown RBP11.27□□□□□ -0.61
COMMD1-205ENST00000455659 RICTORQ6R327 1708 aa11.26□□□□□ -0.61
COMMD1-205ENST00000455659 MTUS2Q5JR59 1369 aa11.26□□□□□ -0.61
COMMD1-205ENST00000455659 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
COMMD1-205ENST00000455659 ABCC1P33527 1531 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms