RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 CLASP1Q7Z460 1538 aa18.32■□□□□ 0.52
TRAF4-206ENST00000454852 IQGAP2Q13576 1575 aa18.29■□□□□ 0.52
TRAF4-206ENST00000454852 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
TRAF4-206ENST00000454852 UBTFP17480 764 aaKnown RBP18.28■□□□□ 0.52
TRAF4-206ENST00000454852 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
TRAF4-206ENST00000454852 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
TRAF4-206ENST00000454852 UGGT2Q9NYU1 1516 aa18.24■□□□□ 0.51
TRAF4-206ENST00000454852 EHMT2Q96KQ7 1210 aa18.19■□□□□ 0.5
TRAF4-206ENST00000454852 EFCAB5A4FU69 1503 aa18.18■□□□□ 0.5
TRAF4-206ENST00000454852 SAMD9Q5K651 1589 aa18.18■□□□□ 0.5
TRAF4-206ENST00000454852 JPH4Q96JJ6 628 aa18.17■□□□□ 0.5
TRAF4-206ENST00000454852 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
TRAF4-206ENST00000454852 DISP1Q96F81 1524 aa18.13■□□□□ 0.49
TRAF4-206ENST00000454852 CLIP1P30622 1438 aa18.13■□□□□ 0.49
TRAF4-206ENST00000454852 ARHGAP35Q9NRY4 1499 aa18.12■□□□□ 0.49
TRAF4-206ENST00000454852 KIAA0556O60303 1618 aa18.12■□□□□ 0.49
TRAF4-206ENST00000454852 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
TRAF4-206ENST00000454852 PRG4Q92954 1404 aaPredicted RBP18.1■□□□□ 0.49
TRAF4-206ENST00000454852 ERCC6L2Q5T890 1561 aa18.04■□□□□ 0.48
TRAF4-206ENST00000454852 ARAP1Q96P48 1450 aa18.03■□□□□ 0.48
TRAF4-206ENST00000454852 ARHGEF11O15085 1522 aa18.01■□□□□ 0.47
TRAF4-206ENST00000454852 FHOD3Q2V2M9 1422 aa17.99■□□□□ 0.47
TRAF4-206ENST00000454852 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
TRAF4-206ENST00000454852 RANGAP1P46060 587 aaPredicted RBP17.97■□□□□ 0.47
TRAF4-206ENST00000454852 PTPRGP23470 1445 aa17.95■□□□□ 0.46
TRAF4-206ENST00000454852 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
TRAF4-206ENST00000454852 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
TRAF4-206ENST00000454852 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
TRAF4-206ENST00000454852 VPS8Q8N3P4 1428 aa17.94■□□□□ 0.46
TRAF4-206ENST00000454852 P3H3Q8IVL6 736 aa17.93■□□□□ 0.46
TRAF4-206ENST00000454852 ABCA8O94911 1581 aa17.91■□□□□ 0.46
TRAF4-206ENST00000454852 CASKIN1Q8WXD9 1431 aa17.89■□□□□ 0.46
TRAF4-206ENST00000454852 UHRF1BP1LA0JNW5 1464 aa17.88■□□□□ 0.45
TRAF4-206ENST00000454852 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
TRAF4-206ENST00000454852 FYCO1Q9BQS8 1478 aa17.88■□□□□ 0.45
TRAF4-206ENST00000454852 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
TRAF4-206ENST00000454852 UACAQ9BZF9 1416 aa17.87■□□□□ 0.45
TRAF4-206ENST00000454852 PCF11O94913 1555 aaKnown RBP17.86■□□□□ 0.45
TRAF4-206ENST00000454852 PLB1Q6P1J6 1458 aa17.85■□□□□ 0.45
TRAF4-206ENST00000454852 ABCC2Q92887 1545 aa17.85■□□□□ 0.45
TRAF4-206ENST00000454852 HECW1Q76N89 1606 aa17.83■□□□□ 0.45
TRAF4-206ENST00000454852 NUP153P49790 1475 aaKnown RBP17.82■□□□□ 0.44
TRAF4-206ENST00000454852 MAP3K1Q13233 1512 aa17.8■□□□□ 0.44
TRAF4-206ENST00000454852 ADCY10Q96PN6 1610 aa17.79■□□□□ 0.44
TRAF4-206ENST00000454852 KDM5BQ9UGL1 1544 aa17.78■□□□□ 0.44
TRAF4-206ENST00000454852 CCDC18Q5T9S5 1454 aa17.78■□□□□ 0.44
TRAF4-206ENST00000454852 EPRSP07814 1512 aaKnown RBP17.77■□□□□ 0.43
TRAF4-206ENST00000454852 LRRIQ1Q96JM4 1722 aa17.76■□□□□ 0.43
TRAF4-206ENST00000454852 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
TRAF4-206ENST00000454852 ATP10BO94823 1461 aa17.74■□□□□ 0.43
TRAF4-206ENST00000454852 CFAP43Q8NDM7 1665 aa17.74■□□□□ 0.43
TRAF4-206ENST00000454852 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
TRAF4-206ENST00000454852 TIAM1Q13009 1591 aa17.72■□□□□ 0.43
TRAF4-206ENST00000454852 ZCCHC11Q5TAX3 1644 aaKnown RBP17.7■□□□□ 0.42
TRAF4-206ENST00000454852 CDK13Q14004 1512 aaKnown RBP17.68■□□□□ 0.42
TRAF4-206ENST00000454852 MAPKBP1O60336 1514 aa17.65■□□□□ 0.42
TRAF4-206ENST00000454852 ATP1B4Q9UN42 357 aaPredicted RBP17.64■□□□□ 0.41
TRAF4-206ENST00000454852 LRRC9Q6ZRR7 1453 aa17.63■□□□□ 0.41
TRAF4-206ENST00000454852 APLP2Q06481 763 aa17.63■□□□□ 0.41
TRAF4-206ENST00000454852 CDK11AQ9UQ88 783 aaPredicted RBP17.63■□□□□ 0.41
TRAF4-206ENST00000454852 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
TRAF4-206ENST00000454852 EHBP1L1Q8N3D4 1523 aa17.62■□□□□ 0.41
TRAF4-206ENST00000454852 NPM1P06748 294 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRAF4-206ENST00000454852 TROQ12816 1431 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-206ENST00000454852 WDR7Q9Y4E6 1490 aa17.58■□□□□ 0.41
TRAF4-206ENST00000454852 PLEKHD1A6NEE1 506 aa17.58■□□□□ 0.4
TRAF4-206ENST00000454852 ASXL2Q76L83 1435 aa17.57■□□□□ 0.4
TRAF4-206ENST00000454852 MTUS2Q5JR59 1369 aa17.56■□□□□ 0.4
TRAF4-206ENST00000454852 ARID3CA6NKF2 412 aa17.56■□□□□ 0.4
TRAF4-206ENST00000454852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-206ENST00000454852 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
TRAF4-206ENST00000454852 KANK4Q5T7N3 995 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-206ENST00000454852 SUPT6HQ7KZ85 1726 aaKnown RBP17.52■□□□□ 0.4
TRAF4-206ENST00000454852 KIF14Q15058 1648 aa17.52■□□□□ 0.4
TRAF4-206ENST00000454852 ABCC10Q5T3U5 1492 aa17.5■□□□□ 0.39
TRAF4-206ENST00000454852 GLI2P10070 1586 aa17.5■□□□□ 0.39
TRAF4-206ENST00000454852 NCOA2Q15596 1464 aa17.5■□□□□ 0.39
TRAF4-206ENST00000454852 ABCA9Q8IUA7 1624 aa17.48■□□□□ 0.39
TRAF4-206ENST00000454852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.47■□□□□ 0.391e-10■□□□□ 8.2
TRAF4-206ENST00000454852 DIP2BQ9P265 1576 aa17.46■□□□□ 0.39
TRAF4-206ENST00000454852 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
TRAF4-206ENST00000454852 TTC37Q6PGP7 1564 aa17.43■□□□□ 0.38
TRAF4-206ENST00000454852 ITSN2Q9NZM3 1697 aa17.41■□□□□ 0.38
TRAF4-206ENST00000454852 GPATCH8Q9UKJ3 1502 aaKnown RBP17.41■□□□□ 0.38
TRAF4-206ENST00000454852 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
TRAF4-206ENST00000454852 MAP3K4Q9Y6R4 1608 aa17.4■□□□□ 0.38
TRAF4-206ENST00000454852 MYOM3Q5VTT5 1437 aa17.4■□□□□ 0.38
TRAF4-206ENST00000454852 CDC42BPAQ5VT25 1732 aa17.4■□□□□ 0.38
TRAF4-206ENST00000454852 PREX2Q70Z35 1606 aa17.39■□□□□ 0.38
TRAF4-206ENST00000454852 MIA2Q96PC5 1412 aa17.39■□□□□ 0.38
TRAF4-206ENST00000454852 MYO5CQ9NQX4 1742 aa17.39■□□□□ 0.37
TRAF4-206ENST00000454852 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
TRAF4-206ENST00000454852 KIF13AQ9H1H9 1805 aa17.39■□□□□ 0.37
TRAF4-206ENST00000454852 CCNB3Q8WWL7 1395 aa17.39■□□□□ 0.37
TRAF4-206ENST00000454852 PLCH2O75038 1416 aa17.38■□□□□ 0.37
TRAF4-206ENST00000454852 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
TRAF4-206ENST00000454852 RRBP1Q9P2E9 1410 aaKnown RBP17.36■□□□□ 0.37
TRAF4-206ENST00000454852 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
TRAF4-206ENST00000454852 CD109Q6YHK3 1445 aa17.35■□□□□ 0.37
TRAF4-206ENST00000454852 FGD6Q6ZV73 1430 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms