RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 CTTNBP2Q8WZ74 1663 aa13.43□□□□□ -0.26
RPE-216ENST00000454822 ERCC6Q03468 1493 aa13.42□□□□□ -0.26
RPE-216ENST00000454822 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
RPE-216ENST00000454822 HNRNPUL2Q1KMD3 747 aaKnown RBP13.42□□□□□ -0.26
RPE-216ENST00000454822 FHAD1B1AJZ9 1412 aa13.4□□□□□ -0.26
RPE-216ENST00000454822 EFCAB5A4FU69 1503 aa13.4□□□□□ -0.26
RPE-216ENST00000454822 PBRM1Q86U86 1689 aa13.4□□□□□ -0.27
RPE-216ENST00000454822 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
RPE-216ENST00000454822 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
RPE-216ENST00000454822 GRIN2BQ13224 1484 aa13.38□□□□□ -0.27
RPE-216ENST00000454822 ZNF608Q9ULD9 1512 aaPredicted RBP13.38□□□□□ -0.27
RPE-216ENST00000454822 TIAM1Q13009 1591 aa13.36□□□□□ -0.27
RPE-216ENST00000454822 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
RPE-216ENST00000454822 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
RPE-216ENST00000454822 ATP1B4Q9UN42 357 aaPredicted RBP13.34□□□□□ -0.27
RPE-216ENST00000454822 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
RPE-216ENST00000454822 CASKIN1Q8WXD9 1431 aa13.33□□□□□ -0.28
RPE-216ENST00000454822 RRBP1Q9P2E9 1410 aaKnown RBP13.33□□□□□ -0.28
RPE-216ENST00000454822 SAMD9Q5K651 1589 aa13.32□□□□□ -0.28
RPE-216ENST00000454822 FMN1Q68DA7 1419 aa13.32□□□□□ -0.28
RPE-216ENST00000454822 LRRC9Q6ZRR7 1453 aa13.32□□□□□ -0.28
RPE-216ENST00000454822 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
RPE-216ENST00000454822 CCNB3Q8WWL7 1395 aa13.29□□□□□ -0.28
RPE-216ENST00000454822 CFAP43Q8NDM7 1665 aa13.28□□□□□ -0.28
RPE-216ENST00000454822 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
RPE-216ENST00000454822 SNAPC4Q5SXM2 1469 aa13.28□□□□□ -0.28
RPE-216ENST00000454822 IQGAP2Q13576 1575 aa13.26□□□□□ -0.29
RPE-216ENST00000454822 PHLDB1Q86UU1 1377 aa13.24□□□□□ -0.29
RPE-216ENST00000454822 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
RPE-216ENST00000454822 MAGI1Q96QZ7 1491 aaPredicted RBP13.22□□□□□ -0.29
RPE-216ENST00000454822 KIAA0586Q9BVV6 1533 aa13.22□□□□□ -0.29
RPE-216ENST00000454822 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.3
RPE-216ENST00000454822 CHMP7Q8WUX9 453 aaPredicted RBP13.21□□□□□ -0.3
RPE-216ENST00000454822 ITGAEP38570 1179 aa13.2□□□□□ -0.3
RPE-216ENST00000454822 LRRIQ1Q96JM4 1722 aa13.18□□□□□ -0.3
RPE-216ENST00000454822 SYNJ2O15056 1496 aa13.18□□□□□ -0.3
RPE-216ENST00000454822 MTUS2Q5JR59 1369 aa13.17□□□□□ -0.3
RPE-216ENST00000454822 FBLN2P98095 1184 aa13.16□□□□□ -0.3
RPE-216ENST00000454822 FAM50AQ14320 339 aaKnown RBP13.16□□□□□ -0.3
RPE-216ENST00000454822 DISP1Q96F81 1524 aa13.15□□□□□ -0.3
RPE-216ENST00000454822 DHX57Q6P158 1386 aaKnown RBP13.14□□□□□ -0.31
RPE-216ENST00000454822 CCDC18Q5T9S5 1454 aa13.13□□□□□ -0.31
RPE-216ENST00000454822 CEP170Q5SW79 1584 aa13.13□□□□□ -0.31
RPE-216ENST00000454822 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
RPE-216ENST00000454822 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
RPE-216ENST00000454822 HECW1Q76N89 1606 aa13.12□□□□□ -0.31
RPE-216ENST00000454822 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
RPE-216ENST00000454822 NUP160Q12769 1436 aa13.11□□□□□ -0.31
RPE-216ENST00000454822 EPRSP07814 1512 aaKnown RBP13.11□□□□□ -0.31
RPE-216ENST00000454822 FGD6Q6ZV73 1430 aa13.1□□□□□ -0.31
RPE-216ENST00000454822 EHBP1L1Q8N3D4 1523 aa13.1□□□□□ -0.31
RPE-216ENST00000454822 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
RPE-216ENST00000454822 MAGI3Q5TCQ9 1506 aa13.09□□□□□ -0.31
RPE-216ENST00000454822 JPH4Q96JJ6 628 aa13.09□□□□□ -0.31
RPE-216ENST00000454822 SUPT6HQ7KZ85 1726 aaKnown RBP13.09□□□□□ -0.31
RPE-216ENST00000454822 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
RPE-216ENST00000454822 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
RPE-216ENST00000454822 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
RPE-216ENST00000454822 CDK13Q14004 1512 aaKnown RBP13.07□□□□□ -0.32
RPE-216ENST00000454822 MYOM3Q5VTT5 1437 aa13.07□□□□□ -0.32
RPE-216ENST00000454822 ARHGEF11O15085 1522 aa13.06□□□□□ -0.32
RPE-216ENST00000454822 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
RPE-216ENST00000454822 NUP153P49790 1475 aaKnown RBP13.03□□□□□ -0.32
RPE-216ENST00000454822 RAPGEF6Q8TEU7 1601 aa13.03□□□□□ -0.32
RPE-216ENST00000454822 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
RPE-216ENST00000454822 PTPRKQ15262 1439 aa13□□□□□ -0.33
RPE-216ENST00000454822 PTPN23Q9H3S7 1636 aa13□□□□□ -0.33
RPE-216ENST00000454822 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
RPE-216ENST00000454822 CDK11AQ9UQ88 783 aaPredicted RBP12.99□□□□□ -0.33
RPE-216ENST00000454822 TCOF1Q13428 1488 aaKnown RBP12.98□□□□□ -0.33
RPE-216ENST00000454822 MIA2Q96PC5 1412 aa12.97□□□□□ -0.33
RPE-216ENST00000454822 MAPKBP1O60336 1514 aa12.96□□□□□ -0.34
RPE-216ENST00000454822 CHD1O14646 1710 aa12.95□□□□□ -0.34
RPE-216ENST00000454822 DIEXFQ68CQ4 756 aaKnown RBP12.95□□□□□ -0.34
RPE-216ENST00000454822 HFM1A2PYH4 1435 aa12.95□□□□□ -0.34
RPE-216ENST00000454822 PRG4Q92954 1404 aaPredicted RBP12.95□□□□□ -0.34
RPE-216ENST00000454822 TROQ12816 1431 aaPredicted RBP12.93□□□□□ -0.34
RPE-216ENST00000454822 ABCA8O94911 1581 aa12.92□□□□□ -0.34
RPE-216ENST00000454822 NAIPQ13075 1403 aa12.92□□□□□ -0.34
RPE-216ENST00000454822 PTPRGP23470 1445 aa12.91□□□□□ -0.34
RPE-216ENST00000454822 CHIC2Q9UKJ5 165 aa12.91□□□□□ -0.34
RPE-216ENST00000454822 RRP7BPQ9NSQ0 103 aa12.89□□□□□ -0.35
RPE-216ENST00000454822 ATP10BO94823 1461 aa12.89□□□□□ -0.35
RPE-216ENST00000454822 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
RPE-216ENST00000454822 SIN3AQ96ST3 1273 aa12.89□□□□□ -0.35
RPE-216ENST00000454822 ZNF644Q9H582 1327 aaPredicted RBP12.88□□□□□ -0.35
RPE-216ENST00000454822 UACAQ9BZF9 1416 aa12.87□□□□□ -0.35
RPE-216ENST00000454822 SHROOM2Q13796 1616 aa12.87□□□□□ -0.35
RPE-216ENST00000454822 NEUROD1Q13562 356 aa12.86□□□□□ -0.35
RPE-216ENST00000454822 CFDP1Q9UEE9 299 aaPredicted RBP12.86□□□□□ -0.35
RPE-216ENST00000454822 ADCY10Q96PN6 1610 aa12.86□□□□□ -0.35
RPE-216ENST00000454822 KIF14Q15058 1648 aa12.85□□□□□ -0.35
RPE-216ENST00000454822 AKNAQ7Z591 1439 aa12.85□□□□□ -0.35
RPE-216ENST00000454822 GPATCH8Q9UKJ3 1502 aaKnown RBP12.85□□□□□ -0.35
RPE-216ENST00000454822 DAPK1P53355 1430 aa12.85□□□□□ -0.35
RPE-216ENST00000454822 ABCC5O15440 1437 aa12.84□□□□□ -0.35
RPE-216ENST00000454822 TIMELESSQ9UNS1 1208 aa12.83□□□□□ -0.35
RPE-216ENST00000454822 GCC2Q8IWJ2 1684 aa12.82□□□□□ -0.36
RPE-216ENST00000454822 DNMT1P26358 1616 aaKnown RBP12.82□□□□□ -0.36
RPE-216ENST00000454822 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms