RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 CYB5RLQ6IPT4 315 aa26.01■■□□□ 1.75
RFC5-204ENST00000454402 EHMT2Q96KQ7 1210 aa26■■□□□ 1.75
RFC5-204ENST00000454402 EEA1Q15075 1411 aa25.99■■□□□ 1.75
RFC5-204ENST00000454402 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
RFC5-204ENST00000454402 ERCC6L2Q5T890 1561 aa25.97■■□□□ 1.75
RFC5-204ENST00000454402 PRXQ9BXM0 1461 aa25.96■■□□□ 1.75
RFC5-204ENST00000454402 KIAA0586Q9BVV6 1533 aa25.95■■□□□ 1.75
RFC5-204ENST00000454402 ARAP1Q96P48 1450 aa25.95■■□□□ 1.74
RFC5-204ENST00000454402 PRG4Q92954 1404 aaPredicted RBP25.94■■□□□ 1.74
RFC5-204ENST00000454402 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
RFC5-204ENST00000454402 TTBK1Q5TCY1 1321 aaPredicted RBP25.86■■□□□ 1.73
RFC5-204ENST00000454402 IQGAP2Q13576 1575 aa25.86■■□□□ 1.73
RFC5-204ENST00000454402 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
RFC5-204ENST00000454402 CTTNBP2Q8WZ74 1663 aa25.8■■□□□ 1.72
RFC5-204ENST00000454402 KIF21BO75037 1637 aa25.74■■□□□ 1.71
RFC5-204ENST00000454402 UBTFP17480 764 aaKnown RBP25.72■■□□□ 1.71
RFC5-204ENST00000454402 CARMIL2Q6F5E8 1435 aa25.72■■□□□ 1.71
RFC5-204ENST00000454402 UGGT2Q9NYU1 1516 aa25.67■■□□□ 1.7
RFC5-204ENST00000454402 DISP1Q96F81 1524 aa25.67■■□□□ 1.7
RFC5-204ENST00000454402 GOLGA3Q08378 1498 aa25.66■■□□□ 1.7
RFC5-204ENST00000454402 P3H3Q8IVL6 736 aa25.66■■□□□ 1.7
RFC5-204ENST00000454402 PTPRGP23470 1445 aa25.63■■□□□ 1.69
RFC5-204ENST00000454402 TNIKQ9UKE5 1360 aa25.62■■□□□ 1.69
RFC5-204ENST00000454402 KIAA0556O60303 1618 aa25.62■■□□□ 1.69
RFC5-204ENST00000454402 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.67
RFC5-204ENST00000454402 ADCY10Q96PN6 1610 aa25.48■■□□□ 1.67
RFC5-204ENST00000454402 NPM1P06748 294 aaKnown RBP eCLIP25.48■■□□□ 1.67
RFC5-204ENST00000454402 SAMD9Q5K651 1589 aa25.45■■□□□ 1.66
RFC5-204ENST00000454402 FHOD3Q2V2M9 1422 aa25.44■■□□□ 1.66
RFC5-204ENST00000454402 UACAQ9BZF9 1416 aa25.43■■□□□ 1.66
RFC5-204ENST00000454402 PLB1Q6P1J6 1458 aa25.41■■□□□ 1.66
RFC5-204ENST00000454402 LOC105371045A0A1W2PR82 267 aa25.4■■□□□ 1.66
RFC5-204ENST00000454402 ARID3CA6NKF2 412 aa25.39■■□□□ 1.66
RFC5-204ENST00000454402 ABCC2Q92887 1545 aa25.36■■□□□ 1.65
RFC5-204ENST00000454402 EFCAB5A4FU69 1503 aa25.35■■□□□ 1.65
RFC5-204ENST00000454402 UHRF1BP1LA0JNW5 1464 aa25.32■■□□□ 1.64
RFC5-204ENST00000454402 ARHGAP35Q9NRY4 1499 aa25.31■■□□□ 1.64
RFC5-204ENST00000454402 ABCA8O94911 1581 aa25.3■■□□□ 1.64
RFC5-204ENST00000454402 ATP1B4Q9UN42 357 aaPredicted RBP25.26■■□□□ 1.63
RFC5-204ENST00000454402 ZCCHC11Q5TAX3 1644 aaKnown RBP25.25■■□□□ 1.63
RFC5-204ENST00000454402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.23■■□□□ 1.63
RFC5-204ENST00000454402 CLIP1P30622 1438 aa25.23■■□□□ 1.63
RFC5-204ENST00000454402 HNRNPUL2Q1KMD3 747 aaKnown RBP25.23■■□□□ 1.63
RFC5-204ENST00000454402 RAPGEF6Q8TEU7 1601 aa25.23■■□□□ 1.63
RFC5-204ENST00000454402 MAPKBP1O60336 1514 aa25.22■■□□□ 1.63
RFC5-204ENST00000454402 KDM5BQ9UGL1 1544 aa25.22■■□□□ 1.63
RFC5-204ENST00000454402 ASXL2Q76L83 1435 aa25.21■■□□□ 1.63
RFC5-204ENST00000454402 FAM69CQ0P6D2 419 aa25.2■■□□□ 1.63
RFC5-204ENST00000454402 CEP162Q5TB80 1403 aa25.16■■□□□ 1.62
RFC5-204ENST00000454402 FMN1Q68DA7 1419 aa25.15■■□□□ 1.62
RFC5-204ENST00000454402 ATP10BO94823 1461 aa25.13■■□□□ 1.61
RFC5-204ENST00000454402 NUP153P49790 1475 aaKnown RBP25.13■■□□□ 1.61
RFC5-204ENST00000454402 ABCC10Q5T3U5 1492 aa25.13■■□□□ 1.61
RFC5-204ENST00000454402 KCNH8Q96L42 1107 aa25.13■■□□□ 1.61
RFC5-204ENST00000454402 DIP2BQ9P265 1576 aa25.12■■□□□ 1.61
RFC5-204ENST00000454402 KIF13AQ9H1H9 1805 aa25.11■■□□□ 1.61
RFC5-204ENST00000454402 WDR7Q9Y4E6 1490 aa25.07■■□□□ 1.6
RFC5-204ENST00000454402 CDK13Q14004 1512 aaKnown RBP25.05■■□□□ 1.6
RFC5-204ENST00000454402 HECW1Q76N89 1606 aa25.04■■□□□ 1.6
RFC5-204ENST00000454402 PCF11O94913 1555 aaKnown RBP25.03■■□□□ 1.6
RFC5-204ENST00000454402 EPRSP07814 1512 aaKnown RBP25.03■■□□□ 1.6
RFC5-204ENST00000454402 TSPOAP1O95153 1857 aa25■■□□□ 1.59
RFC5-204ENST00000454402 PLEKHD1A6NEE1 506 aa24.97■■□□□ 1.59
RFC5-204ENST00000454402 CASKIN1Q8WXD9 1431 aa24.97■■□□□ 1.59
RFC5-204ENST00000454402 GLI2P10070 1586 aa24.93■■□□□ 1.58
RFC5-204ENST00000454402 LRRIQ1Q96JM4 1722 aa24.92■■□□□ 1.58
RFC5-204ENST00000454402 FYCO1Q9BQS8 1478 aa24.91■■□□□ 1.58
RFC5-204ENST00000454402 CDK11AQ9UQ88 783 aaPredicted RBP24.88■■□□□ 1.57
RFC5-204ENST00000454402 CD109Q6YHK3 1445 aa24.87■■□□□ 1.57
RFC5-204ENST00000454402 MAP3K4Q9Y6R4 1608 aa24.86■■□□□ 1.57
RFC5-204ENST00000454402 CCDC18Q5T9S5 1454 aa24.85■■□□□ 1.57
RFC5-204ENST00000454402 PPRC1Q5VV67 1664 aaKnown RBP24.82■■□□□ 1.56
RFC5-204ENST00000454402 CFAP43Q8NDM7 1665 aa24.8■■□□□ 1.56
RFC5-204ENST00000454402 VPS8Q8N3P4 1428 aa24.8■■□□□ 1.56
RFC5-204ENST00000454402 ABCA9Q8IUA7 1624 aa24.78■■□□□ 1.56
RFC5-204ENST00000454402 TROQ12816 1431 aaPredicted RBP24.77■■□□□ 1.56
RFC5-204ENST00000454402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.76■■□□□ 1.555e-6■□□□□ 9.5
RFC5-204ENST00000454402 MAGI3Q5TCQ9 1506 aa24.76■■□□□ 1.55
RFC5-204ENST00000454402 TEX14Q8IWB6 1497 aa24.75■■□□□ 1.55
RFC5-204ENST00000454402 KIF14Q15058 1648 aa24.75■■□□□ 1.55
RFC5-204ENST00000454402 TTC37Q6PGP7 1564 aa24.75■■□□□ 1.55
RFC5-204ENST00000454402 KDM6BO15054 1643 aa24.73■■□□□ 1.55
RFC5-204ENST00000454402 MTUS2Q5JR59 1369 aa24.7■■□□□ 1.55
RFC5-204ENST00000454402 COL17A1Q9UMD9 1497 aaPredicted RBP24.63■■□□□ 1.53
RFC5-204ENST00000454402 APLP2Q06481 763 aa24.62■■□□□ 1.53
RFC5-204ENST00000454402 TIAM1Q13009 1591 aa24.62■■□□□ 1.53
RFC5-204ENST00000454402 FANCAO15360 1455 aa24.61■■□□□ 1.53
RFC5-204ENST00000454402 MYO5CQ9NQX4 1742 aa24.59■■□□□ 1.53
RFC5-204ENST00000454402 PLCH2O75038 1416 aa24.59■■□□□ 1.53
RFC5-204ENST00000454402 ARHGAP5Q13017 1502 aa24.58■■□□□ 1.53
RFC5-204ENST00000454402 EHBP1L1Q8N3D4 1523 aa24.58■■□□□ 1.53
RFC5-204ENST00000454402 KANK4Q5T7N3 995 aaPredicted RBP24.56■■□□□ 1.52
RFC5-204ENST00000454402 NEO1Q92859 1461 aa24.56■■□□□ 1.52
RFC5-204ENST00000454402 AKNAQ7Z591 1439 aa24.55■■□□□ 1.52
RFC5-204ENST00000454402 RAPGEF3O95398 923 aa24.55■■□□□ 1.52
RFC5-204ENST00000454402 EFCAB2Q5VUJ9 269 aa24.54■■□□□ 1.52
RFC5-204ENST00000454402 ZNF777Q9ULD5 760 aaPredicted RBP24.54■■□□□ 1.52
RFC5-204ENST00000454402 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
RFC5-204ENST00000454402 CFAP74Q9C0B2 1584 aa24.52■■□□□ 1.52
RFC5-204ENST00000454402 LRRC9Q6ZRR7 1453 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms