RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
NCKIPSD-208ENST00000454134 PRG4Q92954 1404 aaPredicted RBP28.34■■■□□ 2.13
NCKIPSD-208ENST00000454134 CARMIL1Q5VZK9 1371 aa28.27■■■□□ 2.12
NCKIPSD-208ENST00000454134 KIAA0586Q9BVV6 1533 aa28.23■■■□□ 2.11
NCKIPSD-208ENST00000454134 RAPGEF2Q9Y4G8 1499 aa28.04■■■□□ 2.08
NCKIPSD-208ENST00000454134 IQGAP2Q13576 1575 aa28.02■■■□□ 2.08
NCKIPSD-208ENST00000454134 TTBK1Q5TCY1 1321 aaPredicted RBP27.97■■■□□ 2.07
NCKIPSD-208ENST00000454134 ADCY10Q96PN6 1610 aa27.96■■■□□ 2.07
NCKIPSD-208ENST00000454134 CARMIL2Q6F5E8 1435 aa27.94■■■□□ 2.06
NCKIPSD-208ENST00000454134 PTPRGP23470 1445 aa27.93■■■□□ 2.06
NCKIPSD-208ENST00000454134 NPM1P06748 294 aaKnown RBP eCLIP27.93■■■□□ 2.06
NCKIPSD-208ENST00000454134 TNIKQ9UKE5 1360 aa27.89■■■□□ 2.06
NCKIPSD-208ENST00000454134 DISP1Q96F81 1524 aa27.87■■■□□ 2.05
NCKIPSD-208ENST00000454134 KIF13AQ9H1H9 1805 aa27.85■■■□□ 2.05
NCKIPSD-208ENST00000454134 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
NCKIPSD-208ENST00000454134 UGGT2Q9NYU1 1516 aa27.84■■■□□ 2.05
NCKIPSD-208ENST00000454134 MAPKBP1O60336 1514 aa27.82■■■□□ 2.04
NCKIPSD-208ENST00000454134 CTTNBP2Q8WZ74 1663 aa27.8■■■□□ 2.04
NCKIPSD-208ENST00000454134 ABCC10Q5T3U5 1492 aa27.78■■■□□ 2.04
NCKIPSD-208ENST00000454134 FAM69CQ0P6D2 419 aa27.78■■■□□ 2.04
NCKIPSD-208ENST00000454134 KIAA0556O60303 1618 aa27.76■■■□□ 2.03
NCKIPSD-208ENST00000454134 DIP2BQ9P265 1576 aa27.73■■■□□ 2.03
NCKIPSD-208ENST00000454134 CSRNP3Q8WYN3 585 aa27.73■■■□□ 2.03
NCKIPSD-208ENST00000454134 ABCC2Q92887 1545 aa27.72■■■□□ 2.03
NCKIPSD-208ENST00000454134 UACAQ9BZF9 1416 aa27.72■■■□□ 2.03
NCKIPSD-208ENST00000454134 UHRF1BP1LA0JNW5 1464 aa27.7■■■□□ 2.02
NCKIPSD-208ENST00000454134 GOLGA3Q08378 1498 aa27.64■■■□□ 2.01
NCKIPSD-208ENST00000454134 FAM9AQ8IZU1 332 aaPredicted RBP27.63■■■□□ 2.01
NCKIPSD-208ENST00000454134 ASXL2Q76L83 1435 aa27.62■■■□□ 2.01
NCKIPSD-208ENST00000454134 EEA1Q15075 1411 aa27.61■■■□□ 2.01
NCKIPSD-208ENST00000454134 PLB1Q6P1J6 1458 aa27.57■■■□□ 2
NCKIPSD-208ENST00000454134 KDM5BQ9UGL1 1544 aa27.57■■■□□ 2
NCKIPSD-208ENST00000454134 TSPOAP1O95153 1857 aa27.56■■■□□ 2
NCKIPSD-208ENST00000454134 ZCCHC11Q5TAX3 1644 aaKnown RBP27.54■■■□□ 2
NCKIPSD-208ENST00000454134 P3H3Q8IVL6 736 aa27.53■■■□□ 2
NCKIPSD-208ENST00000454134 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
NCKIPSD-208ENST00000454134 ABCA8O94911 1581 aa27.49■■□□□ 1.99
NCKIPSD-208ENST00000454134 GLI2P10070 1586 aa27.46■■□□□ 1.99
NCKIPSD-208ENST00000454134 RANGAP1P46060 587 aaPredicted RBP27.44■■□□□ 1.98
NCKIPSD-208ENST00000454134 EPRSP07814 1512 aaKnown RBP27.44■■□□□ 1.98
NCKIPSD-208ENST00000454134 SAMD9Q5K651 1589 aa27.42■■□□□ 1.98
NCKIPSD-208ENST00000454134 KDM6BO15054 1643 aa27.41■■□□□ 1.98
NCKIPSD-208ENST00000454134 KIF21BO75037 1637 aa27.39■■□□□ 1.98
NCKIPSD-208ENST00000454134 PPRC1Q5VV67 1664 aaKnown RBP27.39■■□□□ 1.97
NCKIPSD-208ENST00000454134 WDR7Q9Y4E6 1490 aa27.38■■□□□ 1.97
NCKIPSD-208ENST00000454134 ARID3CA6NKF2 412 aa27.37■■□□□ 1.97
NCKIPSD-208ENST00000454134 EHMT2Q96KQ7 1210 aa27.36■■□□□ 1.97
NCKIPSD-208ENST00000454134 MAP3K4Q9Y6R4 1608 aa27.34■■□□□ 1.97
NCKIPSD-208ENST00000454134 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
NCKIPSD-208ENST00000454134 KCNH8Q96L42 1107 aa27.31■■□□□ 1.96
NCKIPSD-208ENST00000454134 FHOD3Q2V2M9 1422 aa27.29■■□□□ 1.96
NCKIPSD-208ENST00000454134 ATP10BO94823 1461 aa27.28■■□□□ 1.96
NCKIPSD-208ENST00000454134 RAPGEF6Q8TEU7 1601 aa27.26■■□□□ 1.95
NCKIPSD-208ENST00000454134 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
NCKIPSD-208ENST00000454134 TEX14Q8IWB6 1497 aa27.23■■□□□ 1.95
NCKIPSD-208ENST00000454134 COL17A1Q9UMD9 1497 aaPredicted RBP27.2■■□□□ 1.95
NCKIPSD-208ENST00000454134 CD109Q6YHK3 1445 aa27.19■■□□□ 1.94
NCKIPSD-208ENST00000454134 EFCAB5A4FU69 1503 aa27.19■■□□□ 1.94
NCKIPSD-208ENST00000454134 CFAP43Q8NDM7 1665 aa27.17■■□□□ 1.94
NCKIPSD-208ENST00000454134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.17■■□□□ 1.94
NCKIPSD-208ENST00000454134 HNRNPUL2Q1KMD3 747 aaKnown RBP27.17■■□□□ 1.94
NCKIPSD-208ENST00000454134 NUP153P49790 1475 aaKnown RBP27.17■■□□□ 1.94
NCKIPSD-208ENST00000454134 MAGI3Q5TCQ9 1506 aa27.13■■□□□ 1.93
NCKIPSD-208ENST00000454134 ARHGAP35Q9NRY4 1499 aa27.04■■□□□ 1.92
NCKIPSD-208ENST00000454134 ABCA9Q8IUA7 1624 aa27.04■■□□□ 1.92
NCKIPSD-208ENST00000454134 KDM4FA0A1W2PPD8 638 aa27.03■■□□□ 1.92
NCKIPSD-208ENST00000454134 PLEKHD1A6NEE1 506 aa26.99■■□□□ 1.91
NCKIPSD-208ENST00000454134 CDK13Q14004 1512 aaKnown RBP26.97■■□□□ 1.91
NCKIPSD-208ENST00000454134 ATP1B4Q9UN42 357 aaPredicted RBP26.96■■□□□ 1.91
NCKIPSD-208ENST00000454134 FMN1Q68DA7 1419 aa26.95■■□□□ 1.9
NCKIPSD-208ENST00000454134 ARAP3Q8WWN8 1544 aa26.91■■□□□ 1.9
NCKIPSD-208ENST00000454134 ADGRL1O94910 1474 aa26.88■■□□□ 1.89
NCKIPSD-208ENST00000454134 HECW1Q76N89 1606 aa26.88■■□□□ 1.89
NCKIPSD-208ENST00000454134 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.86■■□□□ 1.89
NCKIPSD-208ENST00000454134 NEO1Q92859 1461 aa26.86■■□□□ 1.89
NCKIPSD-208ENST00000454134 PHLDB1Q86UU1 1377 aa26.85■■□□□ 1.89
NCKIPSD-208ENST00000454134 TTC37Q6PGP7 1564 aa26.84■■□□□ 1.89
NCKIPSD-208ENST00000454134 RAPGEF3O95398 923 aa26.83■■□□□ 1.89
NCKIPSD-208ENST00000454134 LRRIQ1Q96JM4 1722 aa26.76■■□□□ 1.88
NCKIPSD-208ENST00000454134 FANCAO15360 1455 aa26.76■■□□□ 1.87
NCKIPSD-208ENST00000454134 CDK11AQ9UQ88 783 aaPredicted RBP26.75■■□□□ 1.87
NCKIPSD-208ENST00000454134 FRMPD1Q5SYB0 1578 aa26.75■■□□□ 1.87
NCKIPSD-208ENST00000454134 AKNAQ7Z591 1439 aa26.74■■□□□ 1.87
NCKIPSD-208ENST00000454134 PCF11O94913 1555 aaKnown RBP26.74■■□□□ 1.87
NCKIPSD-208ENST00000454134 CLIP1P30622 1438 aa26.73■■□□□ 1.87
NCKIPSD-208ENST00000454134 CFAP74Q9C0B2 1584 aa26.71■■□□□ 1.87
NCKIPSD-208ENST00000454134 CASKIN1Q8WXD9 1431 aa26.71■■□□□ 1.87
NCKIPSD-208ENST00000454134 KIF14Q15058 1648 aa26.7■■□□□ 1.86
NCKIPSD-208ENST00000454134 DENND4BO75064 1496 aaPredicted RBP26.69■■□□□ 1.86
NCKIPSD-208ENST00000454134 TROQ12816 1431 aaPredicted RBP26.69■■□□□ 1.86
NCKIPSD-208ENST00000454134 PLCH2O75038 1416 aa26.68■■□□□ 1.86
NCKIPSD-208ENST00000454134 RICTORQ6R327 1708 aa26.66■■□□□ 1.86
NCKIPSD-208ENST00000454134 CCDC18Q5T9S5 1454 aa26.63■■□□□ 1.85
NCKIPSD-208ENST00000454134 MYO5CQ9NQX4 1742 aa26.63■■□□□ 1.85
NCKIPSD-208ENST00000454134 FYCO1Q9BQS8 1478 aa26.62■■□□□ 1.85
NCKIPSD-208ENST00000454134 SCAPERQ9BY12 1400 aa26.59■■□□□ 1.85
NCKIPSD-208ENST00000454134 EFCAB2Q5VUJ9 269 aa26.59■■□□□ 1.85
NCKIPSD-208ENST00000454134 ARHGEF40Q8TER5 1519 aa26.56■■□□□ 1.84
NCKIPSD-208ENST00000454134 ARHGAP5Q13017 1502 aa26.55■■□□□ 1.84
NCKIPSD-208ENST00000454134 ARID4BQ4LE39 1312 aaPredicted RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms