RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 KIAA0586Q9BVV6 1533 aa24.72■■□□□ 1.55
VPS16-205ENST00000453689 RAPGEF2Q9Y4G8 1499 aa24.72■■□□□ 1.55
VPS16-205ENST00000453689 JPH4Q96JJ6 628 aa24.67■■□□□ 1.54
VPS16-205ENST00000453689 CTTNBP2Q8WZ74 1663 aa24.66■■□□□ 1.54
VPS16-205ENST00000453689 PRG4Q92954 1404 aaPredicted RBP24.66■■□□□ 1.54
VPS16-205ENST00000453689 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
VPS16-205ENST00000453689 IQGAP2Q13576 1575 aa24.63■■□□□ 1.53
VPS16-205ENST00000453689 PRXQ9BXM0 1461 aa24.62■■□□□ 1.53
VPS16-205ENST00000453689 EEA1Q15075 1411 aa24.59■■□□□ 1.53
VPS16-205ENST00000453689 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
VPS16-205ENST00000453689 UGGT2Q9NYU1 1516 aa24.48■■□□□ 1.51
VPS16-205ENST00000453689 FAM9AQ8IZU1 332 aaPredicted RBP24.45■■□□□ 1.5
VPS16-205ENST00000453689 DISP1Q96F81 1524 aa24.44■■□□□ 1.5
VPS16-205ENST00000453689 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
VPS16-205ENST00000453689 KIF21BO75037 1637 aa24.43■■□□□ 1.5
VPS16-205ENST00000453689 KIAA0556O60303 1618 aa24.42■■□□□ 1.5
VPS16-205ENST00000453689 ADCY10Q96PN6 1610 aa24.39■■□□□ 1.5
VPS16-205ENST00000453689 TNIKQ9UKE5 1360 aa24.36■■□□□ 1.49
VPS16-205ENST00000453689 PTPRGP23470 1445 aa24.34■■□□□ 1.49
VPS16-205ENST00000453689 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
VPS16-205ENST00000453689 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
VPS16-205ENST00000453689 TRHP20396 242 aaPredicted RBP24.27■■□□□ 1.48
VPS16-205ENST00000453689 SAMD9Q5K651 1589 aa24.25■■□□□ 1.47
VPS16-205ENST00000453689 KIF13AQ9H1H9 1805 aa24.24■■□□□ 1.47
VPS16-205ENST00000453689 UHRF1BP1LA0JNW5 1464 aa24.2■■□□□ 1.47
VPS16-205ENST00000453689 MAPKBP1O60336 1514 aa24.2■■□□□ 1.46
VPS16-205ENST00000453689 ABCC2Q92887 1545 aa24.2■■□□□ 1.46
VPS16-205ENST00000453689 UACAQ9BZF9 1416 aa24.19■■□□□ 1.46
VPS16-205ENST00000453689 NPM1P06748 294 aaKnown RBP eCLIP24.18■■□□□ 1.46
VPS16-205ENST00000453689 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
VPS16-205ENST00000453689 ABCA8O94911 1581 aa24.14■■□□□ 1.45
VPS16-205ENST00000453689 ZCCHC11Q5TAX3 1644 aaKnown RBP24.13■■□□□ 1.45
VPS16-205ENST00000453689 PLB1Q6P1J6 1458 aa24.12■■□□□ 1.45
VPS16-205ENST00000453689 P3H3Q8IVL6 736 aa24.11■■□□□ 1.45
VPS16-205ENST00000453689 EFCAB5A4FU69 1503 aa24.1■■□□□ 1.45
VPS16-205ENST00000453689 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
VPS16-205ENST00000453689 DIP2BQ9P265 1576 aa24.09■■□□□ 1.45
VPS16-205ENST00000453689 UBTFP17480 764 aaKnown RBP24.09■■□□□ 1.45
VPS16-205ENST00000453689 RANGAP1P46060 587 aaPredicted RBP24.08■■□□□ 1.45
VPS16-205ENST00000453689 ABCC10Q5T3U5 1492 aa24.06■■□□□ 1.44
VPS16-205ENST00000453689 RAPGEF6Q8TEU7 1601 aa24.03■■□□□ 1.44
VPS16-205ENST00000453689 FHOD3Q2V2M9 1422 aa24.03■■□□□ 1.44
VPS16-205ENST00000453689 ASXL2Q76L83 1435 aa24.01■■□□□ 1.43
VPS16-205ENST00000453689 TSPOAP1O95153 1857 aa24■■□□□ 1.43
VPS16-205ENST00000453689 FAM69CQ0P6D2 419 aa23.96■■□□□ 1.43
VPS16-205ENST00000453689 ARHGAP35Q9NRY4 1499 aa23.94■■□□□ 1.42
VPS16-205ENST00000453689 GLI2P10070 1586 aa23.93■■□□□ 1.42
VPS16-205ENST00000453689 ATP10BO94823 1461 aa23.89■■□□□ 1.42
VPS16-205ENST00000453689 WDR7Q9Y4E6 1490 aa23.89■■□□□ 1.42
VPS16-205ENST00000453689 EPRSP07814 1512 aaKnown RBP23.89■■□□□ 1.41
VPS16-205ENST00000453689 PPRC1Q5VV67 1664 aaKnown RBP23.88■■□□□ 1.41
VPS16-205ENST00000453689 NUP153P49790 1475 aaKnown RBP23.87■■□□□ 1.41
VPS16-205ENST00000453689 MAP3K4Q9Y6R4 1608 aa23.87■■□□□ 1.41
VPS16-205ENST00000453689 ARID3CA6NKF2 412 aa23.84■■□□□ 1.41
VPS16-205ENST00000453689 FMN1Q68DA7 1419 aa23.82■■□□□ 1.4
VPS16-205ENST00000453689 CFAP43Q8NDM7 1665 aa23.81■■□□□ 1.4
VPS16-205ENST00000453689 HECW1Q76N89 1606 aa23.8■■□□□ 1.4
VPS16-205ENST00000453689 LRRIQ1Q96JM4 1722 aa23.79■■□□□ 1.4
VPS16-205ENST00000453689 CLIP1P30622 1438 aa23.75■■□□□ 1.39
VPS16-205ENST00000453689 CDK13Q14004 1512 aaKnown RBP23.74■■□□□ 1.39
VPS16-205ENST00000453689 KDM6BO15054 1643 aa23.73■■□□□ 1.39
VPS16-205ENST00000453689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
VPS16-205ENST00000453689 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
VPS16-205ENST00000453689 KCNH8Q96L42 1107 aa23.72■■□□□ 1.39
VPS16-205ENST00000453689 PCF11O94913 1555 aaKnown RBP23.72■■□□□ 1.39
VPS16-205ENST00000453689 ABCA9Q8IUA7 1624 aa23.71■■□□□ 1.39
VPS16-205ENST00000453689 TEX14Q8IWB6 1497 aa23.67■■□□□ 1.38
VPS16-205ENST00000453689 ATP1B4Q9UN42 357 aaPredicted RBP23.65■■□□□ 1.38
VPS16-205ENST00000453689 CEP162Q5TB80 1403 aa23.65■■□□□ 1.38
VPS16-205ENST00000453689 CD109Q6YHK3 1445 aa23.65■■□□□ 1.38
VPS16-205ENST00000453689 LOC105371045A0A1W2PR82 267 aa23.64■■□□□ 1.37
VPS16-205ENST00000453689 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.37
VPS16-205ENST00000453689 CASKIN1Q8WXD9 1431 aa23.63■■□□□ 1.37
VPS16-205ENST00000453689 PLEKHD1A6NEE1 506 aa23.61■■□□□ 1.37
VPS16-205ENST00000453689 FYCO1Q9BQS8 1478 aa23.61■■□□□ 1.37
VPS16-205ENST00000453689 TTC37Q6PGP7 1564 aa23.57■■□□□ 1.36
VPS16-205ENST00000453689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.57■■□□□ 1.36
VPS16-205ENST00000453689 CCDC18Q5T9S5 1454 aa23.56■■□□□ 1.36
VPS16-205ENST00000453689 KIF14Q15058 1648 aa23.53■■□□□ 1.36
VPS16-205ENST00000453689 COL17A1Q9UMD9 1497 aaPredicted RBP23.53■■□□□ 1.36
VPS16-205ENST00000453689 MYO5CQ9NQX4 1742 aa23.52■■□□□ 1.36
VPS16-205ENST00000453689 CDK11AQ9UQ88 783 aaPredicted RBP23.5■■□□□ 1.35
VPS16-205ENST00000453689 TROQ12816 1431 aaPredicted RBP23.5■■□□□ 1.35
VPS16-205ENST00000453689 CFAP74Q9C0B2 1584 aa23.48■■□□□ 1.35
VPS16-205ENST00000453689 NEO1Q92859 1461 aa23.44■■□□□ 1.34
VPS16-205ENST00000453689 ARAP3Q8WWN8 1544 aa23.43■■□□□ 1.34
VPS16-205ENST00000453689 CDC42BPBQ9Y5S2 1711 aa23.4■■□□□ 1.34
VPS16-205ENST00000453689 FANCAO15360 1455 aa23.4■■□□□ 1.34
VPS16-205ENST00000453689 PHLDB1Q86UU1 1377 aa23.4■■□□□ 1.34
VPS16-205ENST00000453689 CDC42BPAQ5VT25 1732 aa23.39■■□□□ 1.33
VPS16-205ENST00000453689 RICTORQ6R327 1708 aa23.37■■□□□ 1.33
VPS16-205ENST00000453689 PLCH2O75038 1416 aa23.37■■□□□ 1.33
VPS16-205ENST00000453689 VPS8Q8N3P4 1428 aa23.37■■□□□ 1.33
VPS16-205ENST00000453689 PREX2Q70Z35 1606 aa23.37■■□□□ 1.33
VPS16-205ENST00000453689 FRMPD1Q5SYB0 1578 aa23.36■■□□□ 1.33
VPS16-205ENST00000453689 AKNAQ7Z591 1439 aa23.34■■□□□ 1.33
VPS16-205ENST00000453689 ARHGAP5Q13017 1502 aa23.31■■□□□ 1.32
VPS16-205ENST00000453689 TIAM1Q13009 1591 aa23.31■■□□□ 1.32
VPS16-205ENST00000453689 EHBP1L1Q8N3D4 1523 aa23.3■■□□□ 1.32
VPS16-205ENST00000453689 MTUS2Q5JR59 1369 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms