RNA–Protein interactions for RNA: ENST00000453535.1

GSK3A-203, Transcript of glycogen synthase kinase 3 alpha, humanhuman

TSL 5

Gene GSK3A, Length 1,897 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-203ENST00000453535 VPS8Q8N3P4 1428 aa43.86■■■■■ 4.61
GSK3A-203ENST00000453535 RANGAP1P46060 587 aaPredicted RBP43.84■■■■■ 4.61
GSK3A-203ENST00000453535 CTTNBP2Q8WZ74 1663 aa43.77■■■■■ 4.6
GSK3A-203ENST00000453535 SYNJ2O15056 1496 aa43.73■■■■■ 4.59
GSK3A-203ENST00000453535 GRIN2AQ12879 1464 aa43.7■■■■■ 4.59
GSK3A-203ENST00000453535 CHMP7Q8WUX9 453 aaPredicted RBP43.64■■■■■ 4.58
GSK3A-203ENST00000453535 ARAP1Q96P48 1450 aa43.63■■■■■ 4.57
GSK3A-203ENST00000453535 FBLN2P98095 1184 aa43.61■■■■■ 4.57
GSK3A-203ENST00000453535 ARHGAP35Q9NRY4 1499 aa43.54■■■■■ 4.56
GSK3A-203ENST00000453535 APLP2Q06481 763 aa43.49■■■■■ 4.55
GSK3A-203ENST00000453535 TTBK1Q5TCY1 1321 aaPredicted RBP43.49■■■■■ 4.55
GSK3A-203ENST00000453535 CEP170Q5SW79 1584 aa43.47■■■■■ 4.55
GSK3A-203ENST00000453535 CHD1O14646 1710 aa43.47■■■■■ 4.55
GSK3A-203ENST00000453535 IQGAP2Q13576 1575 aa43.43■■■■■ 4.54
GSK3A-203ENST00000453535 NUP160Q12769 1436 aa43.39■■■■■ 4.54
GSK3A-203ENST00000453535 KIAA0586Q9BVV6 1533 aa43.38■■■■■ 4.54
GSK3A-203ENST00000453535 EFCAB5A4FU69 1503 aa43.31■■■■■ 4.52
GSK3A-203ENST00000453535 P3H3Q8IVL6 736 aa43.3■■■■■ 4.52
GSK3A-203ENST00000453535 SAMD9Q5K651 1589 aa43.28■■■■■ 4.52
GSK3A-203ENST00000453535 FHOD3Q2V2M9 1422 aa43.22■■■■■ 4.51
GSK3A-203ENST00000453535 UGGT2Q9NYU1 1516 aa43.21■■■■■ 4.51
GSK3A-203ENST00000453535 ZEB1P37275 1124 aaPredicted RBP43.19■■■■■ 4.5
GSK3A-203ENST00000453535 DISP1Q96F81 1524 aa43.06■■■■■ 4.48
GSK3A-203ENST00000453535 JPH4Q96JJ6 628 aa43.04■■■■■ 4.48
GSK3A-203ENST00000453535 KIAA0556O60303 1618 aa43.02■■■■■ 4.48
GSK3A-203ENST00000453535 KANK4Q5T7N3 995 aaPredicted RBP42.99■■■■■ 4.47
GSK3A-203ENST00000453535 MAP3K1Q13233 1512 aa42.97■■■■■ 4.47
GSK3A-203ENST00000453535 PCF11O94913 1555 aaKnown RBP42.94■■■■■ 4.46
GSK3A-203ENST00000453535 FMN1Q68DA7 1419 aa42.92■■■■■ 4.46
GSK3A-203ENST00000453535 CLASP1Q7Z460 1538 aa42.91■■■■■ 4.46
GSK3A-203ENST00000453535 SHROOM2Q13796 1616 aa42.86■■■■■ 4.45
GSK3A-203ENST00000453535 TIAM1Q13009 1591 aa42.84■■■■■ 4.45
GSK3A-203ENST00000453535 CARMIL2Q6F5E8 1435 aa42.81■■■■■ 4.44
GSK3A-203ENST00000453535 PRG4Q92954 1404 aaPredicted RBP42.81■■■■■ 4.44
GSK3A-203ENST00000453535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.81■■■■■ 4.44
GSK3A-203ENST00000453535 CASKIN1Q8WXD9 1431 aa42.81■■■■■ 4.44
GSK3A-203ENST00000453535 FYCO1Q9BQS8 1478 aa42.78■■■■■ 4.44
GSK3A-203ENST00000453535 CCER1Q8TC90 406 aaPredicted RBP42.74■■■■■ 4.43
GSK3A-203ENST00000453535 ATP1B4Q9UN42 357 aaPredicted RBP42.74■■■■■ 4.43
GSK3A-203ENST00000453535 ERCC6L2Q5T890 1561 aa42.68■■■■■ 4.42
GSK3A-203ENST00000453535 HNRNPUL2Q1KMD3 747 aaKnown RBP42.68■■■■■ 4.42
GSK3A-203ENST00000453535 RRBP1Q9P2E9 1410 aaKnown RBP42.67■■■■■ 4.42
GSK3A-203ENST00000453535 LRRC9Q6ZRR7 1453 aa42.67■■■■■ 4.42
GSK3A-203ENST00000453535 CFAP43Q8NDM7 1665 aa42.67■■■■■ 4.42
GSK3A-203ENST00000453535 OSCARQ8IYS5 282 aa42.66■■■■■ 4.42
GSK3A-203ENST00000453535 LRRIQ1Q96JM4 1722 aa42.66■■■■■ 4.42
GSK3A-203ENST00000453535 HECW1Q76N89 1606 aa42.56■■■■■ 4.4
GSK3A-203ENST00000453535 RAPGEF6Q8TEU7 1601 aa42.54■■■■■ 4.4
GSK3A-203ENST00000453535 PLB1Q6P1J6 1458 aa42.53■■■■■ 4.4
GSK3A-203ENST00000453535 CCNB3Q8WWL7 1395 aa42.49■■■■■ 4.39
GSK3A-203ENST00000453535 PTPRGP23470 1445 aa42.47■■■■■ 4.39
GSK3A-203ENST00000453535 NUP153P49790 1475 aaKnown RBP42.44■■■■■ 4.38
GSK3A-203ENST00000453535 EPRSP07814 1512 aaKnown RBP42.43■■■■■ 4.38
GSK3A-203ENST00000453535 ABCA8O94911 1581 aa42.41■■■■■ 4.38
GSK3A-203ENST00000453535 ARID3CA6NKF2 412 aa42.41■■■■■ 4.38
GSK3A-203ENST00000453535 CDK13Q14004 1512 aaKnown RBP42.4■■■■■ 4.38
GSK3A-203ENST00000453535 CCDC18Q5T9S5 1454 aa42.39■■■■■ 4.38
GSK3A-203ENST00000453535 PHLDB1Q86UU1 1377 aa42.33■■■■■ 4.37
GSK3A-203ENST00000453535 MAGI3Q5TCQ9 1506 aa42.27■■■■■ 4.36
GSK3A-203ENST00000453535 UACAQ9BZF9 1416 aa42.23■■■■■ 4.35
GSK3A-203ENST00000453535 MTUS2Q5JR59 1369 aa42.23■■■■■ 4.35
GSK3A-203ENST00000453535 EHBP1L1Q8N3D4 1523 aa42.16■■■■■ 4.34
GSK3A-203ENST00000453535 ATP10BO94823 1461 aa42.13■■■■■ 4.34
GSK3A-203ENST00000453535 ABCC2Q92887 1545 aa42.13■■■■■ 4.33
GSK3A-203ENST00000453535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP42.08■■■■■ 4.33
GSK3A-203ENST00000453535 SUPT6HQ7KZ85 1726 aaKnown RBP42.05■■■■■ 4.32
GSK3A-203ENST00000453535 ITGAEP38570 1179 aa42.02■■■■■ 4.32
GSK3A-203ENST00000453535 NCOA2Q15596 1464 aa42.02■■■■■ 4.32
GSK3A-203ENST00000453535 ARHGEF11O15085 1522 aa42.01■■■■■ 4.32
GSK3A-203ENST00000453535 FAM50AQ14320 339 aaKnown RBP42.01■■■■■ 4.32
GSK3A-203ENST00000453535 UHRF1BP1LA0JNW5 1464 aa42.01■■■■■ 4.32
GSK3A-203ENST00000453535 CDK11AQ9UQ88 783 aaPredicted RBP42■■■■■ 4.31
GSK3A-203ENST00000453535 FGD6Q6ZV73 1430 aa41.97■■■■■ 4.31
GSK3A-203ENST00000453535 ADCY10Q96PN6 1610 aa41.96■■■■■ 4.31
GSK3A-203ENST00000453535 TROQ12816 1431 aaPredicted RBP41.94■■■■■ 4.3
GSK3A-203ENST00000453535 DHX57Q6P158 1386 aaKnown RBP41.92■■■■■ 4.3
GSK3A-203ENST00000453535 CLSPNQ9HAW4 1339 aa41.92■■■■■ 4.3
GSK3A-203ENST00000453535 MYOM3Q5VTT5 1437 aa41.89■■■■■ 4.3
GSK3A-203ENST00000453535 ZCCHC11Q5TAX3 1644 aaKnown RBP41.89■■■■■ 4.3
GSK3A-203ENST00000453535 KDM5BQ9UGL1 1544 aa41.88■■■■■ 4.29
GSK3A-203ENST00000453535 PLEKHD1A6NEE1 506 aa41.86■■■■■ 4.29
GSK3A-203ENST00000453535 RIMBP3CA6NJZ7 1639 aa41.86■■■■■ 4.29
GSK3A-203ENST00000453535 RIMBP3BA6NNM3 1639 aa41.86■■■■■ 4.29
GSK3A-203ENST00000453535 RIMBP3Q9UFD9 1639 aa41.86■■■■■ 4.29
GSK3A-203ENST00000453535 KIF14Q15058 1648 aa41.84■■■■■ 4.29
GSK3A-203ENST00000453535 SETD5Q9C0A6 1442 aa41.82■■■■■ 4.28
GSK3A-203ENST00000453535 RAB3GAP2Q9H2M9 1393 aa41.79■■■■■ 4.28
GSK3A-203ENST00000453535 PTPN23Q9H3S7 1636 aa41.66■■■■■ 4.26
GSK3A-203ENST00000453535 ABCC10Q5T3U5 1492 aa41.63■■■■■ 4.26
GSK3A-203ENST00000453535 CYB5RLQ6IPT4 315 aa41.63■■■■■ 4.25
GSK3A-203ENST00000453535 TCOF1Q13428 1488 aaKnown RBP41.63■■■■■ 4.25
GSK3A-203ENST00000453535 MIA2Q96PC5 1412 aa41.61■■■■■ 4.25
GSK3A-203ENST00000453535 GPATCH8Q9UKJ3 1502 aaKnown RBP41.57■■■■■ 4.25
GSK3A-203ENST00000453535 CDC42BPAQ5VT25 1732 aa41.55■■■■■ 4.24
GSK3A-203ENST00000453535 PTPRKQ15262 1439 aa41.54■■■■■ 4.24
GSK3A-203ENST00000453535 KCNH8Q96L42 1107 aa41.54■■■■■ 4.24
GSK3A-203ENST00000453535 ITSN2Q9NZM3 1697 aa41.54■■■■■ 4.24
GSK3A-203ENST00000453535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.51■■■■■ 4.244e-8■■■■■ 34.6
GSK3A-203ENST00000453535 TTC37Q6PGP7 1564 aa41.51■■■■■ 4.23
GSK3A-203ENST00000453535 WDR7Q9Y4E6 1490 aa41.5■■■■■ 4.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms