RNA–Protein interactions for RNA: ENST00000453470.2

LINC00297-201, long intergenic non-protein coding RNA 297, humanhuman

TSL 2 BASIC

Gene LINC00297, Length 913 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00297-201ENST00000453470 GRIN2AQ12879 1464 aa16■□□□□ 0.15
LINC00297-201ENST00000453470 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC00297-201ENST00000453470 NUP160Q12769 1436 aa15.97■□□□□ 0.15
LINC00297-201ENST00000453470 ABCA5Q8WWZ7 1642 aa15.95■□□□□ 0.14
LINC00297-201ENST00000453470 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
LINC00297-201ENST00000453470 PBRM1Q86U86 1689 aa15.94■□□□□ 0.14
LINC00297-201ENST00000453470 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
LINC00297-201ENST00000453470 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
LINC00297-201ENST00000453470 ERICH3Q5RHP9 1530 aa15.9■□□□□ 0.14
LINC00297-201ENST00000453470 PRG4Q92954 1404 aaPredicted RBP15.9■□□□□ 0.14
LINC00297-201ENST00000453470 CEP170Q5SW79 1584 aa15.88■□□□□ 0.13
LINC00297-201ENST00000453470 FAM69CQ0P6D2 419 aa15.87■□□□□ 0.13
LINC00297-201ENST00000453470 ERCC6L2Q5T890 1561 aa15.86■□□□□ 0.13
LINC00297-201ENST00000453470 ADAMTS12P58397 1594 aa15.85■□□□□ 0.13
LINC00297-201ENST00000453470 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
LINC00297-201ENST00000453470 IGF1RP08069 1367 aa15.83■□□□□ 0.12
LINC00297-201ENST00000453470 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
LINC00297-201ENST00000453470 KIF27Q86VH2 1401 aa15.77■□□□□ 0.12
LINC00297-201ENST00000453470 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
LINC00297-201ENST00000453470 NPM3O75607 178 aaKnown RBP15.76■□□□□ 0.11
LINC00297-201ENST00000453470 KIAA0586Q9BVV6 1533 aa15.74■□□□□ 0.11
LINC00297-201ENST00000453470 CARMIL1Q5VZK9 1371 aa15.72■□□□□ 0.11
LINC00297-201ENST00000453470 TTBK1Q5TCY1 1321 aaPredicted RBP15.71■□□□□ 0.11
LINC00297-201ENST00000453470 PTPRGP23470 1445 aa15.71■□□□□ 0.11
LINC00297-201ENST00000453470 ABCC10Q5T3U5 1492 aa15.71■□□□□ 0.1
LINC00297-201ENST00000453470 CARMIL2Q6F5E8 1435 aa15.66■□□□□ 0.1
LINC00297-201ENST00000453470 TNIKQ9UKE5 1360 aa15.63■□□□□ 0.09
LINC00297-201ENST00000453470 MAPKBP1O60336 1514 aa15.62■□□□□ 0.09
LINC00297-201ENST00000453470 RUSC2Q8N2Y8 1516 aa15.6■□□□□ 0.09
LINC00297-201ENST00000453470 RNF216Q9NWF9 866 aaPredicted RBP15.59■□□□□ 0.09
LINC00297-201ENST00000453470 KDM4FA0A1W2PPD8 638 aa15.57■□□□□ 0.08
LINC00297-201ENST00000453470 KIF13AQ9H1H9 1805 aa15.56■□□□□ 0.08
LINC00297-201ENST00000453470 CUL7Q14999 1698 aa15.55■□□□□ 0.08
LINC00297-201ENST00000453470 FAM9AQ8IZU1 332 aaPredicted RBP15.55■□□□□ 0.08
LINC00297-201ENST00000453470 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
LINC00297-201ENST00000453470 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
LINC00297-201ENST00000453470 UACAQ9BZF9 1416 aa15.52■□□□□ 0.08
LINC00297-201ENST00000453470 DIP2BQ9P265 1576 aa15.51■□□□□ 0.07
LINC00297-201ENST00000453470 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
LINC00297-201ENST00000453470 ABCC2Q92887 1545 aa15.51■□□□□ 0.07
LINC00297-201ENST00000453470 ASXL2Q76L83 1435 aa15.51■□□□□ 0.07
LINC00297-201ENST00000453470 UHRF1BP1LA0JNW5 1464 aa15.48■□□□□ 0.07
LINC00297-201ENST00000453470 RAPGEF2Q9Y4G8 1499 aa15.48■□□□□ 0.07
LINC00297-201ENST00000453470 KDM6BO15054 1643 aa15.46■□□□□ 0.06
LINC00297-201ENST00000453470 KCNH8Q96L42 1107 aa15.44■□□□□ 0.06
LINC00297-201ENST00000453470 IQGAP2Q13576 1575 aa15.44■□□□□ 0.06
LINC00297-201ENST00000453470 DISP1Q96F81 1524 aa15.42■□□□□ 0.06
LINC00297-201ENST00000453470 GLI2P10070 1586 aa15.41■□□□□ 0.06
LINC00297-201ENST00000453470 KDM5BQ9UGL1 1544 aa15.4■□□□□ 0.06
LINC00297-201ENST00000453470 TSPOAP1O95153 1857 aa15.4■□□□□ 0.06
LINC00297-201ENST00000453470 UGGT2Q9NYU1 1516 aa15.38■□□□□ 0.05
LINC00297-201ENST00000453470 EPRSP07814 1512 aaKnown RBP15.38■□□□□ 0.05
LINC00297-201ENST00000453470 TEX14Q8IWB6 1497 aa15.36■□□□□ 0.05
LINC00297-201ENST00000453470 GOLGA3Q08378 1498 aa15.34■□□□□ 0.05
LINC00297-201ENST00000453470 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.05
LINC00297-201ENST00000453470 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
LINC00297-201ENST00000453470 CD109Q6YHK3 1445 aa15.33■□□□□ 0.04
LINC00297-201ENST00000453470 P3H3Q8IVL6 736 aa15.31■□□□□ 0.04
LINC00297-201ENST00000453470 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
LINC00297-201ENST00000453470 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
LINC00297-201ENST00000453470 WDR7Q9Y4E6 1490 aa15.29■□□□□ 0.04
LINC00297-201ENST00000453470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
LINC00297-201ENST00000453470 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.04
LINC00297-201ENST00000453470 KIAA0556O60303 1618 aa15.26■□□□□ 0.03
LINC00297-201ENST00000453470 ARID3CA6NKF2 412 aa15.26■□□□□ 0.03
LINC00297-201ENST00000453470 ADGRL1O94910 1474 aa15.26■□□□□ 0.03
LINC00297-201ENST00000453470 PRXQ9BXM0 1461 aa15.26■□□□□ 0.03
LINC00297-201ENST00000453470 ILDR1Q86SU0 546 aaPredicted RBP15.25■□□□□ 0.03
LINC00297-201ENST00000453470 MAGI3Q5TCQ9 1506 aa15.23■□□□□ 0.03
LINC00297-201ENST00000453470 ZCCHC11Q5TAX3 1644 aaKnown RBP15.23■□□□□ 0.03
LINC00297-201ENST00000453470 PHLDB1Q86UU1 1377 aa15.23■□□□□ 0.03
LINC00297-201ENST00000453470 MAP3K4Q9Y6R4 1608 aa15.22■□□□□ 0.03
LINC00297-201ENST00000453470 PPRC1Q5VV67 1664 aaKnown RBP15.22■□□□□ 0.03
LINC00297-201ENST00000453470 PLEKHD1A6NEE1 506 aa15.19■□□□□ 0.02
LINC00297-201ENST00000453470 ATP10BO94823 1461 aa15.19■□□□□ 0.02
LINC00297-201ENST00000453470 RANGAP1P46060 587 aaPredicted RBP15.18■□□□□ 0.02
LINC00297-201ENST00000453470 ABCA8O94911 1581 aa15.18■□□□□ 0.02
LINC00297-201ENST00000453470 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
LINC00297-201ENST00000453470 RAPGEF3O95398 923 aa15.16■□□□□ 0.02
LINC00297-201ENST00000453470 ARID4BQ4LE39 1312 aaPredicted RBP15.13■□□□□ 0.01
LINC00297-201ENST00000453470 ARAP3Q8WWN8 1544 aa15.12■□□□□ 0.01
LINC00297-201ENST00000453470 CFAP43Q8NDM7 1665 aa15.09■□□□□ 0.01
LINC00297-201ENST00000453470 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
LINC00297-201ENST00000453470 EEA1Q15075 1411 aa15.08■□□□□ 0
LINC00297-201ENST00000453470 NEO1Q92859 1461 aa15.05■□□□□ -0
LINC00297-201ENST00000453470 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
LINC00297-201ENST00000453470 ATP1B4Q9UN42 357 aaPredicted RBP15.03■□□□□ -0
LINC00297-201ENST00000453470 HECW2Q9P2P5 1572 aa15.02■□□□□ -0
LINC00297-201ENST00000453470 CDK11AQ9UQ88 783 aaPredicted RBP15.02■□□□□ -0
LINC00297-201ENST00000453470 FBXO41Q8TF61 875 aa15□□□□□ -0.01
LINC00297-201ENST00000453470 FHOD3Q2V2M9 1422 aa14.99□□□□□ -0.01
LINC00297-201ENST00000453470 DENND4BO75064 1496 aaPredicted RBP14.98□□□□□ -0.01
LINC00297-201ENST00000453470 NUP153P49790 1475 aaKnown RBP14.98□□□□□ -0.01
LINC00297-201ENST00000453470 AKNAQ7Z591 1439 aa14.98□□□□□ -0.01
LINC00297-201ENST00000453470 PTPRMP28827 1452 aa14.97□□□□□ -0.01
LINC00297-201ENST00000453470 ABCA9Q8IUA7 1624 aa14.97□□□□□ -0.01
LINC00297-201ENST00000453470 EFCAB2Q5VUJ9 269 aa14.97□□□□□ -0.01
LINC00297-201ENST00000453470 RAPGEF6Q8TEU7 1601 aa14.96□□□□□ -0.01
LINC00297-201ENST00000453470 SAMD9Q5K651 1589 aa14.96□□□□□ -0.01
LINC00297-201ENST00000453470 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms