RNA–Protein interactions for RNA: ENST00000452293.5

RETREG2-207, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-207ENST00000452293 PRG4Q92954 1404 aaPredicted RBP44.33■■■■■ 4.69
RETREG2-207ENST00000452293 JPH4Q96JJ6 628 aa44.33■■■■■ 4.69
RETREG2-207ENST00000452293 KIAA0586Q9BVV6 1533 aa44.27■■■■■ 4.68
RETREG2-207ENST00000452293 RAPGEF2Q9Y4G8 1499 aa44.18■■■■■ 4.66
RETREG2-207ENST00000452293 IQGAP2Q13576 1575 aa44.06■■■■■ 4.64
RETREG2-207ENST00000452293 TRHP20396 242 aaPredicted RBP44.02■■■■■ 4.64
RETREG2-207ENST00000452293 CTTNBP2Q8WZ74 1663 aa43.94■■■■■ 4.63
RETREG2-207ENST00000452293 PRXQ9BXM0 1461 aa43.93■■■■■ 4.62
RETREG2-207ENST00000452293 TTBK1Q5TCY1 1321 aaPredicted RBP43.87■■■■■ 4.61
RETREG2-207ENST00000452293 CHIC1Q5VXU3 224 aa43.86■■■■■ 4.61
RETREG2-207ENST00000452293 FAM9AQ8IZU1 332 aaPredicted RBP43.81■■■■■ 4.6
RETREG2-207ENST00000452293 CSRNP3Q8WYN3 585 aa43.8■■■■■ 4.6
RETREG2-207ENST00000452293 ADCY10Q96PN6 1610 aa43.79■■■■■ 4.6
RETREG2-207ENST00000452293 CARMIL2Q6F5E8 1435 aa43.78■■■■■ 4.6
RETREG2-207ENST00000452293 DISP1Q96F81 1524 aa43.78■■■■■ 4.6
RETREG2-207ENST00000452293 UGGT2Q9NYU1 1516 aa43.76■■■■■ 4.6
RETREG2-207ENST00000452293 PTPRGP23470 1445 aa43.72■■■■■ 4.59
RETREG2-207ENST00000452293 EEA1Q15075 1411 aa43.7■■■■■ 4.59
RETREG2-207ENST00000452293 TNIKQ9UKE5 1360 aa43.69■■■■■ 4.59
RETREG2-207ENST00000452293 KIAA0556O60303 1618 aa43.68■■■■■ 4.58
RETREG2-207ENST00000452293 KIF13AQ9H1H9 1805 aa43.55■■■■■ 4.56
RETREG2-207ENST00000452293 NPM1P06748 294 aaKnown RBP eCLIP43.52■■■■■ 4.56
RETREG2-207ENST00000452293 KIF21BO75037 1637 aa43.44■■■■■ 4.54
RETREG2-207ENST00000452293 MAPKBP1O60336 1514 aa43.43■■■■■ 4.54
RETREG2-207ENST00000452293 GOLGA3Q08378 1498 aa43.43■■■■■ 4.54
RETREG2-207ENST00000452293 UACAQ9BZF9 1416 aa43.41■■■■■ 4.54
RETREG2-207ENST00000452293 EHMT2Q96KQ7 1210 aa43.4■■■■■ 4.54
RETREG2-207ENST00000452293 ABCC2Q92887 1545 aa43.38■■■■■ 4.53
RETREG2-207ENST00000452293 UHRF1BP1LA0JNW5 1464 aa43.34■■■■■ 4.53
RETREG2-207ENST00000452293 P3H3Q8IVL6 736 aa43.34■■■■■ 4.53
RETREG2-207ENST00000452293 RANGAP1P46060 587 aaPredicted RBP43.32■■■■■ 4.53
RETREG2-207ENST00000452293 DIP2BQ9P265 1576 aa43.3■■■■■ 4.52
RETREG2-207ENST00000452293 ABCC10Q5T3U5 1492 aa43.29■■■■■ 4.52
RETREG2-207ENST00000452293 PLB1Q6P1J6 1458 aa43.29■■■■■ 4.52
RETREG2-207ENST00000452293 SAMD9Q5K651 1589 aa43.26■■■■■ 4.52
RETREG2-207ENST00000452293 FAM69CQ0P6D2 419 aa43.25■■■■■ 4.51
RETREG2-207ENST00000452293 ZCCHC11Q5TAX3 1644 aaKnown RBP43.24■■■■■ 4.51
RETREG2-207ENST00000452293 ABCA8O94911 1581 aa43.2■■■■■ 4.51
RETREG2-207ENST00000452293 KDM5BQ9UGL1 1544 aa43.18■■■■■ 4.5
RETREG2-207ENST00000452293 TSPOAP1O95153 1857 aa43.17■■■■■ 4.5
RETREG2-207ENST00000452293 ASXL2Q76L83 1435 aa43.17■■■■■ 4.5
RETREG2-207ENST00000452293 UBTFP17480 764 aaKnown RBP43.08■■■■■ 4.49
RETREG2-207ENST00000452293 FHOD3Q2V2M9 1422 aa43.05■■■■■ 4.48
RETREG2-207ENST00000452293 ARID3CA6NKF2 412 aa43.01■■■■■ 4.48
RETREG2-207ENST00000452293 RAPGEF6Q8TEU7 1601 aa42.95■■■■■ 4.47
RETREG2-207ENST00000452293 EFCAB5A4FU69 1503 aa42.92■■■■■ 4.46
RETREG2-207ENST00000452293 EPRSP07814 1512 aaKnown RBP42.91■■■■■ 4.46
RETREG2-207ENST00000452293 GLI2P10070 1586 aa42.9■■■■■ 4.46
RETREG2-207ENST00000452293 PPRC1Q5VV67 1664 aaKnown RBP42.87■■■■■ 4.45
RETREG2-207ENST00000452293 WDR7Q9Y4E6 1490 aa42.87■■■■■ 4.45
RETREG2-207ENST00000452293 ATP10BO94823 1461 aa42.82■■■■■ 4.45
RETREG2-207ENST00000452293 MAP3K4Q9Y6R4 1608 aa42.79■■■■■ 4.44
RETREG2-207ENST00000452293 KCNH8Q96L42 1107 aa42.75■■■■■ 4.43
RETREG2-207ENST00000452293 NUP153P49790 1475 aaKnown RBP42.74■■■■■ 4.43
RETREG2-207ENST00000452293 ARHGAP35Q9NRY4 1499 aa42.74■■■■■ 4.43
RETREG2-207ENST00000452293 KDM6BO15054 1643 aa42.71■■■■■ 4.43
RETREG2-207ENST00000452293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.66■■■■■ 4.42
RETREG2-207ENST00000452293 HNRNPUL2Q1KMD3 747 aaKnown RBP42.66■■■■■ 4.42
RETREG2-207ENST00000452293 CFAP43Q8NDM7 1665 aa42.61■■■■■ 4.41
RETREG2-207ENST00000452293 CDK13Q14004 1512 aaKnown RBP42.51■■■■■ 4.4
RETREG2-207ENST00000452293 CD109Q6YHK3 1445 aa42.51■■■■■ 4.4
RETREG2-207ENST00000452293 FMN1Q68DA7 1419 aa42.49■■■■■ 4.39
RETREG2-207ENST00000452293 ATP1B4Q9UN42 357 aaPredicted RBP42.49■■■■■ 4.39
RETREG2-207ENST00000452293 TEX14Q8IWB6 1497 aa42.49■■■■■ 4.39
RETREG2-207ENST00000452293 HECW1Q76N89 1606 aa42.45■■■■■ 4.39
RETREG2-207ENST00000452293 ABCA9Q8IUA7 1624 aa42.43■■■■■ 4.38
RETREG2-207ENST00000452293 LRRIQ1Q96JM4 1722 aa42.42■■■■■ 4.38
RETREG2-207ENST00000452293 COL17A1Q9UMD9 1497 aaPredicted RBP42.42■■■■■ 4.38
RETREG2-207ENST00000452293 MAGI3Q5TCQ9 1506 aa42.4■■■■■ 4.38
RETREG2-207ENST00000452293 CLIP1P30622 1438 aa42.35■■■■■ 4.37
RETREG2-207ENST00000452293 PLEKHD1A6NEE1 506 aa42.34■■■■■ 4.37
RETREG2-207ENST00000452293 PCF11O94913 1555 aaKnown RBP42.33■■■■■ 4.37
RETREG2-207ENST00000452293 TTC37Q6PGP7 1564 aa42.22■■■■■ 4.35
RETREG2-207ENST00000452293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.21■■■■■ 4.355e-6■■■■■ 27.2
RETREG2-207ENST00000452293 LOC105371045A0A1W2PR82 267 aa42.18■■■■■ 4.34
RETREG2-207ENST00000452293 CASKIN1Q8WXD9 1431 aa42.17■■■■■ 4.34
RETREG2-207ENST00000452293 KIF14Q15058 1648 aa42.11■■■■■ 4.33
RETREG2-207ENST00000452293 CEP162Q5TB80 1403 aa42.11■■■■■ 4.33
RETREG2-207ENST00000452293 FYCO1Q9BQS8 1478 aa42.06■■■■■ 4.32
RETREG2-207ENST00000452293 ARAP3Q8WWN8 1544 aa42.04■■■■■ 4.32
RETREG2-207ENST00000452293 CDK11AQ9UQ88 783 aaPredicted RBP42.02■■■■■ 4.32
RETREG2-207ENST00000452293 CCDC18Q5T9S5 1454 aa42.02■■■■■ 4.32
RETREG2-207ENST00000452293 NEO1Q92859 1461 aa42.02■■■■■ 4.32
RETREG2-207ENST00000452293 TROQ12816 1431 aaPredicted RBP42.01■■■■■ 4.32
RETREG2-207ENST00000452293 AEBP2Q6ZN18 517 aaPredicted RBP41.99■■■■■ 4.31
RETREG2-207ENST00000452293 MYO5CQ9NQX4 1742 aa41.98■■■■■ 4.31
RETREG2-207ENST00000452293 FANCAO15360 1455 aa41.95■■■■■ 4.31
RETREG2-207ENST00000452293 CFAP74Q9C0B2 1584 aa41.93■■■■■ 4.3
RETREG2-207ENST00000452293 RAPGEF3O95398 923 aa41.93■■■■■ 4.3
RETREG2-207ENST00000452293 FRMPD1Q5SYB0 1578 aa41.92■■■■■ 4.3
RETREG2-207ENST00000452293 PHLDB1Q86UU1 1377 aa41.91■■■■■ 4.3
RETREG2-207ENST00000452293 AKNAQ7Z591 1439 aa41.89■■■■■ 4.3
RETREG2-207ENST00000452293 PLCH2O75038 1416 aa41.86■■■■■ 4.29
RETREG2-207ENST00000452293 KDM4FA0A1W2PPD8 638 aa41.85■■■■■ 4.29
RETREG2-207ENST00000452293 RICTORQ6R327 1708 aa41.84■■■■■ 4.29
RETREG2-207ENST00000452293 CDC42BPBQ9Y5S2 1711 aa41.79■■■■■ 4.28
RETREG2-207ENST00000452293 DENND4BO75064 1496 aaPredicted RBP41.78■■■■■ 4.28
RETREG2-207ENST00000452293 ADGRL1O94910 1474 aa41.77■■■■■ 4.28
RETREG2-207ENST00000452293 ARHGAP5Q13017 1502 aa41.75■■■■■ 4.27
RETREG2-207ENST00000452293 CDC42BPAQ5VT25 1732 aa41.72■■■■■ 4.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms