RNA–Protein interactions for RNA: ENST00000451980.3

LINC01548-201, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 5 BASIC

Gene LINC01548, Length 696 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-201ENST00000451980 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
LINC01548-201ENST00000451980 ZNF579Q8NAF0 562 aaKnown RBP14.84□□□□□ -0.03
LINC01548-201ENST00000451980 DCBLD2Q96PD2 775 aa14.82□□□□□ -0.04
LINC01548-201ENST00000451980 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
LINC01548-201ENST00000451980 ATAD2BQ9ULI0 1458 aa14.81□□□□□ -0.04
LINC01548-201ENST00000451980 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
LINC01548-201ENST00000451980 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.05
LINC01548-201ENST00000451980 CREBZFQ9NS37 354 aa14.77□□□□□ -0.05
LINC01548-201ENST00000451980 ZRANB1Q9UGI0 708 aa14.77□□□□□ -0.05
LINC01548-201ENST00000451980 CC2D2AQ9P2K1 1620 aa14.76□□□□□ -0.05
LINC01548-201ENST00000451980 SMARCA2P51531 1590 aa14.75□□□□□ -0.05
LINC01548-201ENST00000451980 TOP2AP11388 1531 aaKnown RBP14.75□□□□□ -0.05
LINC01548-201ENST00000451980 NCAPD3P42695 1498 aa14.71□□□□□ -0.05
LINC01548-201ENST00000451980 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
LINC01548-201ENST00000451980 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
LINC01548-201ENST00000451980 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
LINC01548-201ENST00000451980 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
LINC01548-201ENST00000451980 SPDYE4A6NLX3 237 aa14.6□□□□□ -0.07
LINC01548-201ENST00000451980 CCDC88BA6NC98 1476 aa14.59□□□□□ -0.07
LINC01548-201ENST00000451980 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC01548-201ENST00000451980 OTUD5Q96G74 571 aa14.5□□□□□ -0.09
LINC01548-201ENST00000451980 PHF12Q96QT6 1004 aa14.5□□□□□ -0.09
LINC01548-201ENST00000451980 PLSCR2Q9NRY7 297 aa14.47□□□□□ -0.09
LINC01548-201ENST00000451980 MNX1P50219 401 aaPredicted RBP14.46□□□□□ -0.09
LINC01548-201ENST00000451980 POTEB2H3BUK9 544 aa14.44□□□□□ -0.1
LINC01548-201ENST00000451980 PELP1Q8IZL8 1130 aaKnown RBP14.37□□□□□ -0.11
LINC01548-201ENST00000451980 ASTLQ6HA08 431 aaPredicted RBP14.34□□□□□ -0.11
LINC01548-201ENST00000451980 CFTRP13569 1480 aa14.33□□□□□ -0.12
LINC01548-201ENST00000451980 MS4A3Q96HJ5 214 aa14.31□□□□□ -0.12
LINC01548-201ENST00000451980 C7P10643 843 aa14.3□□□□□ -0.12
LINC01548-201ENST00000451980 SLC39A7Q92504 469 aa14.3□□□□□ -0.12
LINC01548-201ENST00000451980 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
LINC01548-201ENST00000451980 ATMINO43313 823 aaPredicted RBP14.29□□□□□ -0.12
LINC01548-201ENST00000451980 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
LINC01548-201ENST00000451980 POTEMA6NI47 508 aa14.28□□□□□ -0.12
LINC01548-201ENST00000451980 NESP48681 1621 aa14.28□□□□□ -0.12
LINC01548-201ENST00000451980 CADPSQ9ULU8 1353 aa14.28□□□□□ -0.12
LINC01548-201ENST00000451980 ABCC8Q09428 1581 aa14.23□□□□□ -0.13
LINC01548-201ENST00000451980 POTEGQ6S5H5 508 aa14.23□□□□□ -0.13
LINC01548-201ENST00000451980 MAMSTRQ6ZN01 415 aa14.23□□□□□ -0.13
LINC01548-201ENST00000451980 PROM2Q8N271 834 aa14.22□□□□□ -0.13
LINC01548-201ENST00000451980 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
LINC01548-201ENST00000451980 TSPYL2Q9H2G4 693 aaPredicted RBP14.18□□□□□ -0.14
LINC01548-201ENST00000451980 PCDH10Q9P2E7 1040 aa14.18□□□□□ -0.14
LINC01548-201ENST00000451980 CCDC61Q9Y6R9 512 aa14.18□□□□□ -0.14
LINC01548-201ENST00000451980 POTEJP0CG39 1038 aa14.17□□□□□ -0.14
LINC01548-201ENST00000451980 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
LINC01548-201ENST00000451980 KIF12Q96FN5 646 aa14.13□□□□□ -0.15
LINC01548-201ENST00000451980 KIF21AQ7Z4S6 1674 aa14.13□□□□□ -0.15
LINC01548-201ENST00000451980 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
LINC01548-201ENST00000451980 ATN1P54259 1190 aaPredicted RBP14.12□□□□□ -0.15
LINC01548-201ENST00000451980 WRNQ14191 1432 aaPredicted RBP eCLIP14.1□□□□□ -0.15
LINC01548-201ENST00000451980 CUX1P39880 1505 aa14.1□□□□□ -0.15
LINC01548-201ENST00000451980 SCUBE2Q9NQ36 999 aa14.09□□□□□ -0.15
LINC01548-201ENST00000451980 BIVM-ERCC5R4GMW8 1640 aa14.08□□□□□ -0.15
LINC01548-201ENST00000451980 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
LINC01548-201ENST00000451980 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
LINC01548-201ENST00000451980 PDS5BQ9NTI5 1447 aa14.05□□□□□ -0.16
LINC01548-201ENST00000451980 BMP2KQ9NSY1 1161 aaPredicted RBP14.04□□□□□ -0.16
LINC01548-201ENST00000451980 TIE1P35590 1138 aa14.03□□□□□ -0.16
LINC01548-201ENST00000451980 TRIM41Q8WV44 630 aa14.03□□□□□ -0.16
LINC01548-201ENST00000451980 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
LINC01548-201ENST00000451980 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
LINC01548-201ENST00000451980 POTEFA5A3E0 1075 aa13.99□□□□□ -0.17
LINC01548-201ENST00000451980 MAP3K13O43283 966 aa13.99□□□□□ -0.17
LINC01548-201ENST00000451980 LCE2DQ5TA82 110 aaPredicted RBP13.99□□□□□ -0.17
LINC01548-201ENST00000451980 DNMBPQ6XZF7 1577 aa13.99□□□□□ -0.17
LINC01548-201ENST00000451980 TOPBP1Q92547 1522 aa13.99□□□□□ -0.17
LINC01548-201ENST00000451980 MIER1Q8N108 512 aa13.97□□□□□ -0.17
LINC01548-201ENST00000451980 FAM163AQ96GL9 167 aaPredicted RBP13.97□□□□□ -0.17
LINC01548-201ENST00000451980 TRPC6Q9Y210 931 aa13.97□□□□□ -0.17
LINC01548-201ENST00000451980 RASEFQ8IZ41 740 aa13.95□□□□□ -0.18
LINC01548-201ENST00000451980 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
LINC01548-201ENST00000451980 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
LINC01548-201ENST00000451980 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
LINC01548-201ENST00000451980 RUSC2Q8N2Y8 1516 aa13.92□□□□□ -0.18
LINC01548-201ENST00000451980 SOGA1O94964 1423 aa13.91□□□□□ -0.18
LINC01548-201ENST00000451980 WDR62O43379 1518 aa13.91□□□□□ -0.18
LINC01548-201ENST00000451980 SGIP1Q9BQI5 828 aa13.91□□□□□ -0.18
LINC01548-201ENST00000451980 TTLL13PA6NNM8 815 aa13.9□□□□□ -0.18
LINC01548-201ENST00000451980 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
LINC01548-201ENST00000451980 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
LINC01548-201ENST00000451980 SEC24BO95487 1268 aa13.88□□□□□ -0.19
LINC01548-201ENST00000451980 IER5LQ5T953 404 aa13.87□□□□□ -0.19
LINC01548-201ENST00000451980 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
LINC01548-201ENST00000451980 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
LINC01548-201ENST00000451980 COLQQ9Y215 455 aaPredicted RBP13.86□□□□□ -0.19
LINC01548-201ENST00000451980 CUX2O14529 1486 aa13.85□□□□□ -0.19
LINC01548-201ENST00000451980 TARBP1Q13395 1621 aaKnown RBP13.84□□□□□ -0.19
LINC01548-201ENST00000451980 ZBTB47Q9UFB7 747 aaPredicted RBP13.82□□□□□ -0.2
LINC01548-201ENST00000451980 ABCA10Q8WWZ4 1543 aa13.81□□□□□ -0.2
LINC01548-201ENST00000451980 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
LINC01548-201ENST00000451980 TRIM35Q9UPQ4 493 aa13.81□□□□□ -0.2
LINC01548-201ENST00000451980 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
LINC01548-201ENST00000451980 FAM9AQ8IZU1 332 aaPredicted RBP13.79□□□□□ -0.2
LINC01548-201ENST00000451980 EEA1Q15075 1411 aa13.76□□□□□ -0.21
LINC01548-201ENST00000451980 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
LINC01548-201ENST00000451980 NUBP1P53384 320 aa13.75□□□□□ -0.21
LINC01548-201ENST00000451980 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
LINC01548-201ENST00000451980 KIF27Q86VH2 1401 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms