RNA–Protein interactions for RNA: ENST00000451953.1

LINC01007-203, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 4 BASIC

Gene LINC01007, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-203ENST00000451953 TNIKQ9UKE5 1360 aa13.46□□□□□ -0.25
LINC01007-203ENST00000451953 NUP160Q12769 1436 aa13.44□□□□□ -0.26
LINC01007-203ENST00000451953 KIAA0586Q9BVV6 1533 aa13.42□□□□□ -0.26
LINC01007-203ENST00000451953 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
LINC01007-203ENST00000451953 CEP170Q5SW79 1584 aa13.39□□□□□ -0.27
LINC01007-203ENST00000451953 CHD1O14646 1710 aa13.37□□□□□ -0.27
LINC01007-203ENST00000451953 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
LINC01007-203ENST00000451953 CLIP1P30622 1438 aa13.34□□□□□ -0.27
LINC01007-203ENST00000451953 CEP162Q5TB80 1403 aa13.34□□□□□ -0.27
LINC01007-203ENST00000451953 IQGAP2Q13576 1575 aa13.33□□□□□ -0.28
LINC01007-203ENST00000451953 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
LINC01007-203ENST00000451953 CLASP1Q7Z460 1538 aa13.3□□□□□ -0.28
LINC01007-203ENST00000451953 CARMIL2Q6F5E8 1435 aa13.3□□□□□ -0.28
LINC01007-203ENST00000451953 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
LINC01007-203ENST00000451953 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
LINC01007-203ENST00000451953 CTTNBP2Q8WZ74 1663 aa13.26□□□□□ -0.29
LINC01007-203ENST00000451953 ARHGAP35Q9NRY4 1499 aa13.26□□□□□ -0.29
LINC01007-203ENST00000451953 DISP1Q96F81 1524 aa13.24□□□□□ -0.29
LINC01007-203ENST00000451953 FHOD3Q2V2M9 1422 aa13.24□□□□□ -0.29
LINC01007-203ENST00000451953 EFCAB5A4FU69 1503 aa13.23□□□□□ -0.29
LINC01007-203ENST00000451953 PTPRGP23470 1445 aa13.22□□□□□ -0.29
LINC01007-203ENST00000451953 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
LINC01007-203ENST00000451953 SHROOM2Q13796 1616 aa13.21□□□□□ -0.3
LINC01007-203ENST00000451953 ATP1B4Q9UN42 357 aaPredicted RBP13.2□□□□□ -0.3
LINC01007-203ENST00000451953 SAMD9Q5K651 1589 aa13.19□□□□□ -0.3
LINC01007-203ENST00000451953 KIAA0556O60303 1618 aa13.18□□□□□ -0.3
LINC01007-203ENST00000451953 FMN1Q68DA7 1419 aa13.18□□□□□ -0.3
LINC01007-203ENST00000451953 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
LINC01007-203ENST00000451953 DNAJC5Q9H3Z4 198 aa13.16□□□□□ -0.3
LINC01007-203ENST00000451953 ARHGEF11O15085 1522 aa13.16□□□□□ -0.3
LINC01007-203ENST00000451953 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
LINC01007-203ENST00000451953 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.3
LINC01007-203ENST00000451953 ARID3CA6NKF2 412 aa13.12□□□□□ -0.31
LINC01007-203ENST00000451953 APLP2Q06481 763 aa13.12□□□□□ -0.31
LINC01007-203ENST00000451953 UACAQ9BZF9 1416 aa13.11□□□□□ -0.31
LINC01007-203ENST00000451953 PLB1Q6P1J6 1458 aa13.1□□□□□ -0.31
LINC01007-203ENST00000451953 CASKIN1Q8WXD9 1431 aa13.1□□□□□ -0.31
LINC01007-203ENST00000451953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
LINC01007-203ENST00000451953 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
LINC01007-203ENST00000451953 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC01007-203ENST00000451953 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
LINC01007-203ENST00000451953 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
LINC01007-203ENST00000451953 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
LINC01007-203ENST00000451953 FYCO1Q9BQS8 1478 aa13.05□□□□□ -0.32
LINC01007-203ENST00000451953 ABCA8O94911 1581 aa13.04□□□□□ -0.32
LINC01007-203ENST00000451953 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
LINC01007-203ENST00000451953 UHRF1BP1LA0JNW5 1464 aa13.03□□□□□ -0.32
LINC01007-203ENST00000451953 NUP153P49790 1475 aaKnown RBP13.03□□□□□ -0.32
LINC01007-203ENST00000451953 PCF11O94913 1555 aaKnown RBP13.03□□□□□ -0.32
LINC01007-203ENST00000451953 ABCC2Q92887 1545 aa13.02□□□□□ -0.33
LINC01007-203ENST00000451953 PPARGC1BQ86YN6 1023 aaKnown RBP13.01□□□□□ -0.33
LINC01007-203ENST00000451953 RAPGEF6Q8TEU7 1601 aa13.01□□□□□ -0.33
LINC01007-203ENST00000451953 EPRSP07814 1512 aaKnown RBP13□□□□□ -0.33
LINC01007-203ENST00000451953 ATP10BO94823 1461 aa13□□□□□ -0.33
LINC01007-203ENST00000451953 PLEKHD1A6NEE1 506 aa13□□□□□ -0.33
LINC01007-203ENST00000451953 HECW1Q76N89 1606 aa12.99□□□□□ -0.33
LINC01007-203ENST00000451953 CCDC18Q5T9S5 1454 aa12.98□□□□□ -0.33
LINC01007-203ENST00000451953 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
LINC01007-203ENST00000451953 CDK13Q14004 1512 aaKnown RBP12.97□□□□□ -0.33
LINC01007-203ENST00000451953 MTUS2Q5JR59 1369 aa12.96□□□□□ -0.33
LINC01007-203ENST00000451953 KDM5BQ9UGL1 1544 aa12.96□□□□□ -0.33
LINC01007-203ENST00000451953 ADCY10Q96PN6 1610 aa12.95□□□□□ -0.34
LINC01007-203ENST00000451953 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
LINC01007-203ENST00000451953 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
LINC01007-203ENST00000451953 TIAM1Q13009 1591 aa12.92□□□□□ -0.34
LINC01007-203ENST00000451953 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
LINC01007-203ENST00000451953 TROQ12816 1431 aaPredicted RBP12.9□□□□□ -0.34
LINC01007-203ENST00000451953 ASXL2Q76L83 1435 aa12.9□□□□□ -0.34
LINC01007-203ENST00000451953 WDR7Q9Y4E6 1490 aa12.87□□□□□ -0.35
LINC01007-203ENST00000451953 ZCCHC11Q5TAX3 1644 aaKnown RBP12.87□□□□□ -0.35
LINC01007-203ENST00000451953 MAGI3Q5TCQ9 1506 aa12.86□□□□□ -0.35
LINC01007-203ENST00000451953 EHBP1L1Q8N3D4 1523 aa12.84□□□□□ -0.35
LINC01007-203ENST00000451953 CFAP43Q8NDM7 1665 aa12.83□□□□□ -0.35
LINC01007-203ENST00000451953 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
LINC01007-203ENST00000451953 FAM69CQ0P6D2 419 aa12.83□□□□□ -0.36
LINC01007-203ENST00000451953 MAPKBP1O60336 1514 aa12.83□□□□□ -0.36
LINC01007-203ENST00000451953 LRRIQ1Q96JM4 1722 aa12.82□□□□□ -0.36
LINC01007-203ENST00000451953 NCOA2Q15596 1464 aa12.82□□□□□ -0.36
LINC01007-203ENST00000451953 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
LINC01007-203ENST00000451953 CFDP1Q9UEE9 299 aaPredicted RBP12.8□□□□□ -0.36
LINC01007-203ENST00000451953 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
LINC01007-203ENST00000451953 KIF14Q15058 1648 aa12.77□□□□□ -0.36
LINC01007-203ENST00000451953 ZNF777Q9ULD5 760 aaPredicted RBP12.77□□□□□ -0.37
LINC01007-203ENST00000451953 ABCC10Q5T3U5 1492 aa12.77□□□□□ -0.37
LINC01007-203ENST00000451953 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
LINC01007-203ENST00000451953 EFCAB2Q5VUJ9 269 aa12.76□□□□□ -0.37
LINC01007-203ENST00000451953 MYOM3Q5VTT5 1437 aa12.76□□□□□ -0.37
LINC01007-203ENST00000451953 CD109Q6YHK3 1445 aa12.76□□□□□ -0.37
LINC01007-203ENST00000451953 GPATCH8Q9UKJ3 1502 aaKnown RBP12.76□□□□□ -0.37
LINC01007-203ENST00000451953 SUPT6HQ7KZ85 1726 aaKnown RBP12.75□□□□□ -0.37
LINC01007-203ENST00000451953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC01007-203ENST00000451953 PLCH2O75038 1416 aa12.74□□□□□ -0.37
LINC01007-203ENST00000451953 FGD6Q6ZV73 1430 aa12.72□□□□□ -0.37
LINC01007-203ENST00000451953 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
LINC01007-203ENST00000451953 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
LINC01007-203ENST00000451953 TRIM26Q12899 539 aaPredicted RBP12.72□□□□□ -0.37
LINC01007-203ENST00000451953 GLI2P10070 1586 aa12.7□□□□□ -0.38
LINC01007-203ENST00000451953 TTC37Q6PGP7 1564 aa12.7□□□□□ -0.38
LINC01007-203ENST00000451953 ARHGAP5Q13017 1502 aa12.69□□□□□ -0.38
LINC01007-203ENST00000451953 ITGAEP38570 1179 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms