RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 DIP2BQ9P265 1576 aa14.13□□□□□ -0.15
CNOT4-207ENST00000451834 IQGAP2Q13576 1575 aa14.12□□□□□ -0.15
CNOT4-207ENST00000451834 SAMD9Q5K651 1589 aa14.12□□□□□ -0.15
CNOT4-207ENST00000451834 MAP3K4Q9Y6R4 1608 aa14.12□□□□□ -0.15
CNOT4-207ENST00000451834 TDRD9Q8NDG6 1382 aaKnown RBP14.09□□□□□ -0.15
CNOT4-207ENST00000451834 KIAA0556O60303 1618 aa14.08□□□□□ -0.15
CNOT4-207ENST00000451834 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
CNOT4-207ENST00000451834 KDM5BQ9UGL1 1544 aa14.07□□□□□ -0.16
CNOT4-207ENST00000451834 KIF21BO75037 1637 aa14.04□□□□□ -0.16
CNOT4-207ENST00000451834 IGF1RP08069 1367 aa14.04□□□□□ -0.16
CNOT4-207ENST00000451834 ABCA8O94911 1581 aa14.03□□□□□ -0.16
CNOT4-207ENST00000451834 CFAP43Q8NDM7 1665 aa14.03□□□□□ -0.16
CNOT4-207ENST00000451834 PRXQ9BXM0 1461 aa14.03□□□□□ -0.16
CNOT4-207ENST00000451834 DISP1Q96F81 1524 aa14.02□□□□□ -0.17
CNOT4-207ENST00000451834 ABCC2Q92887 1545 aa13.99□□□□□ -0.17
CNOT4-207ENST00000451834 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
CNOT4-207ENST00000451834 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
CNOT4-207ENST00000451834 EEA1Q15075 1411 aa13.96□□□□□ -0.17
CNOT4-207ENST00000451834 RAPGEF2Q9Y4G8 1499 aa13.94□□□□□ -0.18
CNOT4-207ENST00000451834 EFCAB5A4FU69 1503 aa13.9□□□□□ -0.18
CNOT4-207ENST00000451834 ABCA9Q8IUA7 1624 aa13.88□□□□□ -0.19
CNOT4-207ENST00000451834 GOLGA3Q08378 1498 aa13.88□□□□□ -0.19
CNOT4-207ENST00000451834 PRG4Q92954 1404 aaPredicted RBP13.88□□□□□ -0.19
CNOT4-207ENST00000451834 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.2
CNOT4-207ENST00000451834 PLB1Q6P1J6 1458 aa13.83□□□□□ -0.2
CNOT4-207ENST00000451834 ARAP3Q8WWN8 1544 aa13.83□□□□□ -0.2
CNOT4-207ENST00000451834 CHMP7Q8WUX9 453 aaPredicted RBP13.82□□□□□ -0.2
CNOT4-207ENST00000451834 MAGI3Q5TCQ9 1506 aa13.82□□□□□ -0.2
CNOT4-207ENST00000451834 TNIKQ9UKE5 1360 aa13.82□□□□□ -0.2
CNOT4-207ENST00000451834 CARMIL1Q5VZK9 1371 aa13.81□□□□□ -0.2
CNOT4-207ENST00000451834 RAPGEF6Q8TEU7 1601 aa13.78□□□□□ -0.2
CNOT4-207ENST00000451834 CARMIL2Q6F5E8 1435 aa13.78□□□□□ -0.2
CNOT4-207ENST00000451834 EPRSP07814 1512 aaKnown RBP13.75□□□□□ -0.21
CNOT4-207ENST00000451834 UACAQ9BZF9 1416 aa13.74□□□□□ -0.21
CNOT4-207ENST00000451834 ZMYM4Q5VZL5 1548 aa13.73□□□□□ -0.21
CNOT4-207ENST00000451834 LRRIQ1Q96JM4 1722 aa13.73□□□□□ -0.21
CNOT4-207ENST00000451834 KDM6BO15054 1643 aa13.72□□□□□ -0.21
CNOT4-207ENST00000451834 REREQ9P2R6 1566 aa13.71□□□□□ -0.22
CNOT4-207ENST00000451834 RICTORQ6R327 1708 aa13.7□□□□□ -0.22
CNOT4-207ENST00000451834 FRMPD1Q5SYB0 1578 aa13.69□□□□□ -0.22
CNOT4-207ENST00000451834 TEX14Q8IWB6 1497 aa13.69□□□□□ -0.22
CNOT4-207ENST00000451834 PHLDB1Q86UU1 1377 aa13.68□□□□□ -0.22
CNOT4-207ENST00000451834 JPH4Q96JJ6 628 aa13.68□□□□□ -0.22
CNOT4-207ENST00000451834 WDR7Q9Y4E6 1490 aa13.68□□□□□ -0.22
CNOT4-207ENST00000451834 BCORL1Q5H9F3 1711 aa13.63□□□□□ -0.23
CNOT4-207ENST00000451834 ADAMTSL3P82987 1691 aa13.63□□□□□ -0.23
CNOT4-207ENST00000451834 ASXL2Q76L83 1435 aa13.61□□□□□ -0.23
CNOT4-207ENST00000451834 NEO1Q92859 1461 aa13.61□□□□□ -0.23
CNOT4-207ENST00000451834 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
CNOT4-207ENST00000451834 PTPRGP23470 1445 aa13.61□□□□□ -0.23
CNOT4-207ENST00000451834 MYO5CQ9NQX4 1742 aa13.58□□□□□ -0.24
CNOT4-207ENST00000451834 ARHGEF40Q8TER5 1519 aa13.56□□□□□ -0.24
CNOT4-207ENST00000451834 KDM5CP41229 1560 aa13.55□□□□□ -0.24
CNOT4-207ENST00000451834 NUP153P49790 1475 aaKnown RBP13.54□□□□□ -0.24
CNOT4-207ENST00000451834 CYB5RLQ6IPT4 315 aa13.54□□□□□ -0.24
CNOT4-207ENST00000451834 PREX2Q70Z35 1606 aa13.54□□□□□ -0.24
CNOT4-207ENST00000451834 TSPOAP1O95153 1857 aa13.53□□□□□ -0.24
CNOT4-207ENST00000451834 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
CNOT4-207ENST00000451834 ITSN2Q9NZM3 1697 aa13.52□□□□□ -0.24
CNOT4-207ENST00000451834 ATP10BO94823 1461 aa13.51□□□□□ -0.25
CNOT4-207ENST00000451834 FAM135AQ9P2D6 1515 aa13.51□□□□□ -0.25
CNOT4-207ENST00000451834 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
CNOT4-207ENST00000451834 MROH2AA6NES4 1674 aa13.5□□□□□ -0.25
CNOT4-207ENST00000451834 MAGI2Q86UL8 1455 aa13.49□□□□□ -0.25
CNOT4-207ENST00000451834 CDC42BPBQ9Y5S2 1711 aa13.48□□□□□ -0.25
CNOT4-207ENST00000451834 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.47□□□□□ -0.25
CNOT4-207ENST00000451834 TTC37Q6PGP7 1564 aa13.46□□□□□ -0.25
CNOT4-207ENST00000451834 CDC42BPAQ5VT25 1732 aa13.45□□□□□ -0.26
CNOT4-207ENST00000451834 FHOD3Q2V2M9 1422 aa13.45□□□□□ -0.26
CNOT4-207ENST00000451834 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
CNOT4-207ENST00000451834 FBLN2P98095 1184 aa13.44□□□□□ -0.26
CNOT4-207ENST00000451834 SIGLEC1Q9BZZ2 1709 aa13.44□□□□□ -0.26
CNOT4-207ENST00000451834 MAP3K1Q13233 1512 aa13.42□□□□□ -0.26
CNOT4-207ENST00000451834 KIF14Q15058 1648 aa13.42□□□□□ -0.26
CNOT4-207ENST00000451834 FYCO1Q9BQS8 1478 aa13.42□□□□□ -0.26
CNOT4-207ENST00000451834 ARHGAP35Q9NRY4 1499 aa13.4□□□□□ -0.26
CNOT4-207ENST00000451834 AGLP35573 1532 aa13.4□□□□□ -0.26
CNOT4-207ENST00000451834 COL17A1Q9UMD9 1497 aaPredicted RBP13.4□□□□□ -0.26
CNOT4-207ENST00000451834 PLXNC1O60486 1568 aa13.38□□□□□ -0.27
CNOT4-207ENST00000451834 FMN1Q68DA7 1419 aa13.38□□□□□ -0.27
CNOT4-207ENST00000451834 INO80Q9ULG1 1556 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-207ENST00000451834 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
CNOT4-207ENST00000451834 PCF11O94913 1555 aaKnown RBP13.36□□□□□ -0.27
CNOT4-207ENST00000451834 ARHGEF12Q9NZN5 1544 aa13.36□□□□□ -0.27
CNOT4-207ENST00000451834 CASKIN1Q8WXD9 1431 aa13.36□□□□□ -0.27
CNOT4-207ENST00000451834 ABCC1P33527 1531 aa13.35□□□□□ -0.27
CNOT4-207ENST00000451834 ADGBQ8N7X0 1667 aa13.34□□□□□ -0.27
CNOT4-207ENST00000451834 MAST1Q9Y2H9 1570 aa13.34□□□□□ -0.27
CNOT4-207ENST00000451834 HECW2Q9P2P5 1572 aa13.33□□□□□ -0.28
CNOT4-207ENST00000451834 FER1L4A9Z1Z3 1794 aa13.32□□□□□ -0.28
CNOT4-207ENST00000451834 PREX1Q8TCU6 1659 aa13.31□□□□□ -0.28
CNOT4-207ENST00000451834 CD109Q6YHK3 1445 aa13.3□□□□□ -0.28
CNOT4-207ENST00000451834 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
CNOT4-207ENST00000451834 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
CNOT4-207ENST00000451834 DIP2CQ9Y2E4 1556 aa13.29□□□□□ -0.28
CNOT4-207ENST00000451834 KIDINS220Q9ULH0 1771 aa13.29□□□□□ -0.28
CNOT4-207ENST00000451834 PLCH2O75038 1416 aa13.29□□□□□ -0.28
CNOT4-207ENST00000451834 CROCC2H7BZ55 1655 aa13.29□□□□□ -0.28
CNOT4-207ENST00000451834 EIF2AK4Q9P2K8 1649 aaKnown RBP13.28□□□□□ -0.28
CNOT4-207ENST00000451834 MLH3Q9UHC1 1453 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms