RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 SENP3Q9H4L4 574 aaPredicted RBP12.44□□□□□ -0.42
HCG18-238ENST00000449544 PPP1R15AO75807 674 aaPredicted RBP12.44□□□□□ -0.42
HCG18-238ENST00000449544 PCGF6Q9BYE7 350 aa12.44□□□□□ -0.42
HCG18-238ENST00000449544 CFDP1Q9UEE9 299 aaPredicted RBP12.44□□□□□ -0.42
HCG18-238ENST00000449544 FGD5Q6ZNL6 1462 aa12.41□□□□□ -0.42
HCG18-238ENST00000449544 GRIN2BQ13224 1484 aa12.4□□□□□ -0.42
HCG18-238ENST00000449544 UNC13AQ9UPW8 1703 aa12.39□□□□□ -0.43
HCG18-238ENST00000449544 EFCAB2Q5VUJ9 269 aa12.39□□□□□ -0.43
HCG18-238ENST00000449544 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
HCG18-238ENST00000449544 CHIC2Q9UKJ5 165 aa12.37□□□□□ -0.43
HCG18-238ENST00000449544 GGT6Q6P531 493 aa12.36□□□□□ -0.43
HCG18-238ENST00000449544 TOPBP1Q92547 1522 aa12.33□□□□□ -0.44
HCG18-238ENST00000449544 ZNF326Q5BKZ1 582 aaKnown RBP12.32□□□□□ -0.44
HCG18-238ENST00000449544 EEA1Q15075 1411 aa12.32□□□□□ -0.44
HCG18-238ENST00000449544 PRG4Q92954 1404 aaPredicted RBP12.31□□□□□ -0.44
HCG18-238ENST00000449544 SNAPC4Q5SXM2 1469 aa12.29□□□□□ -0.44
HCG18-238ENST00000449544 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
HCG18-238ENST00000449544 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.44
HCG18-238ENST00000449544 CLIP1P30622 1438 aa12.27□□□□□ -0.45
HCG18-238ENST00000449544 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.45
HCG18-238ENST00000449544 PLEKHG5O94827 1062 aa12.26□□□□□ -0.45
HCG18-238ENST00000449544 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
HCG18-238ENST00000449544 CCNB3Q8WWL7 1395 aa12.24□□□□□ -0.45
HCG18-238ENST00000449544 TNIKQ9UKE5 1360 aa12.22□□□□□ -0.45
HCG18-238ENST00000449544 RAPGEF2Q9Y4G8 1499 aa12.22□□□□□ -0.45
HCG18-238ENST00000449544 GOLGA3Q08378 1498 aa12.22□□□□□ -0.45
HCG18-238ENST00000449544 HDGFP51858 240 aaKnown RBP12.21□□□□□ -0.45
HCG18-238ENST00000449544 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.46
HCG18-238ENST00000449544 IGF1RP08069 1367 aa12.17□□□□□ -0.46
HCG18-238ENST00000449544 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
HCG18-238ENST00000449544 SPAG9O60271 1321 aaKnown RBP12.17□□□□□ -0.46
HCG18-238ENST00000449544 URB2Q14146 1524 aaKnown RBP12.17□□□□□ -0.46
HCG18-238ENST00000449544 A0A0G2JS52 829 aa12.16□□□□□ -0.46
HCG18-238ENST00000449544 KIF3BO15066 747 aa12.15□□□□□ -0.46
HCG18-238ENST00000449544 MYT1Q01538 1121 aa12.15□□□□□ -0.46
HCG18-238ENST00000449544 CNGB1Q14028 1251 aaPredicted RBP12.15□□□□□ -0.46
HCG18-238ENST00000449544 SYNJ2O15056 1496 aa12.15□□□□□ -0.46
HCG18-238ENST00000449544 RRP7BPQ9NSQ0 103 aa12.14□□□□□ -0.47
HCG18-238ENST00000449544 LMOD2Q6P5Q4 547 aa12.14□□□□□ -0.47
HCG18-238ENST00000449544 EID1Q9Y6B2 187 aa12.14□□□□□ -0.47
HCG18-238ENST00000449544 WASHC2CQ9Y4E1 1318 aa12.13□□□□□ -0.47
HCG18-238ENST00000449544 NEUROD1Q13562 356 aa12.12□□□□□ -0.47
HCG18-238ENST00000449544 MAGI1Q96QZ7 1491 aaPredicted RBP12.12□□□□□ -0.47
HCG18-238ENST00000449544 KANK1Q14678 1352 aa12.12□□□□□ -0.47
HCG18-238ENST00000449544 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
HCG18-238ENST00000449544 FMN1Q68DA7 1419 aa12.1□□□□□ -0.47
HCG18-238ENST00000449544 HNRNPMP52272 730 aaKnown RBP eCLIP12.1□□□□□ -0.472e-7■□□□□ 10.1
HCG18-238ENST00000449544 FHOD3Q2V2M9 1422 aa12.08□□□□□ -0.48
HCG18-238ENST00000449544 RAPGEF3O95398 923 aa12.07□□□□□ -0.48
HCG18-238ENST00000449544 ZBTB7CA1YPR0 619 aa12.06□□□□□ -0.48
HCG18-238ENST00000449544 PHF23Q9BUL5 403 aaPredicted RBP12.06□□□□□ -0.48
HCG18-238ENST00000449544 SLC24A1O60721 1099 aa12.05□□□□□ -0.48
HCG18-238ENST00000449544 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
HCG18-238ENST00000449544 RGL3Q3MIN7 710 aa12.04□□□□□ -0.48
HCG18-238ENST00000449544 POGZQ7Z3K3 1410 aa12.03□□□□□ -0.48
HCG18-238ENST00000449544 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
HCG18-238ENST00000449544 GRIN2AQ12879 1464 aa12.02□□□□□ -0.49
HCG18-238ENST00000449544 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
HCG18-238ENST00000449544 CUX1P39880 1505 aa12.01□□□□□ -0.49
HCG18-238ENST00000449544 UACAQ9BZF9 1416 aa12□□□□□ -0.49
HCG18-238ENST00000449544 KIAA0586Q9BVV6 1533 aa11.99□□□□□ -0.49
HCG18-238ENST00000449544 CD109Q6YHK3 1445 aa11.98□□□□□ -0.49
HCG18-238ENST00000449544 AFAP1Q8N556 730 aa11.98□□□□□ -0.49
HCG18-238ENST00000449544 POGKQ9P215 609 aa11.97□□□□□ -0.49
HCG18-238ENST00000449544 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
HCG18-238ENST00000449544 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
HCG18-238ENST00000449544 MEX3CQ5U5Q3 659 aaKnown RBP11.96□□□□□ -0.49
HCG18-238ENST00000449544 WDR62O43379 1518 aa11.96□□□□□ -0.5
HCG18-238ENST00000449544 CEP162Q5TB80 1403 aa11.96□□□□□ -0.5
HCG18-238ENST00000449544 CCDC9Q9Y3X0 531 aaKnown RBP11.95□□□□□ -0.5
HCG18-238ENST00000449544 KIF21AQ7Z4S6 1674 aa11.95□□□□□ -0.5
HCG18-238ENST00000449544 CCDC18Q5T9S5 1454 aa11.94□□□□□ -0.5
HCG18-238ENST00000449544 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
HCG18-238ENST00000449544 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
HCG18-238ENST00000449544 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
HCG18-238ENST00000449544 PLB1Q6P1J6 1458 aa11.9□□□□□ -0.5
HCG18-238ENST00000449544 PRDM2Q13029 1718 aa11.89□□□□□ -0.51
HCG18-238ENST00000449544 THEMISQ8N1K5 641 aaPredicted RBP11.88□□□□□ -0.51
HCG18-238ENST00000449544 NEFMP07197 916 aa11.88□□□□□ -0.51
HCG18-238ENST00000449544 NUTM2DQ5VT03 806 aaPredicted RBP11.87□□□□□ -0.51
HCG18-238ENST00000449544 STK26Q9P289 416 aa11.87□□□□□ -0.51
HCG18-238ENST00000449544 TEX14Q8IWB6 1497 aa11.86□□□□□ -0.51
HCG18-238ENST00000449544 SCAPERQ9BY12 1400 aa11.85□□□□□ -0.51
HCG18-238ENST00000449544 ANKLE2Q86XL3 938 aa11.85□□□□□ -0.51
HCG18-238ENST00000449544 ANKRD30AQ9BXX3 1397 aa11.85□□□□□ -0.51
HCG18-238ENST00000449544 CEBPAP49715 358 aaPredicted RBP11.85□□□□□ -0.51
HCG18-238ENST00000449544 ARHGEF11O15085 1522 aa11.84□□□□□ -0.51
HCG18-238ENST00000449544 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
HCG18-238ENST00000449544 ATF3P18847 181 aa11.84□□□□□ -0.51
HCG18-238ENST00000449544 SAFB2Q14151 953 aaKnown RBP eCLIP11.84□□□□□ -0.511e-6■■■□□ 15.2
HCG18-238ENST00000449544 HSPA2P54652 639 aa11.83□□□□□ -0.51
HCG18-238ENST00000449544 ERICH3Q5RHP9 1530 aa11.83□□□□□ -0.52
HCG18-238ENST00000449544 PROSER2Q86WR7 435 aaPredicted RBP11.83□□□□□ -0.52
HCG18-238ENST00000449544 ASXL2Q76L83 1435 aa11.83□□□□□ -0.52
HCG18-238ENST00000449544 TXNDC2Q86VQ3 553 aa11.82□□□□□ -0.52
HCG18-238ENST00000449544 TOP2BQ02880 1626 aa11.82□□□□□ -0.52
HCG18-238ENST00000449544 ACIN1Q9UKV3 1341 aaKnown RBP11.82□□□□□ -0.52
HCG18-238ENST00000449544 UBAP1LF5GYI3 381 aa11.82□□□□□ -0.52
HCG18-238ENST00000449544 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
HCG18-238ENST00000449544 TMC1Q8TDI8 760 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms