RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 CUL7Q14999 1698 aa23.7■■□□□ 1.38
TOM1-211ENST00000449508 RUSC2Q8N2Y8 1516 aa23.69■■□□□ 1.38
TOM1-211ENST00000449508 CARMIL1Q5VZK9 1371 aa23.64■■□□□ 1.37
TOM1-211ENST00000449508 KIAA0586Q9BVV6 1533 aa23.64■■□□□ 1.37
TOM1-211ENST00000449508 NPM1P06748 294 aaKnown RBP eCLIP23.54■■□□□ 1.36
TOM1-211ENST00000449508 TTBK1Q5TCY1 1321 aaPredicted RBP23.45■■□□□ 1.34
TOM1-211ENST00000449508 KIF13AQ9H1H9 1805 aa23.45■■□□□ 1.34
TOM1-211ENST00000449508 ADCY10Q96PN6 1610 aa23.44■■□□□ 1.34
TOM1-211ENST00000449508 PTPRGP23470 1445 aa23.42■■□□□ 1.34
TOM1-211ENST00000449508 CARMIL2Q6F5E8 1435 aa23.42■■□□□ 1.34
TOM1-211ENST00000449508 IQGAP2Q13576 1575 aa23.42■■□□□ 1.34
TOM1-211ENST00000449508 RAPGEF2Q9Y4G8 1499 aa23.42■■□□□ 1.34
TOM1-211ENST00000449508 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
TOM1-211ENST00000449508 MAPKBP1O60336 1514 aa23.37■■□□□ 1.33
TOM1-211ENST00000449508 TNIKQ9UKE5 1360 aa23.37■■□□□ 1.33
TOM1-211ENST00000449508 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
TOM1-211ENST00000449508 DISP1Q96F81 1524 aa23.29■■□□□ 1.32
TOM1-211ENST00000449508 DIP2BQ9P265 1576 aa23.28■■□□□ 1.32
TOM1-211ENST00000449508 UGGT2Q9NYU1 1516 aa23.26■■□□□ 1.31
TOM1-211ENST00000449508 ABCC2Q92887 1545 aa23.24■■□□□ 1.31
TOM1-211ENST00000449508 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
TOM1-211ENST00000449508 UACAQ9BZF9 1416 aa23.23■■□□□ 1.31
TOM1-211ENST00000449508 CTTNBP2Q8WZ74 1663 aa23.22■■□□□ 1.31
TOM1-211ENST00000449508 UHRF1BP1LA0JNW5 1464 aa23.21■■□□□ 1.31
TOM1-211ENST00000449508 TSPOAP1O95153 1857 aa23.19■■□□□ 1.3
TOM1-211ENST00000449508 KIAA0556O60303 1618 aa23.19■■□□□ 1.3
TOM1-211ENST00000449508 PRXQ9BXM0 1461 aa23.18■■□□□ 1.3
TOM1-211ENST00000449508 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
TOM1-211ENST00000449508 PLB1Q6P1J6 1458 aa23.15■■□□□ 1.3
TOM1-211ENST00000449508 GOLGA3Q08378 1498 aa23.11■■□□□ 1.29
TOM1-211ENST00000449508 CSRNP3Q8WYN3 585 aa23.11■■□□□ 1.29
TOM1-211ENST00000449508 KDM5BQ9UGL1 1544 aa23.11■■□□□ 1.29
TOM1-211ENST00000449508 KDM6BO15054 1643 aa23.08■■□□□ 1.28
TOM1-211ENST00000449508 ZCCHC11Q5TAX3 1644 aaKnown RBP23.07■■□□□ 1.28
TOM1-211ENST00000449508 GLI2P10070 1586 aa23.06■■□□□ 1.28
TOM1-211ENST00000449508 P3H3Q8IVL6 736 aa23.01■■□□□ 1.27
TOM1-211ENST00000449508 FAM9AQ8IZU1 332 aaPredicted RBP23.01■■□□□ 1.27
TOM1-211ENST00000449508 EPRSP07814 1512 aaKnown RBP23.01■■□□□ 1.27
TOM1-211ENST00000449508 PPRC1Q5VV67 1664 aaKnown RBP22.98■■□□□ 1.27
TOM1-211ENST00000449508 EEA1Q15075 1411 aa22.98■■□□□ 1.27
TOM1-211ENST00000449508 ABCA8O94911 1581 aa22.97■■□□□ 1.27
TOM1-211ENST00000449508 MAP3K4Q9Y6R4 1608 aa22.94■■□□□ 1.26
TOM1-211ENST00000449508 WDR7Q9Y4E6 1490 aa22.94■■□□□ 1.26
TOM1-211ENST00000449508 KCNH8Q96L42 1107 aa22.93■■□□□ 1.26
TOM1-211ENST00000449508 RANGAP1P46060 587 aaPredicted RBP22.89■■□□□ 1.25
TOM1-211ENST00000449508 TEX14Q8IWB6 1497 aa22.89■■□□□ 1.25
TOM1-211ENST00000449508 ARID3CA6NKF2 412 aa22.88■■□□□ 1.25
TOM1-211ENST00000449508 SAMD9Q5K651 1589 aa22.86■■□□□ 1.25
TOM1-211ENST00000449508 COL17A1Q9UMD9 1497 aaPredicted RBP22.84■■□□□ 1.25
TOM1-211ENST00000449508 CD109Q6YHK3 1445 aa22.82■■□□□ 1.24
TOM1-211ENST00000449508 ATP10BO94823 1461 aa22.82■■□□□ 1.24
TOM1-211ENST00000449508 CFAP43Q8NDM7 1665 aa22.81■■□□□ 1.24
TOM1-211ENST00000449508 KDM4FA0A1W2PPD8 638 aa22.81■■□□□ 1.24
TOM1-211ENST00000449508 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
TOM1-211ENST00000449508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
TOM1-211ENST00000449508 HNRNPUL2Q1KMD3 747 aaKnown RBP22.78■■□□□ 1.24
TOM1-211ENST00000449508 KIF21BO75037 1637 aa22.77■■□□□ 1.24
TOM1-211ENST00000449508 RAPGEF6Q8TEU7 1601 aa22.77■■□□□ 1.24
TOM1-211ENST00000449508 MAGI3Q5TCQ9 1506 aa22.77■■□□□ 1.24
TOM1-211ENST00000449508 EHMT2Q96KQ7 1210 aa22.75■■□□□ 1.23
TOM1-211ENST00000449508 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
TOM1-211ENST00000449508 UBTFP17480 764 aaKnown RBP22.71■■□□□ 1.23
TOM1-211ENST00000449508 NUP153P49790 1475 aaKnown RBP22.68■■□□□ 1.22
TOM1-211ENST00000449508 EFCAB5A4FU69 1503 aa22.66■■□□□ 1.22
TOM1-211ENST00000449508 ABCA9Q8IUA7 1624 aa22.64■■□□□ 1.22
TOM1-211ENST00000449508 ADGRL1O94910 1474 aa22.63■■□□□ 1.21
TOM1-211ENST00000449508 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
TOM1-211ENST00000449508 ARAP3Q8WWN8 1544 aa22.59■■□□□ 1.21
TOM1-211ENST00000449508 PHLDB1Q86UU1 1377 aa22.58■■□□□ 1.21
TOM1-211ENST00000449508 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
TOM1-211ENST00000449508 NEO1Q92859 1461 aa22.53■■□□□ 1.2
TOM1-211ENST00000449508 RAPGEF3O95398 923 aa22.52■■□□□ 1.2
TOM1-211ENST00000449508 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
TOM1-211ENST00000449508 FMN1Q68DA7 1419 aa22.49■■□□□ 1.19
TOM1-211ENST00000449508 CDK13Q14004 1512 aaKnown RBP22.48■■□□□ 1.19
TOM1-211ENST00000449508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.46■■□□□ 1.19
TOM1-211ENST00000449508 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
TOM1-211ENST00000449508 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
TOM1-211ENST00000449508 AKNAQ7Z591 1439 aa22.41■■□□□ 1.18
TOM1-211ENST00000449508 TTC37Q6PGP7 1564 aa22.41■■□□□ 1.18
TOM1-211ENST00000449508 FANCAO15360 1455 aa22.41■■□□□ 1.18
TOM1-211ENST00000449508 DENND4BO75064 1496 aaPredicted RBP22.39■■□□□ 1.17
TOM1-211ENST00000449508 CFAP74Q9C0B2 1584 aa22.38■■□□□ 1.17
TOM1-211ENST00000449508 FRMPD1Q5SYB0 1578 aa22.38■■□□□ 1.17
TOM1-211ENST00000449508 ARID4BQ4LE39 1312 aaPredicted RBP22.34■■□□□ 1.17
TOM1-211ENST00000449508 RICTORQ6R327 1708 aa22.34■■□□□ 1.17
TOM1-211ENST00000449508 PLCH2O75038 1416 aa22.33■■□□□ 1.17
TOM1-211ENST00000449508 LRRIQ1Q96JM4 1722 aa22.31■■□□□ 1.16
TOM1-211ENST00000449508 EFCAB2Q5VUJ9 269 aa22.29■■□□□ 1.16
TOM1-211ENST00000449508 TROQ12816 1431 aaPredicted RBP22.29■■□□□ 1.16
TOM1-211ENST00000449508 MYO5CQ9NQX4 1742 aa22.28■■□□□ 1.16
TOM1-211ENST00000449508 SCAPERQ9BY12 1400 aa22.28■■□□□ 1.16
TOM1-211ENST00000449508 ADAMTSL3P82987 1691 aa22.27■■□□□ 1.16
TOM1-211ENST00000449508 CLIP1P30622 1438 aa22.27■■□□□ 1.16
TOM1-211ENST00000449508 HECW2Q9P2P5 1572 aa22.27■■□□□ 1.16
TOM1-211ENST00000449508 KIF14Q15058 1648 aa22.27■■□□□ 1.16
TOM1-211ENST00000449508 CASKIN1Q8WXD9 1431 aa22.26■■□□□ 1.15
TOM1-211ENST00000449508 BCORL1Q5H9F3 1711 aa22.25■■□□□ 1.15
TOM1-211ENST00000449508 ARHGEF40Q8TER5 1519 aa22.25■■□□□ 1.15
TOM1-211ENST00000449508 ZMYM4Q5VZL5 1548 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms