RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 JPH4Q96JJ6 628 aa30.42■■■□□ 2.46
RFTN1-205ENST00000449415 PRG4Q92954 1404 aaPredicted RBP30.39■■■□□ 2.46
RFTN1-205ENST00000449415 KIAA0586Q9BVV6 1533 aa30.37■■■□□ 2.45
RFTN1-205ENST00000449415 RAPGEF2Q9Y4G8 1499 aa30.33■■■□□ 2.45
RFTN1-205ENST00000449415 IQGAP2Q13576 1575 aa30.22■■■□□ 2.43
RFTN1-205ENST00000449415 CHIC1Q5VXU3 224 aa30.18■■■□□ 2.42
RFTN1-205ENST00000449415 TRHP20396 242 aaPredicted RBP30.16■■■□□ 2.42
RFTN1-205ENST00000449415 PRXQ9BXM0 1461 aa30.16■■■□□ 2.42
RFTN1-205ENST00000449415 CTTNBP2Q8WZ74 1663 aa30.12■■■□□ 2.41
RFTN1-205ENST00000449415 FAM9AQ8IZU1 332 aaPredicted RBP30.12■■■□□ 2.41
RFTN1-205ENST00000449415 CSRNP3Q8WYN3 585 aa30.12■■■□□ 2.41
RFTN1-205ENST00000449415 TTBK1Q5TCY1 1321 aaPredicted RBP30.09■■■□□ 2.41
RFTN1-205ENST00000449415 CARMIL2Q6F5E8 1435 aa30.07■■■□□ 2.4
RFTN1-205ENST00000449415 EEA1Q15075 1411 aa30.06■■■□□ 2.4
RFTN1-205ENST00000449415 UGGT2Q9NYU1 1516 aa30.01■■■□□ 2.4
RFTN1-205ENST00000449415 DISP1Q96F81 1524 aa30.01■■■□□ 2.39
RFTN1-205ENST00000449415 PTPRGP23470 1445 aa30■■■□□ 2.39
RFTN1-205ENST00000449415 TNIKQ9UKE5 1360 aa29.99■■■□□ 2.39
RFTN1-205ENST00000449415 ADCY10Q96PN6 1610 aa29.97■■■□□ 2.39
RFTN1-205ENST00000449415 KIAA0556O60303 1618 aa29.94■■■□□ 2.38
RFTN1-205ENST00000449415 NPM1P06748 294 aaKnown RBP eCLIP29.9■■■□□ 2.38
RFTN1-205ENST00000449415 GOLGA3Q08378 1498 aa29.83■■■□□ 2.37
RFTN1-205ENST00000449415 KIF21BO75037 1637 aa29.82■■■□□ 2.36
RFTN1-205ENST00000449415 EHMT2Q96KQ7 1210 aa29.81■■■□□ 2.36
RFTN1-205ENST00000449415 UACAQ9BZF9 1416 aa29.79■■■□□ 2.36
RFTN1-205ENST00000449415 KIF13AQ9H1H9 1805 aa29.77■■■□□ 2.36
RFTN1-205ENST00000449415 MAPKBP1O60336 1514 aa29.76■■■□□ 2.35
RFTN1-205ENST00000449415 RANGAP1P46060 587 aaPredicted RBP29.75■■■□□ 2.35
RFTN1-205ENST00000449415 P3H3Q8IVL6 736 aa29.75■■■□□ 2.35
RFTN1-205ENST00000449415 ABCC2Q92887 1545 aa29.74■■■□□ 2.35
RFTN1-205ENST00000449415 UHRF1BP1LA0JNW5 1464 aa29.73■■■□□ 2.35
RFTN1-205ENST00000449415 PLB1Q6P1J6 1458 aa29.68■■■□□ 2.34
RFTN1-205ENST00000449415 SAMD9Q5K651 1589 aa29.67■■■□□ 2.34
RFTN1-205ENST00000449415 FAM69CQ0P6D2 419 aa29.66■■■□□ 2.34
RFTN1-205ENST00000449415 ABCC10Q5T3U5 1492 aa29.66■■■□□ 2.34
RFTN1-205ENST00000449415 UBTFP17480 764 aaKnown RBP29.64■■■□□ 2.34
RFTN1-205ENST00000449415 DIP2BQ9P265 1576 aa29.64■■■□□ 2.33
RFTN1-205ENST00000449415 ZCCHC11Q5TAX3 1644 aaKnown RBP29.62■■■□□ 2.33
RFTN1-205ENST00000449415 ABCA8O94911 1581 aa29.61■■■□□ 2.33
RFTN1-205ENST00000449415 KDM5BQ9UGL1 1544 aa29.61■■■□□ 2.33
RFTN1-205ENST00000449415 ASXL2Q76L83 1435 aa29.59■■■□□ 2.33
RFTN1-205ENST00000449415 FHOD3Q2V2M9 1422 aa29.53■■■□□ 2.32
RFTN1-205ENST00000449415 TSPOAP1O95153 1857 aa29.53■■■□□ 2.32
RFTN1-205ENST00000449415 ARID3CA6NKF2 412 aa29.49■■■□□ 2.31
RFTN1-205ENST00000449415 EFCAB5A4FU69 1503 aa29.48■■■□□ 2.31
RFTN1-205ENST00000449415 RAPGEF6Q8TEU7 1601 aa29.45■■■□□ 2.31
RFTN1-205ENST00000449415 EPRSP07814 1512 aaKnown RBP29.4■■■□□ 2.3
RFTN1-205ENST00000449415 GLI2P10070 1586 aa29.4■■■□□ 2.3
RFTN1-205ENST00000449415 WDR7Q9Y4E6 1490 aa29.4■■■□□ 2.3
RFTN1-205ENST00000449415 ATP10BO94823 1461 aa29.37■■■□□ 2.29
RFTN1-205ENST00000449415 ARHGAP35Q9NRY4 1499 aa29.35■■■□□ 2.29
RFTN1-205ENST00000449415 KCNH8Q96L42 1107 aa29.34■■■□□ 2.29
RFTN1-205ENST00000449415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.32■■■□□ 2.28
RFTN1-205ENST00000449415 HNRNPUL2Q1KMD3 747 aaKnown RBP29.32■■■□□ 2.28
RFTN1-205ENST00000449415 PPRC1Q5VV67 1664 aaKnown RBP29.31■■■□□ 2.28
RFTN1-205ENST00000449415 NUP153P49790 1475 aaKnown RBP29.31■■■□□ 2.28
RFTN1-205ENST00000449415 MAP3K4Q9Y6R4 1608 aa29.31■■■□□ 2.28
RFTN1-205ENST00000449415 KDM6BO15054 1643 aa29.24■■■□□ 2.27
RFTN1-205ENST00000449415 ATP1B4Q9UN42 357 aaPredicted RBP29.21■■■□□ 2.27
RFTN1-205ENST00000449415 FMN1Q68DA7 1419 aa29.2■■■□□ 2.27
RFTN1-205ENST00000449415 CFAP43Q8NDM7 1665 aa29.2■■■□□ 2.26
RFTN1-205ENST00000449415 CD109Q6YHK3 1445 aa29.16■■■□□ 2.26
RFTN1-205ENST00000449415 CDK13Q14004 1512 aaKnown RBP29.15■■■□□ 2.26
RFTN1-205ENST00000449415 TEX14Q8IWB6 1497 aa29.14■■■□□ 2.26
RFTN1-205ENST00000449415 HECW1Q76N89 1606 aa29.13■■■□□ 2.25
RFTN1-205ENST00000449415 CLIP1P30622 1438 aa29.11■■■□□ 2.25
RFTN1-205ENST00000449415 PLEKHD1A6NEE1 506 aa29.11■■■□□ 2.25
RFTN1-205ENST00000449415 ABCA9Q8IUA7 1624 aa29.09■■■□□ 2.25
RFTN1-205ENST00000449415 MAGI3Q5TCQ9 1506 aa29.07■■■□□ 2.24
RFTN1-205ENST00000449415 LRRIQ1Q96JM4 1722 aa29.05■■■□□ 2.24
RFTN1-205ENST00000449415 PCF11O94913 1555 aaKnown RBP29.04■■■□□ 2.24
RFTN1-205ENST00000449415 COL17A1Q9UMD9 1497 aaPredicted RBP29.03■■■□□ 2.24
RFTN1-205ENST00000449415 LOC105371045A0A1W2PR82 267 aa29.01■■■□□ 2.23
RFTN1-205ENST00000449415 CASKIN1Q8WXD9 1431 aa28.96■■■□□ 2.23
RFTN1-205ENST00000449415 CEP162Q5TB80 1403 aa28.94■■■□□ 2.22
RFTN1-205ENST00000449415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.94■■■□□ 2.22
RFTN1-205ENST00000449415 TTC37Q6PGP7 1564 aa28.92■■■□□ 2.22
RFTN1-205ENST00000449415 CDK11AQ9UQ88 783 aaPredicted RBP28.92■■■□□ 2.22
RFTN1-205ENST00000449415 FYCO1Q9BQS8 1478 aa28.89■■■□□ 2.22
RFTN1-205ENST00000449415 CCDC18Q5T9S5 1454 aa28.86■■■□□ 2.21
RFTN1-205ENST00000449415 KIF14Q15058 1648 aa28.86■■■□□ 2.21
RFTN1-205ENST00000449415 TROQ12816 1431 aaPredicted RBP28.85■■■□□ 2.21
RFTN1-205ENST00000449415 NEO1Q92859 1461 aa28.83■■■□□ 2.21
RFTN1-205ENST00000449415 ARAP3Q8WWN8 1544 aa28.83■■■□□ 2.21
RFTN1-205ENST00000449415 PHLDB1Q86UU1 1377 aa28.79■■■□□ 2.2
RFTN1-205ENST00000449415 FANCAO15360 1455 aa28.78■■■□□ 2.2
RFTN1-205ENST00000449415 MYO5CQ9NQX4 1742 aa28.78■■■□□ 2.2
RFTN1-205ENST00000449415 CFAP74Q9C0B2 1584 aa28.76■■■□□ 2.19
RFTN1-205ENST00000449415 AEBP2Q6ZN18 517 aaPredicted RBP28.76■■■□□ 2.19
RFTN1-205ENST00000449415 RAPGEF3O95398 923 aa28.75■■■□□ 2.19
RFTN1-205ENST00000449415 AKNAQ7Z591 1439 aa28.74■■■□□ 2.19
RFTN1-205ENST00000449415 PLCH2O75038 1416 aa28.73■■■□□ 2.19
RFTN1-205ENST00000449415 FRMPD1Q5SYB0 1578 aa28.68■■■□□ 2.18
RFTN1-205ENST00000449415 DENND4BO75064 1496 aaPredicted RBP28.66■■■□□ 2.18
RFTN1-205ENST00000449415 ARHGAP5Q13017 1502 aa28.65■■■□□ 2.18
RFTN1-205ENST00000449415 RICTORQ6R327 1708 aa28.65■■■□□ 2.18
RFTN1-205ENST00000449415 EFCAB2Q5VUJ9 269 aa28.64■■■□□ 2.18
RFTN1-205ENST00000449415 CDC42BPBQ9Y5S2 1711 aa28.63■■■□□ 2.17
RFTN1-205ENST00000449415 KDM4FA0A1W2PPD8 638 aa28.63■■■□□ 2.17
RFTN1-205ENST00000449415 ADGRL1O94910 1474 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms